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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11170#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1332 fasta sequence
[TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATGTGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATACACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAATACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAATGTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT-GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT-TCATTGGTGTGTTGA-TGAATGTACATCTCTTTGTGTTTG-TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
[+] EMBL CD065228 [TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATGTGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATACACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAATACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAATGTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGCTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCACACTTCTATTTAATTGCTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACA ]
[+] EMBL AI067151 [ GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGAGTGTTGATTGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTG ]
[+] EMBL AI067277 [ GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCG ]
[+] EMBL AI067701 [ GACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGATTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGGAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTAGTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAAATATAAACTCTTGTCTGATGAGCACATATTTGCATTACATGTA ]
[-] EMBL CD115971 [ AGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTAT ]
[+] EMBL CD161248 [ CACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGA ATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTTGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATA ]
[+] EMBL CD161415 [ CACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGA ATACCT GCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAACTTTTTACTCGCATATCATTTCCTGA ]
[+] EMBL CD114152 [ ATAGTTAAAAAGTCCACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCT GCGTGTGTATGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATATCACGATAGATAT TCATTGGTGTGTTGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTGTCTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTGTGTTTTTACTAAAGTTGCCTATCTGTATTCTGCCTATTGTAGTAGGACATCATCACCAATAGTTCTCCATGTTTGAGAT ]
[+] EMBL AI740221 [ agcgagtATATACCTGGCGTGTGTTTGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTNNTCGTTTCATATCACGATAGTTATGNNATTGGTGTGTTGA TGAATGTACATTTCTTTGTGTTGGNTGTTCTTTTATATAGCCTTTTATACTCTTAGCATTTTTCC ]
[+] EMBL CD078754 [ cgaggTAAACAT TCATTGGTGTGTCGA TGAATGTACATCTCTTTGTGTTTG TGTTCTTATATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTCATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTCTATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGCTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGNTATTATATACACANAGAGTTCTCTCTCA ]
[-] EMBL CD075718 [ GTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTTTATGCGCATACCCGAGTTATTATATACACAAAGAGTTTTTTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTTTTTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA ]
[-] EMBL AW017136 [ TCTACCATTTTATTCATTTGTTCGGTTTTTAATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGATTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTG ]
[-] EMBL CD073214 [ AGCACATATTTGCTTANCATGTATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATAC ]
[-] EMBL AW017177 [ ACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTAATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATTAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTACTGCGTA]
consensusID : consensus_11170#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 696 fasta sequence
[CGAGGACGCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGTCTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA-GGTCCCCTTTCC-AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG-GATATTGAG-TTCAA-TCTATT-G-GGTGATATCTCTGACTTT-AAGTCGAA-ACCTGTCTCAATC-GTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA-AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGAATATACCTGCGTGTGTTTGTACCTATT]
[+] EMBL CD082103 [CGAGGACGCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGTCTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCCTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATT G GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAATC GTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGAATATACCTGCGTGTGTTTGTACCTATT]
