|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11169#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 29 consensus length = 1751 fasta sequence
[CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCCCTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTTCTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATAACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAACAGA-CCACATATACC-AAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGT-ATCAATAATAATAG-TCCAAGGTCAAAATAAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA-CTATCCAATA-GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT-ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA-TAGCCAAGTTACTATTAATGCGATATG-TTTGTCACA-TTTAACAGGGAATGCATTAG-AACTGA-AGAGAT-CATGAGGATCGACGACATTTGATTCGAGGTCA-CCAACATTTGATTCTTCTGAAATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA-TTCTTGA-TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA--TTTTTTT--ATGCA---AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGAAATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGTTATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAA]
[-] EMBL AI977260 [CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCCCTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTTCTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATAACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAACAGA CCACATATACC AAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGTAATCAATAATAATAGTTCCAAGGTCAAAATAAAGG ]
[-] EMBL CD185823 [ AATCATTATTCACAAGCACACTGGGTTATATATACTAACCAAACAGACCCAATTATACCAAAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCTGTAGCTAGGGGGAAAGTAATCAATAATAATAGTTCCAAGGTCAAAACAAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA CTATCCAATAGGGAATGGGCATATTGTATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACTATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGACTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGTTGAT GTCCGTATTTTTAATTTCCTCGAAT ]
[+] EMBL CD126221 [ GGGAAAGT ATCAATAATAATAG TCCAAGGTCAAAATAAAGGTTATGATAAGAGGAACACAGAAACGATTAGGTCACTTATTTAACAAGCTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACTTCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGAGATACAACAGCTCCCCTTTTTGAGAAATCCGGGGTTGATGATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCGCACTAAAGACTGTTGGATCCTCATA TAGCCGAGTTACTATTAATGCGATACG TTTGTCACATTTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCACCCAACATTTGATTCTTCTGAAATAGTTTCTTTGAATT ]
[+] EMBL CD139626 [ AAAGGTTGTGATAAGAGGAACACGGAAACGATTAGGTCACTTATTTAACAA CTATCCAATAGGGAATGGGCATATTGTATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACTATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGACTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGATGAT GTCCGTATTTTTAATTTCCTCGAATTCACCCTCGCTCACGAAAGACTGTTGGATCCTCATA TAGCCAGGTTACTATTAATGCGATATG TTTGTCACC TTTAACAGGGAATGCATCAGAAACTGAGAGA AT CATGA GATCGACGA ]
[-] EMBL CD145817 [ TGATAAGAGGAACACGGAAACGACTAGGTCACTTATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTC ]
[+] EMBL CD151951 [ TTATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCGGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATANTAGCC AGTTACTATTAATGCGATATGTTTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGTAATAGTTTCTTTG ]
[-] EMBL CD151902 [ TATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTCTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGTAATAGTTTCTTTGA ]
[-] EMBL CD151958 [ TATTTAACAA CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGAAATAGTTTCTTTGA ]
[-] EMBL CD141673 [ an CTATCCAATA GGAATAGGCATATTATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGAATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGAT ATCCGGATTTTAAATTTTCTCGGATTCACCCTCCCCCACGAAAGACTGTTGGATCCTCATA TAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCGGCGACATTTGATTCGAGGTCA CCAACATTTGATTC ]
[-] EMBL CD147584 [ GGACCTCAGATTTATGATTCATAATTCGCCAGGGGATACAACACCTCCCCTTTTTGAGAAATCCGGAGTTGAT ATCCGGATTTTAAA TTTCTCGAATTCACCCTCCCCCACGAAAGACTGTTGGATCCTTATA TAGCCAAGTTACTATTAATGCGATATG TTCGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGATTCGACGACATTTGATTCGAGGTCA CCA ]
