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Schistosoma mansoni
cluster # 11162 cluster # 11162       Sequences # 37       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11162#0 length = 1100 sequences # 7  
consensus_11162#1 length = 1068 sequences # 26  
consensus_11162#2 length = 732 sequences # 2  
consensus_11162#3 length = 589 sequences # 2  

consensusID : consensus_11162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1100
fasta sequence
                              [GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCAATGAGTGGTCGGAGGTAAATATTGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACAGGGCTTATATTCAACATCCC]

[+] EMBL CD095355             [GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCAATGAGTGGTCGGAGGTAAATATTGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCTACATTTTTGATTTATATACAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD095341             [GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGGCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCAATGAGTGGTCGGAGGTAAATATTGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD094512             [                                                                                                                                                                           CAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCAATGAGTGGTCGGAGGTAAATATTGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD161291             [                                                                                                                                                                                                                                                                                                                                                                                                                                  ATTGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCATTGATCTTTGAATATGAACCCTCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGCGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCACTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCANGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGC                                                                     ]
[+] EMBL CD186160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACAGGGCTTATATTCAACATCCC]
[+] EMBL CD186221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACAGGGCTTATATTCAACATCCC]
[+] EMBL CD068623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 tGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACAGGGCTTATATTCAACA    ]


>consensus_11162#0 GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTG TACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAA TATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATT TCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTA ATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCT TCACTTAAATAGACAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAA TGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCAATGAGTGGTCGGAGGTAAATAT TGTACATCAGATGGTGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCT GTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGAT TTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCA GGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGA CTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAA TCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGA AATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGA TTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAAC AAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCAT TTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGC ACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACA GGGCTTATATTCAACATCCC



consensusID : consensus_11162#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 26
consensus length = 1068
fasta sequence
                              [TCACTTCCACAACAANAATGCAGTAAGTAATGTTGGTTATGTATTATGTTCAAATTTATAGATTTAACTATGATAAAATAACAAAAACTGTCTATATTTACAAAAACAATAAAAGATCACAATAATTAACGAACTACTTTATGAAAACAAGAACAAAGTTCATACTAAAACTCAAAAAAAGAAAAATCTTTGTACTCCACATCATAAATTTTACCTTTATTGTATCTTGTTCCTCATCATTTTCATTTTCTGATGGTAACATAGAAGTGGCCATCAACTGATTGAACCGAGTTTTCTTAGCTGCTTGTGCAGCGTACAACTGCCATTTGAATAGAGATAAAGGTGCTAAAGTAATATGAATTGGTAGTATTGGTGTAGTTTCATTCACTGGTTTATAATCTTCATTTAGATTCCAATAATCACTCAGATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCA--ATGCGTCCTCGGAGGTAAATATTGTACATCAGATGG-TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG-AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA-CTGAT-CTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTAAAAATATGGAACGCTTCACGATTNTGCGT]

[-] EMBL CD124962             [TCACTTCCACAACAANAATGCAGTAAGTAATGTTGGTTATGTATTATGTTCAAATTTATAGATTTAACTATGATAAAATAACAAAAACTGTCTATATTTACAAAAACAATAAAAGATCACAATAATTAACGAACTACTTTATGAAAACAAGAACAAAGTTCATACTAAAACTCAAAAAAAGAAAAATCTTTGTACTCCACATCATAAATTTTACCTTTATTGTATCTTGTTCCTCATCATTTTCATTTTCTGATGGTAACATAGAAGTGGCCATCAACTGATTGAACCGAGTTTTCTTAGCTGCTTGTGCAGCGTACAACTGCCATTTGAATAGAGATAAAGGTGCTAAAGTAATATGAATTGGTAGTATTGGTGTAGTTTCATTCACTGGTTTATAATCTTCATTTAGATTCCAATAATCACTCAGATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD064275             [                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAAATTGATCC AAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTT GATGCCATGATGCGTCCTCGAAGttgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD166883             [                                                                                                                                                                                                                                                                                                                                                                                                                                           ATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAAATTGATCCAAAGGAACTGGGACAGAACC TTAACCCATGGAGAATGGTCATCTACTAAGTT ATAGTTAGATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD094923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGATAAATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAGTTAGATTTGGATGCCA  ATGAGTGGTCGGAGGTAAATATTGTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTAAAAATATGGAACGCTTCACGATTNTGCGT]
[-] EMBL CD201187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     caCGGAGGTAAATATTGTACATCAGATGG TGTTGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTATGGGATAAAGTACGACGTTTGTAACGCGTCCACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGTAGAAACCAGGTTTAACCAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[+] EMBL CD150698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[+] EMBL CD151592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[+] EMBL CD150708             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGACGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGANTNAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[+] EMBL CD144545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGA TAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[+] EMBL CD071791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[+] EMBL CD150711             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAAAAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACGTAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]
[-] EMBL CD113187             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113231             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113188             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTCGGGAAACTGACTGCAATGAATTTAAGCTGATACTTTGAATca                                                                                                                                                                                                                            ]
[-] EMBL CD150742             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAGCAAAATATACATGTATATACAATGAACCATTGAACATGAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD201146             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD201147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD201168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD201175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113266             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACTAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACAGGATAAACGACGGCGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD151589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCCGTGTTTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG TGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[-] EMBL CD113172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACATCAGATGG TGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAAT                                                                                                                                                                                                                              ]
[+] EMBL CD113247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tgCATCAGATGGATGTCGAAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTG AGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCA CTGAT CTTTGAA                                                                                                                                                                                                                               ]