[+] EMBL CD162394 [ gtGCGACTTANAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAGAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCCTTTGC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCA GATATTGAG TTCAA TCTATT G GGTGATACCTCTGACTTT AAGTCGca ]
[+] EMBL CD068595 [ CATGAATCTAGAC AAGAAGA GAGAG TTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCC TGGCACGTTTAA GGTCCCCTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATT G GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAAT ]
[+] EMBL SM624 [ CGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAA GGTCCCNTTTCC AGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG GATATTGAG TTCAA TCTATTGG GGTGATATCTCTGACTTT AAGTCGAA ACCTGTCTCAATCGGTTGAAGGNTGCAGTTACCG ]
[+] EMBL CD196594 [ ACTATTAGGTCCAGCCCTTGGCACGTATAATGGTCCCCTTTCCTAGAAAGATCTGCAGATGTTGTGTGCGAGAAGTACTGTATTCTCGTTGACGGGCAACCGAGATATTGAGATTCAAGTCTATT GCGGTGATATCTCTGACTTTGAAGTCGAATACCTGTCTCAGTC ATTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACAATGTACAAAGAGATATTGTGTGTGGGCTACGTTATATAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGATATGTCCGTTATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTGTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGG ]
[-] EMBL CD184285 [ cGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACAT ]
[-] EMBL CD187172 [ ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTCTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT ]
[-] EMBL CD186867 [ ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT ]
[-] EMBL CD186969 [ ATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAGTGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGACGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTCTACAGATTCTTAACAT ]
[+] EMBL BG932032 [ gGGACTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAG AGCCCC ]
[+] EMBL BG932027 [ gGGACTACGTTATA AGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCCTGAAG AGCCCC ]
consensusID : consensus_11170#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 585 fasta sequence
[GCTATTATAACACATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC-TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACA]
[+] EMBL CD193891 [GCTATTATAACACATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGANAGATCTGCAAATGTTGTNGTCGAGAAGTTCT ]
[+] EMBL SMW723 [ tgcatgATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCACGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAGGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAGGGGATATCGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAANGGCCCTATTCTAG ]
[-] EMBL CD148189 [ TCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATT ]
[+] EMBL CD116021 [ CTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACC TGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCT ]
[+] EMBL CD190338 [ GGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCGTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTTAAGTCGAAACCTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTACTATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCTATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACATATCTGGACA]
consensusID : consensus_11170#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 541 fasta sequence
[AGGCCAGAATTCGGCACGAGGATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN]
[+] EMBL CD082818 [AGGCCAGAATTCGGCACGAGGATGATTGTTTGTGTCGATTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN]
[-] EMBL SMT14650 [ AAATTTGTGTGTAGAACGGAATTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGAATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAAGTATGAACAACGAAGACTCAGATGTGTTTGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTAATAGGACATCATCACCAATAGTTTTCCATTTTTGAGATTCTATGCGCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACA TCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA ]
[-] EMBL SMT14598 [ AGANTCTATGCGCATACCCGAGNTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAATAAATTGATTGAGNATAGATATGTATGTGTTTGGAGTGANTTTTCCGTATGACAGTCTGCAGGGAAAATCGTNAGTTACATTCGCTCTCNTCTTTACTATCAGGAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACA ]
[-] EMBL SM623 [ TGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGTATGACAGTCTGCAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTATTTTCTTTTGCAATAAAACATAC ]
consensusID : consensus_11170#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 426 fasta sequence
[TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTCCAGATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATG-TTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCATATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG]