[+] EMBL CD144430 [ AGACTGTTGGATCCTCATA CAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGATCCATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATCTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAG ]
[-] EMBL CD118319 [ TGTTGGATCCTCATA CAGCCAAGTTACTATTAATGCGATATG TTTGTCACA TTTAACAGGGAATGCATTAG AACTGA AGAGAT CATGAGGATCAACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCCCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCT ]
[-] EMBL CD167586 [ GAATGCATTAG AACTGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCA TAGATTCATTAGAAACATTTTTCGTATCATGATTAAT ]
[-] EMBL AW017138 [ TGA AGAGAT CATGAGGATCGACGACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGAAATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAAATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCG ]
[+] EMBL CD069712 [ ACATTTGATTCGAGGTCA CCAACATTTGATTCTTCTGATATAGTTTCCTTGAATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAGTTGTATTGGA TTCTTGA CTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGGAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTCCGTATCATGATTAAATTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTCCCGTTTCTTCGTGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACTTTTTGTTTCAGGGTTA ]
[-] EMBL CD137805 [ TAGTAGATAATGAATCATTAGGATAATCAGTATCTATGAGAG TGTATTGGATTTCTTGA TTATCATTTAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTTCGCGTGT ]
[-] EMBL CD139601 [ tcTGATTTATCATTNAATACATCTGACATTTTTCTCTCATTTTTATAAGAGAATTCAACAGGAACATATGAATCAGCGAAATAATCGGGATCTGGCAGAACAATTAGATAATCTTGATCATTAGATTCATTAGAAACATTTTCCGTATCATGATTAAATTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGTTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTTGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAg ]
[-] EMBL CD139655 [ GAAACATATGAATCATCAAAATAATCTAAATCTGGTAGAACAATTACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTGATGGCGCTTAGTAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGCACTGGGCTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGTCGG ]
[-] EMBL AI975631 [ ATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTCATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGGTACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCAAGTATCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCGTGCATAACTGCTGCATTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTT ]
[+] EMBL CD180071 [ GATTCATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGTATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCACCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGTAATTAATGCGTCAACTTCCGTTGCACCCNCGAAGCATGGGTGATTCAGCAG ]
[-] EMBL CD142708 [ ATTGCTCGCAC TTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTTCACTCCCAAAGCAAGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAA ]
[+] EMBL CD200817 [ CTCACACGTTTTGTTTCAGGGTTAATAAAACTTGAACCGTGTACAGGGCGTGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAATCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCT ]
[-] EMBL CD170317 [ ACTTGGACCGTGTACAGGGCATGTCTCTGAAACAGGTAGTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAGTTATTGCTTTGTATGGATTCACTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAACCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGT ]
[-] EMBL CD132449 [ CTGGAACAGGTAGTACTGGGTTACTGGACTGATCATGTATAACTGCTGCGCTTAAATTATTGCTTTGTATGGAGTCATTGAGGCTTTCGCCGGCATATTCAATAGTTCTGTAATTGTTTTCCAGCTCTGTACGCAATTTTGAAATTATTGAGTCAACTTCCGTTTCACTCCCAAAGCATGGGTGATTCAGCAGCTTCGCGTGTAATTTGTCAATGAAATCCAATTGACTCTTTCTGAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGGTCGGAAGTTAAGGCCA TTTTTTTAAATGTA AATAATAATAATAAATCCAAAAAA ]
[+] EMBL CD117322 [ GATCGTGCATAACTGCTGCATTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTT ]
[-] EMBL CD161037 [ ACTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAATTGGAAATCAATGCGTCAACTTCCGTTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA TTTTTTT ATGCA AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGAAATGACGTCAGCGGCTGCTGTATTT ]