>consensus_11162#1 TCACTTCCACAACAANAATGCAGTAAGTAATGTTGGTTATGTATTATGTTCAAATTTATA GATTTAACTATGATAAAATAACAAAAACTGTCTATATTTACAAAAACAATAAAAGATCAC AATAATTAACGAACTACTTTATGAAAACAAGAACAAAGTTCATACTAAAACTCAAAAAAA GAAAAATCTTTGTACTCCACATCATAAATTTTACCTTTATTGTATCTTGTTCCTCATCAT TTTCATTTTCTGATGGTAACATAGAAGTGGCCATCAACTGATTGAACCGAGTTTTCTTAG CTGCTTGTGCAGCGTACAACTGCCATTTGAATAGAGATAAAGGTGCTAAAGTAATATGAA TTGGTAGTATTGGTGTAGTTTCATTCACTGGTTTATAATCTTCATTTAGATTCCAATAAT CACTCAGATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAAATTGAT CCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGTTAATAG TTAGATTTGGATGCCAATGCGTCCTCGGAGGTAAATATTGTACATCAGATGGTGTCGAAG AACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTTGTGGTACGGG ATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTG AATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTA TATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCT TTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTT CATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAAT AGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTT TACTTGGATCCATCTGGTAAAAATATGGAACGCTTCACGATTNTGCGT



consensusID : consensus_11162#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 732
fasta sequence
                              [ACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAGGTAGTGTCAGGCATTNTGAACTTTGAGTTTACAGGTATAAAACAGGGCTTATAATCAACA]

[+] EMBL CD168847             [ACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACGACCTCTGCAGAGGTAGTGTCAGGCATTNTGAACTTTGAGTTTACAGGTATAAAACAGGGCTTATAATCAACA]
[+] EMBL CD168171             [                                                                                                                                                     ACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTGAGCAGACGGTAAGCAAATGCCTTCAACATTCCCCATTTGTTTGGTTGGGCTTGTTGTTGTTGAA                                                                                                           ]


>consensus_11162#2 ACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTA CTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGACAAAGTATGCTGTG ATTAGATTTGTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTA TATACAGTGTACTTCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGT TTAACAAAATATACATGTATATACAATGAACCATTGAACATAAGGTTGGGAAACTGACTG CAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATCC CCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAATGAAAT GTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGATTT GTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAACAAG TTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCATTTG TTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGCACG ACCTCTGCAGAGGTAGTGTCAGGCATTNTGAACTTTGAGTTTACAGGTATAAAACAGGGC TTATAATCAACA