[+] EMBL CD195597 [TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTCCAGATAGTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATG TTAAAAATGAATACAAACCACCTGAAAAACGCACTCTGGAAGAGATCATGAATCTAGACAAAGAAGACGAGAGTTTGCGAAAATACAAAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCATATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGTATTCTCGTTGAGGGGCAACCG]
[-] EMBL CD064141 [ TACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTANACGCGAATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGTCTGTTGAGGAAGGCGACTTAGAGAGTGATGATTACAGATGAATACTAAGCACat ]
consensusID : consensus_11170#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence
[AATGTNNGNACCTATTANTNTNGTTACTNNATCTNCANNCTNCTATTNATTTGTTGNCGTTTCATATCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCCACAGAANACTATCACTTATTGTCATNGTCATATCCTGGGGTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTATAANCNCTNGCNTGATGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTACGGTATNATANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTAGGAACGGGAANTGTGTACATGAN]
[+] EMBL SM696 [AATGTNNGNACCTATTANTNTNGTTACTNNATCTNCANNCTNCTATTNATTTGTTGNCGTTTCATATCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCCACAGAANACTATCACTTATTGTCATNGTCATATCCTGGGGTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTATAANCNCTNGCNTGATGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTACGGTATNATANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTAGGAACGGGAANTGTGTACATGAN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TAATAATAGCAATAGTAATAATAATAACGATGGGGTTATTCTTTTATGTAGTCAACAATG 60
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TGTATGTGTGTGCGTGTGGGATAGTCATTATTCAATAAAAGTTTCAGTGCACCTAGATAC 120
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 ACTTTACAGACATACATATATTTATTTTACATTTTTACACTCTAAACACAAAAATAGAAT 180
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 ACTAACAGTTATTCTCGTATCTCCCTTTTAATGATTATTTTCTTCCGTAGTTGATGAAAT 240
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 GTCAGTAATGCTAGGCAATTTTCGTCCTCAAGGACACCCACATATCTGGACATCGGACCC 300
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAAATTGTGAGTCAGTTTAT 360
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATTAATATAGTTAAAAAGTC 420
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TACAGATTCTTAACATCATATAAATCAGTTTTTGCCCACATGAATATACCTGCGTGTGTT 480
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TGTACCTATTAATATTGTTACTTTATCTTCAAACTTCTATTTAATTGTTTTCGTTTCATA 540
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TCACGATAGATATTCATTGGTGTGTTGATGAATGTACATCTCTTTGTGTTTGTGTTCTTA 600
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TATATAGCCGTTTATACTCTTAGCATTTTTCCACAGAAACTTTCACTTATTGTCATTGTC 660
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 ATATCCTTTTTTGTATACATTTTATTCTATCTACCATTTTATTCATTTGTTCGGTTTTTA 720
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 --------------------------------------------GCTATTATAACACATA 16
consensus_11170#4 -----------TCACTACAGAGTTATCGGCTCACTTTCTCTCTTGTTCTTTTC-CAGATA 48
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 ATTATAAACTCTTGTCTGATGAGCACATATTTGCTTTACATGTATGATTGTTTGTGTCGA 780
consensus_11170#3 ---------------------AGGCCAGAATT-CGGCACGAGGATGATTGTTTGTGTCGA 38
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 GTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGA 76
consensus_11170#4 GTCTCGCTTACTGCTCTTGACACTCTTATAGAACACGACGTGCCTTCAAGCTAAACGCGA 108
consensus_11170#1 ------------------------------------------------------------
consensus_11170#0 TTTACGGTGTCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAA 840
consensus_11170#3 TTTACGGTATCATAACATCAGATTCTACTTCTATTATTGAAATTTGTGTGTAGAACGGAA 98
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGT 136
consensus_11170#4 ATCTACCAAAGGCTATAGGTCTCACTATTTTGTTGGCGTTTTCGAGAATGGCAGAACCGT 168
consensus_11170#1 ------CGAGGAC-----GCACGAGGATTTTGTTGGCGTTTTCGAGAATGTCAGAACCGT 49
consensus_11170#0 TTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGA 900
consensus_11170#3 TTGTGTTCATGAATTTTCAATTTTTTACTCGCATATCATTTCCTGATGTGCGTGTACTGA 158
consensus_11170#5 ----------AATGTNNGNACCTATTAN-----TNTNGTTACTNNATCTNCANNCTNCTA 45
* * ** *
consensus_11170#2 CTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 196
consensus_11170#4 CTGTTGAGGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 228
consensus_11170#1 CTGTTGACGAAGGCGACTTAGAGAGTGATGTTAAAAATGAATACAAACCACCTGAAAAAC 109
consensus_11170#0 ATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAA-GTATGAACAAC 959
consensus_11170#3 ATCCGCGATTTTTCCGCTTAATTCCCCGTATAAATTTAAAATGCATAA-GTATGAACAAC 217
consensus_11170#5 TTNATT--TGTTGNCGTTTCATATCACG-ATAGATATTCATTG-GTGT-GT-TGATGAAT 99
* ** * * * * *** **
consensus_11170#2 GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 253