[-] EMBL CD181506 [ CTGCTGCGCTTAAATTATTGCTTTGTATGGATTCATTGAGGCTTCCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCGAAGCATGGGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCCAAAGCGCTGCTCTTGTCGCTGGATTAG ]
[-] EMBL CD181275 [ CTGCTGCGCTTAAGTANTTGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTTCCAGCTCTGTACGCAAAATGGAAATCAATGCGTCAACTTCCGGTGCACCCCCAAAGCATGGGTGATTCAGCAGCGTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCATTTTTTTTT ATGCAAATAATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCC ]
[-] EMBL CD184108 [ AAGCGCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCA TTTTTTT ATGCA AATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCAAAATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGTTATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAA]
consensusID : consensus_11169#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 814 fasta sequence
[TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCCTGTCTGTAAACCATTTTTGTTCTGCTGCTGACCCCATAAACAATTATTATTTAACGGCTGTGTTCTGATTTATTGGAGTTGGGGAACAGTATTGGGGTAGAGCTAGGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACCCTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTATACTAGGTAGGATCCGGTT]
[+] EMBL CD145247 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCCTGTCT ]
[+] EMBL CD145349 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGT ]
[+] EMBL CD145363 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTNTCATGTGTCGTTTCCCTATTGGTCAATTNTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATC ]
[+] EMBL CD145332 [TCCTGTGGGACTCCTCAGTGGCAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGGAACTTTTTACGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTAT ACCTTCACGTGTCCTTCCTTTCCATTGGGTACTGTTAATAGTCAT ]
[+] EMBL CD146531 [ TTTCGGTTTAAACACAATGGAATTGAATAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGGTAAGCCCTAACTTGGAATCCTGGAGGGAAACAGTAAAGAAAAAGGCCAAAGTACACACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTT ]
[-] EMBL CD145164 [ CACTAAGTCGGGAATGGGAAACAGACATCGAAAGAATCAATAACCACTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTANAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTATTTACAGTGTCCTAACTATGACTTTCATGTGTCGTTTCCCTATTGGTCAATTTTGAGTCGTCCTAATTATAACCTTCACGTGTCCTTCCTTTCCATTGGTTACTGTTAATAGTCATCGTAACTGTATAAATATGCCTTGTCTGTAAACCATTTTTGTTCTGCTGCTGACCCCATAAACAATTATTATTTAACGGCTGTGTTCTGATTTATTGGAGTTGGGGAACAGTATTGGGGTAGAGCTAGGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACCCTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTATACTAGGTAGGATCCGGTT]
[+] EMBL CD145182 [ cCTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTATTGGCCATTA ]
[+] EMBL CD145205 [ ntannccCTGGAAAGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCACAAGAATATCCCAAAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATAATTCGCATGTTGTTTCCTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11169#0 CATCTGAAGAAGGTTTGATTTGTTCAAATAACAGTGTCAGAATGTTTTGGGTGTTTCTCC 60
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 CTCCAAATTCTAAAAGTTACCCTGAAATTAGTCTGCATCACTGTTATAACGTATAGATTT 120
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 CTGGCCTCTTAATATATATGTATATGTCCAATGATACAGGAAATACGTACGAGCAGTCTT 180
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 GGGTGCTATTCGGTCCTTCCTATCTGCCTAGCCCAGTCCGTTAAGTCCAGAACACAAATA 240
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 ACAGCCTCGGCAATATGAATCATTATTTACAAGCATACTGGGTTATATATACTAACCAAA 300
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 CAGACCACATATACCAAAAATAGAAAAATAACATTTGTACAGTAATTGGCCAATGTGGCT 360
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 GTAGCTAGGGGGAAAGTATCAATAATAATAGTCCAAGGTCAAAATAAAGGTTGTGATAAG 420
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 AGGAACACGGAAACGATTAGGTCACTTATTTAACAACTATCCAATAGGAATAGGCATATT 480
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 ATATTTGTCCATAAATAGACATCAGATTTAGGTTACTCATTTAACAACAATCCAATAGGA 540