consensusID : consensus_11162#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 589
fasta sequence
                              [TATCTGAATGATTATTGGAATCTAAATGAAGATTATAAACCAGTGAATGAAACTACACCAATACTACCAATTCATATTACTTTAGCACCTTTAT-CTCTATTCAAATGGCAGTTGTACGCTGCACAAACAGCTAAGAAAACTTGGTTCAATCAGTTGATGGCCACTTCTATGTTACCATCAGAAAATGAAAATGATGAGGAACAAGATACAATAAAGAAAGCACTGATCGAAACAAATCCTTTGCTTTTAGCTGTAACAGTTGTCGTATCAATTGTCCATAGTGTTTTTGAATTGTTAGCATTTAAAAATGATATACAATTTTGGAAAACAAGAGAATCCTTAGAAGGTCTCTCAGTTCGCTCTGTATTTTTCAATGTCTTCCAGTCATTCATTGTTGTGCTGTACGTACTTGATAACGATACCAATTTTGTTATAAAACTATCAGTTGTTTTTGGACTGTTAATTGAGATCTGGAAAATCAAGAAAGTCCCTTCTTTCAGATTTAATTATGATTCGTTGATATTCAATGTATTTCCACGTATTCATGTGGATTACCAATCATCATACGTAGAAAGTGATACCAAAAAAT]

[+] EMBL CD201912             [TATCTGAATGATTATTGGAATCTAAATGAAGATTATAAACCAGTGAATGAAACTACACCAATACTACCAATTCATATTACTTTAGCACCTTTAT CTCTATTCAAATGGCAGTTGTACGCTGCACAAACAGCTAAGAAAACTTGGTTCAATCAGTTGATGGCCACTTCTATGTTACCATCAGAAAATGAAAATGATGAGGAACAAGATACAATAAAGAAAGCACTGATCGAAACAAATCCTTTGCTTTTAGCTGTAACAGTTGTCGTATCAATTGTCCATAGTGTTTTTGAATTGTTAGCATTTAAAAATGATATACAATTTTGGAAAACAAGAGAATCCTTAGAAGGTCTCTCAGTTCGCTCTGTATTTTTCAATGTCTTCCAGTCATTCATTGTTGTGCTGTACGTACTTGATAACGATACCAATTTTGTTATAAAACTATCAGTTGTTTTTGGACTGTTAATTGAGATCTGGAAAATCAAGAAAGTCCCTTCTTTCAGATTTAATTATGATTCGTTGATATTCAATGTATTTCCACGTATTCATGTGGATTACCAATCATCATACGTAGAAAGTGATACCAAAAAAT]
[-] EMBL CD111889             [                                                                           ATTACTTTAGCACC TTATNCTCTATTCAAATGGCAGTTGTACGCTGCACAAACAGCTAAGAAAACTTGGTTCAATCAGTTGATGGCCACTTCTATGTTACCATCAGAAAATGAAAATGATGAGGAACAAGATACAATAAAGAAAGCACTGATCGAAACAAATCCTTTGCTTTTAGCTGTAACAGTTGTCGTATCAATTGTCCATTGTGTTTTTGAATTGTTAGCATTTAAAAATGATATACAATTTTGGAAAACAAGAGAATCCT                                                                                                                                                                                                                                                         ]