consensus_11170#4 GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 285
consensus_11170#1 GCAC-TCTGGAAGAGATCATGAATCTAGACAAAGAAG--ACGAGAGTTTGCGAAAATACA 166
consensus_11170#0 GAAGACTCAGATGTGTT--TGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTA 1017
consensus_11170#3 GAAGACTCAGATGTGTT--TGTTTTTACTAAAGTTGTTTATCTGTATTCTGTTTATTGTA 275
consensus_11170#5 GTACATCTCTNTGTGNTGGTNTTCTTATNTATNGCCGTCATATACNCTTAGCATATCTCC 159
* * * * * * ** * * * *
consensus_11170#2 AAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCT--------------- 298
consensus_11170#4 AAGAAGTACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCTGTATGTTTCATTTCA 345
consensus_11170#1 AAGAAGCACTATTAGGTCCAGCCCTTGGCACGTTTAAGGTCCCCT--------------- 211
consensus_11170#0 ATAGGACATCATCACCAATAGTTTTC--CATTTTTGAGATTCTATGC------------- 1062
consensus_11170#3 ATAGGACATCATCACCAATAGTTTTC--CATTTTTGAGATTCTATGC------------- 320
consensus_11170#5 ACAGAANACTATCACTTATTGT------CATNGTC-ATATCCTGGG-------------- 198
* * ** * * ** * * * *
consensus_11170#2 -------------------TTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 339
consensus_11170#4 TATGCTAATATCCATACAGTTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 405
consensus_11170#1 -------------------TTCCAGAAAGATCTGCAAATGTTGTGTTCGAGAAGTTCTGT 252
consensus_11170#0 -GCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAA 1121
consensus_11170#3 -GCATACCCGAGTTATTATATACACAAAGAGTTCTCTCTCACGCATACATAAAGTATTAA 379
consensus_11170#5 -GTGNATACATATTATTCTNTCTACCATTGNATTCATTTGGTNCGGCTNTGAATTAT-AA 256
* * * * * ** *
consensus_11170#2 ATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTT 399
consensus_11170#4 ATTCTCGTTGAGGGGCAACCG--------------------------------------- 426
consensus_11170#1 ATTCTCGTTGAGGGGCAACCGGATATTGAGTTCAATCTATTGGGTGATATCTCTGACTTT 312
consensus_11170#0 TAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGT-ATGACAGTCTG 1180
consensus_11170#3 TAAATTGATTGAGTATAGATATGTATGTGTTTGGAGTGATTTTTCCGT-ATGACAGTCTG 438
consensus_11170#5 NCNCTNGCNTGA---TGAGCACATATANGCTGAACATGTNTGATTGGTTGNGGCGATNTA 313
* *
consensus_11170#2 AAGTCGAAAC---CTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTAC 456
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 AAGTCGAAAC---CTGTCTCAATCGTTGAAGGCTGCAGTTACCGTATTCAAGTCGTTTAC 369
consensus_11170#0 CAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTA 1240
consensus_11170#3 CAGGAAAAATCGTCAGTTACATTCGCTCTCTTCTTTACTATCAGTAAATGTGTTGCCTTA 498
consensus_11170#5 CGGTATNA-----TANNATCANATACTNCTCCTNTTANTGAAAATGGGTGTGGTA----- 363
consensus_11170#2 TATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCT 516
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 TATGTACAAAGAGATATTGTTTGTGGGCTACGTTATAAGCAGTGGTTACGTAAAGGCCCT 429
consensus_11170#0 TTTTCTTTTGCAATAAAACATACTGATGTACTATAAAAAAAAAAAAAAAAAAAAAAAAAA 1300
consensus_11170#3 TTTTCTTTTGCAATAAAACATACTGATGTNCNNNNNANAANNN----------------- 541
consensus_11170#5 ---------GGAACGGGAANTG----TGTACATGAN------------------------ 386
consensus_11170#2 ATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACAT 576
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ATTCTAGTTGATGAAATGTCCGTAATGCTAGGCAATTTTCGTCCTCAAGGTCACCCACAT 489
consensus_11170#0 CATGCCATGCAGCTGCATTACCGTACTGCGTA---------------------------- 1332
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ATCTGGACA--------------------------------------------------- 585
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ATCTGGACATCGGACCCTGAAGAAGCCCCTAAAGGCGTTTTATCACGTGGCTCATACAAA 549
consensus_11170#0 ------------------------------------------------------------
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 ATTGTGAGTCAGTTTATTGATGATGATAAAGCGGAATATATCACCTGGAAGTGGTGTATT 609
consensus_11170#0 ------------------------------------------------------------
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ------------------------------------------------------------
consensus_11170#4 ------------------------------------------------------------
consensus_11170#1 AATATAGTTAAAAAGTCTACAGATTCTTAACATCATATAAATCAGTTNTTGCCCACATGA 669
consensus_11170#0 ------------------------------------------------------------
consensus_11170#3 ------------------------------------------------------------
consensus_11170#5 ------------------------------------------------------------
consensus_11170#2 ---------------------------
consensus_11170#4 ---------------------------
consensus_11170#1 ATATACCTGCGTGTGTTTGTACCTATT 696
consensus_11170#0 ---------------------------
consensus_11170#3 ---------------------------
consensus_11170#5 ---------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||