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 ATAGGCGTATTACATTTGTCCATAAATGGACATCAGATTTATGATTCATAATTCGCCAGG 600
consensus_11169#1 -----------------------------------------TCCTGTGGGACTCCTCAGT 19
* * * ** ***
consensus_11169#0 GGATACAACACCTCCCCTTTTTGAGAAATCCGGGGTTGATATCCGGATTTTAAATTTTCT 660
consensus_11169#1 GG-CAGTGCGCATCCACAATCCCGCACTCGCGAGATTCGAATCCAGG----AACTTTTTA 74
** * * * *** * * * ** * ** **** * ** ****
consensus_11169#0 CGGATTCACCCTCCCCCACGAAAGA-CTGTTG----GATCCTCATATAGCCAAGTTACTA 715
consensus_11169#1 CGTTAAAAATCTTAAAAGCTATAAATCTGTCGTTTCGGTTTAAACACAATGGAATTGA-A 133
** * ** * * * * **** * * * * * * * ** *
consensus_11169#0 TTAATGCGATATGTTTGTCACATTTAACAGGGAATGCATTAGAACTGAAGAGATCATGAG 775
consensus_11169#1 TAAATATATTCTGTTTTCTAATGTTTAAAATCAATACACTGAATCACAAGG-----TAAG 188
* *** * ***** * ** * * *** ** * * * *** * **
consensus_11169#0 GATCGACGACATTTGATTCGAGGTCACCAACATTTGATTCTTCTGAAATAGTTTCCTTGA 835
consensus_11169#1 CCCTAAC----TTGGAATCCTGGAGGGAAACAGTAAA-------GAAAAAGGCC-----A 232
** ** ** ** ** **** * * **** ** *
consensus_11169#0 ATTTCCTCGGAACCTCATTAGTAGATAATGAATCATTAGGATAATCAGTATCTA-TGAGA 894
consensus_11169#1 AAGTACACACTAAGTCGGGAATGGGAAACAGA-CATCGAAAGAATCAATAACCACTGGAA 291
* * * * * ** * * * ** * *** * ***** ** * * ** *
consensus_11169#0 GTTGTATTGGATTCTTGATTATCATT--TAATACATCTGACATTTTTCTCTCATTTTTAT 952
consensus_11169#1 AGCATTATCCAGGATAGACTTGCATGGACAATCCCGGTGGGTGGCTGTTAGGATATTCAC 351
* * * * ** * *** *** * ** * * ** ** *
consensus_11169#0 AAGAGAATTCAACAGAAACATATGAATCATCAAA----ATAATCTAAATCTGGTAGAACA 1008
consensus_11169#1 AAGAATATCCCA-AAAATTATCTCGAATGTAAAATGGTATGTTTTCAGACTCTTCACATA 410
**** ** * * * ** ** * * * *** ** * * * ** * * *
consensus_11169#0 ATT-ACAGAATTTTGATCATTAGATTCATTAGAAACATTTTTCGTATCATGATTAATTTC 1067
consensus_11169#1 ATTCGCATGTTGTTTCCTATTGG--CCATTATTTACAGTGTCCTAACTATGACT---TTC 465
*** ** * ** *** * ***** *** * * * * **** * ***
consensus_11169#0 ATTTGGCGCCTCTGTATTCAATACACTGCTCGATTTGTTTTCCGTTTCTTCATGGGCGGG 1127
consensus_11169#1 ATGTGTCGTTTCCCTATT-GGTCAATT--TTGAGTCGTCCTA-ATTATAACCTTCACGTG 521
** ** ** ** **** * * * * ** * ** * ** * * ** *
consensus_11169#0 TACTGCAGCAATTTTAATGGCGCTTAATAAGATATTGTCTCTCTGTGAACTGGACGATTC 1187
consensus_11169#1 TCCTTCCTTTCCATTGGTTACTGTTAATA-GTCATCGTAACTGTATAAATATGCC--CTG 578
* ** * ** * * ****** * ** ** ** * * ** * * *
consensus_11169#0 ATTGCTCGCACGTTTTGTTTCAGGGTTAATAAGACTTGGACCGTGTACAGGGCATGTCTC 1247
consensus_11169#1 TCTGTAAACCATTTTTGTTCTGCTGCTGACC---------CCATAAACA----ATTATTA 625
** * ******* * * * ** * *** ** *
consensus_11169#0 TGAAACAGGTA-GTACTGGGTTACTGGGCTGATCATGTATAACTGCTGCGCTTAAATTAT 1306
consensus_11169#1 TTTAACGGCTGTGTTCTGATTTATTGGA---GTTGGGGAACAGTATTGGGGTAGAGCTA- 681
* *** * * ** *** *** *** * * * * * ** * * * **
consensus_11169#0 TGCTTTGTATGGATTCATTGAGGCTTTCGCCGGCATATTCATTAGTTCTGTAATCGTTTT 1366
consensus_11169#1 ------GGATATGTGAATTTGGTCTATCGGTAGAATTGTGAGTAGTCGTGTGGCAATACC 735
* ** * *** * ** *** * ** * * **** *** *
consensus_11169#0 CCAGCTCTGTACGCAATTTTGAAATTAATGCGTCAACTTCCGTTGCACCCCCAAAGCATG 1426
consensus_11169#1 CTCCCGATATATATTGGCTTTATAACAATGTGGCTACGGAGATTTTGCTGACAAGGTGTA 795
* * * ** ** * * **** * * ** ** * *** * *
consensus_11169#0 GGTGATTCAGCAGCTTCGCGTGTAACTTGTCAATGAAATCCAATTGACTCTTTCTAAAGC 1486
consensus_11169#1 T---ACTAGGTAGGATCCGGTT-------------------------------------- 814
* * * ** ** **
consensus_11169#0 GCTGCTCTTGTCGCTGGATTAGCAACTGAAATTGATCGGAAGTTAGAGCCATTTTTTTAT 1546
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 GCAAATAATAATAATAAATCCAAAAAACACCGGCAATTATTATGGATTATTTAATTCCGA 1606
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 AATGACGTCAGCGGCTGCTGTATTTTTTTTTTCCAGAATCCCATCCCCGTCGCCAATTGT 1666
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 TATAACGTATGAATTTCTGGCCTGAACAGTATTGGGTGCTATTCGGTCCTTCCTATCTGC 1726
consensus_11169#1 ------------------------------------------------------------
consensus_11169#0 CTAGCCCAGTCCGTTAAGTCCAGAA 1751
consensus_11169#1 -------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||