>consensus_11162#3 TATCTGAATGATTATTGGAATCTAAATGAAGATTATAAACCAGTGAATGAAACTACACCA ATACTACCAATTCATATTACTTTAGCACCTTTATCTCTATTCAAATGGCAGTTGTACGCT GCACAAACAGCTAAGAAAACTTGGTTCAATCAGTTGATGGCCACTTCTATGTTACCATCA GAAAATGAAAATGATGAGGAACAAGATACAATAAAGAAAGCACTGATCGAAACAAATCCT TTGCTTTTAGCTGTAACAGTTGTCGTATCAATTGTCCATAGTGTTTTTGAATTGTTAGCA TTTAAAAATGATATACAATTTTGGAAAACAAGAGAATCCTTAGAAGGTCTCTCAGTTCGC TCTGTATTTTTCAATGTCTTCCAGTCATTCATTGTTGTGCTGTACGTACTTGATAACGAT ACCAATTTTGTTATAAAACTATCAGTTGTTTTTGGACTGTTAATTGAGATCTGGAAAATC AAGAAAGTCCCTTCTTTCAGATTTAATTATGATTCGTTGATATTCAATGTATTTCCACGT ATTCATGTGGATTACCAATCATCATACGTAGAAAGTGATACCAAAAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11162#0      ------------------------------------------------------------
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      TCACTTCCACAACAANAATGCAGTAAGTAATGTTGGTTATGTATTATGTTCAAATTTATA 60
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      ------------------------------------------------------------
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      GATTTAACTATGATAAAATAACAAAAACTGTCTATATTTACAAAAACAATAAAAGATCAC 120
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      -----------------------------------------GTGGTACGGGATAAACGAC 19
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      AATAATTAACGAACTACTTTATGAAAACAAGAACAAAGTTCATACTAAAACTCAAAAAAA 180
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      GACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTGTACTTCAGTGAATAGTTAT 79
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      GAAAAATCTTTGTACTCCACATCATAAATTTTACCTTTATTGTATCTTGTTCCTCATCAT 240
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      TGCCCGTATTTGGATCTGGTG-AGAAACCAGGTTTAACAAAATATACATGTATATACAAT 138
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      TTTCATTTTCTGATGGTAACATAGAAGTGGCCATCAACTGATTGAACCGAGTTTTCTTAG 300
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      GAACCATTGAACATAAGGTTGGGAAACTGACTGCAATGAATTTCACTGATCTTTGAATAT 198
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      CTGCTTGTGCAGCGTACAACTGCCATTTGAATAGAGATAAAGGTGCTAAAGT---AATAT 357
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      GAACCATCTCCGTCTGGCCCGCCATTCCAATCCCCATACGTAATATTGGGTTCATACCAA 258
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      GAATTGGTAGTATTGG---TGTAGTTTCATTCACTGGTTTATAATCTTCATTTAGATTCC 414
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      AATAAAGCATTAGAGTTATTAAAAGAATGAAATGTTGGATCTTCACTTAAA--TAGACAA 316
consensus_11162#2      ------------------------------------------------------------
consensus_11162#1      AATAATCACTCAGATAAACAACGGGATAATATTCATTGGTCGGCGAATAAAACTCGATAA 474
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      ATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGT 376
consensus_11162#2      --------------------------------------------------ACAAATAAAT 10
consensus_11162#1      ATTGATCCAAAGGAACTGGGACAGAACCTTTAACCCATGGAGAATGGTCATCAACTAAGT 534
consensus_11162#3      ---------------TATCTGAATGATTATTGGAATCTAAATGAAGATTATAAACCA-GT 44
                                                                           **  *  *

consensus_11162#0      TAATAGTTAGATTTGGATGCCAATGAGTGGTCG--GAGGTAAATATTGTACATCAGATGG 434
consensus_11162#2      CCATCAGAGAACCCGACTGATAAAGATTTGTAGCTGGGATAACCGTTTTACTTGGATCCA 70
consensus_11162#1      TAATAGTTAGATTTGGATGCCAATGCGTCCTCG--GAGGTAAATATTGTACATCAGATGG 592
consensus_11162#3      GAATGAAACTACACCAATACTACCAATTCATAT-TACTTTAGCACCTTTATCTCTATTCA 103
                         **      *      *   *     *  *        **     * **  *       

consensus_11162#0      TGTCG--AAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTT 492
consensus_11162#2      TCTGGTTAGGTGATGGACGACGAAACAAGTTGAGGA-CAAAGTATGCTGTGATTAGATTT 129
consensus_11162#1      TGTCG--AAGAACCAGCTACCAAATCTGGATGAGAATCAGTATGACCTGTGATTAGATTT 650
consensus_11162#3      AATGGC-AGTTGTACGCTGCACAAAC-AGCTAAGAA-AACTTGGTTCAATCAGTTGATGG 160
                         * *  *       *      ** *  * * ** *  *       *  * * * ***  

consensus_11162#0      GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTG 552
consensus_11162#2      GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTG 189
consensus_11162#1      GTGGTACGGGATAAACGACGACGTTTGTAACGCGTCAACATTTTTGATTTATATACAGTG 710
consensus_11162#3      CCACTTCTATGTTACCATCAGAAAATGAAAATGATGAGGAACAAGATACAATAAAGAAAG 220
                           * *    * * *  *      ** **    * *  *          *** * *  *

consensus_11162#0      TACT--TCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAA 610
consensus_11162#2      TACT--TCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAA 247
consensus_11162#1      TACT--TCAGTGAATAGTTATTGCCCGTATTTGGATCTGGTGAGAAACCAGGTTTAACAA 768
consensus_11162#3      CACTGATCGAAACAAATCCTTTGCTTTTAGCTGTAACAGTTGTCGTATCAA-TTGTCCAT 279
                        ***  **     * *    ****   **  ** * * * **    * **  **   ** 

consensus_11162#0      AATATACATG---TATATACAATGAACCATTGAACATAAGGTTGGGAAACTGA-----CT 662
consensus_11162#2      AATATACATG---TATATACAATGAACCATTGAACATAAGGTTGGGAAACTGA-----CT 299
consensus_11162#1      AATATACATG---TATATACAATGAACCATTGAACATAAGGTTGGGAAACTGA-----CT 820
consensus_11162#3      AGTGTTTTTGAATTGTTAGCATTTAAAAATGATATACAATTTTGGAAAACAAGAGAATCC 339
                       * * *   **   * *   ** * **  **   * * **  **** ****        * 

consensus_11162#0      GCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATC 722
consensus_11162#2      GCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATC 359
consensus_11162#1      GCAATGAATTTCACTGATCTTTGAATATGAACCATCTCCGTCTGGCCCGCCATTCCAATC 880
consensus_11162#3      TTAGAAGGTCTCTCAGTTCGCTCTGTATTTTTCAATGTCTTCCAGTCATTCATTGTTGTG 399
                         *     * ** * * **  *   ***    **    * **  * *   ****    * 

consensus_11162#0      CCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAAT--GA 780
consensus_11162#2      CCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAAT--GA 417
consensus_11162#1      CCCATACGTAATATTGGGTTCATACCAAAATAAAGCATTAGAGTTATTAAAAGAAT--GA 938
consensus_11162#3      CT-GTACGTACT-TGATAACGATACCAATTT--TGTTATAAAACTATCAGTTGTTTTTGG 455
                       *   ****** * *       *******  *   *   ** *  *** *   *  *  * 

consensus_11162#0      AATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGA 840
consensus_11162#2      AATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGA 477
consensus_11162#1      AATGTTGGATCTTCACTTAAATAGACAAATAAATCCATCAGAGAACCCGACTGATAAAGA 998
consensus_11162#3      ACTGTTA-ATTGAGATCTGGAAAATCAAGAAAGTCCCTTCTT--TCAGATTTAATTATGA 512
                       * ****  **    *  *  * *  ***  ** *** *       *     * ** * **

consensus_11162#0      TTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAAC 900
consensus_11162#2      TTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTTAGGTGATGGACGACGAAAC 537
consensus_11162#1      TTTGTAGCTGGGATAACCGTTTTACTTGGATCCATCTGGTAAAAATATGGAACGCTTCAC 1058
consensus_11162#3      TTCGTTGATATT-CAATGTATTTCCACGTATTCATGTGGATTACCAATCATCATACGTAG 571
                       ** ** * *     **    *** *  * ** *** ***       **          * 

consensus_11162#0      AAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCAT 960
consensus_11162#2      AAGTTGAGGACAAAGTATGCTGTGAGCAGACGGAAAGCAAATGCCTTCAACATTCCCCAT 597
consensus_11162#1      GATTNTGCGT-------------------------------------------------- 1068
consensus_11162#3      AAAGTGATACCAAAAAAT------------------------------------------ 589
                        *                                                          

consensus_11162#0      TTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGC 1020
consensus_11162#2      TTGTTTGGTTGGGCTTGTTGTTGTTGAACAGCAGGTGTTCCTGTTGCACCAACGGCTGGC 657
consensus_11162#1      ------------------------------------------------------------
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      ACGACCTCTGCAGAAGTAGTGTCAGGCATTTTGAACTTTGAAGTTTACAGGTATAAAACA 1080
consensus_11162#2      ACGACCTCTGCAGAGGTAGTGTCAGGCATTNTGAACTTTGA-GTTTACAGGTATAAAACA 716
consensus_11162#1      ------------------------------------------------------------
consensus_11162#3      ------------------------------------------------------------
                                                                                   

consensus_11162#0      GGGCTTATATTCAACATCCC 1100
consensus_11162#2      GGGCTTATAATCAACA---- 732
consensus_11162#1      --------------------
consensus_11162#3      --------------------
                                           




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)