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Schistosoma mansoni
cluster # 11172 cluster # 11172       Sequences # 37       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11172#0 length = 1960 sequences # 29  
consensus_11172#1 length = 1068 sequences # 6  
 consensus_11172#2 length = 496 sequences # 1  
consensus_11172#3 length = 261 sequences # 1  
consensusID : consensus_11172#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 29
consensus length = 1960
fasta sequence 
                              [GATGCCTTACTCGACTGTTACTGATTGTGACAAATACGAAGACAGTGATTTATGTAAAGAAAAAAAGCACCTTTGGTCTAGTCTACTCGAAGAGGTTACACACAAGGCTGCAGTGACATTGTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAATAGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTTGAATATCAAGGATGAAGACAGAGATGATCAAACGAAACTGAATGTGTGGATTTTGGACGGCAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTGCTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTCCTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTGAGGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTCTTACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATACAATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAATCCGTCTTC-AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC-TCGT-GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATTCTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACTGTATGCTTTAATGTGACATTTTCATTCTTTTTCTTATTCTGATGCTTGGATTTAACGTTCGAGTTCCTTTTTAGGCTTAATGTTTATATCAAACAAGTTTCTCCAACATGGACTC]

[+] EMBL CD131590             [GATGCCTTACTCGACTGTTACTGATTGTGACAAATACGAAGACAGTGATTTATGTAAAGAAAAAAAGCACCTTTGGTCTAGTCTACTCGAAGAGGTTACACACAAGGCTGCAGTGACATTGTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAATAGCCCGACTACAGGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD130794             [                                                 TTATGTAAAGAAAAAAAGCACCTTTGGTCTAGTCTACTCGAAGAGGTTACACACAAGGCTGCAGTGACATTGTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAATAGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTTGAATATCAAGGATGAAGACAGAGATGATCAAACGAAACTGAATGTGTGGATTTTGGACGGCAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTGCTTCATTATGATATGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD130501             [                                                                                                                       TGTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAATAGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTTGAATATCAAGGATGAAGACAGAGATGATCAAACGAAACTGAATGTGTGGATTTTGGACGGCAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTCCCGGAGATTGCTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD195319             [                                                                                                                                                                          CTACTCTAATAGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTTGAATATCAAGGATGAAGACAGAGATGATCAAACGAAGCTGAATGTGTGGATTTTGGACGGCAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTGCTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTAGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AI976498             [                                                                                                                                                                                                                                                                                                                            CACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTGCTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AI976499             [                                                                                                                                                                                                                                                                                                                            CACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTGCTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACCAAGGTTGATTCTATGGNGGCTCTGGAAAAAGAAAAT AGTTCACAGAAGAACACTTTGACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI067184             [                                                                                                                                                                                                                                                                                                                                                                                                                  TATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGGCCTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGAGGACATAAACTGTGATTTACTGAATCGTTACCTACAAAGTCGTATCTACGGGTTTCCATTCAGTCAAACTGCGTATGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI068259             [                                                                                                                                                                                                                                                                                                                                                                                                                  TATTAGCAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAATCA TTCACAGAAGAACAC TTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTCCTATGGAGCGGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AI068110             [                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTACTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI067964             [                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAAGATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTCCTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGACGACAAAAACTGTGATTTACTGAATCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI067471             [                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCCTAAATAAGTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAACGTTGATTCTATGGGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BF936315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCAAGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGCGAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGGACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD179118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTCCTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTGAGGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD168985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTCCTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTGAGGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTCTTACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATACAATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAATCCGTCTTCTAATGT TGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGAC ACAGGGGGACCTGGATCAGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD145420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD153404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGACAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD153183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD202190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                C AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGACCAGTTATTGGGTGATGT                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD145421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGT                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD075817             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATTCTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACTGTATGCTTTAATGTGACATTTTCATTCTTTTTCTTATTCTGATGCTTGGATTTAACGTTCGAGTTCCTTTTTAGGCTTAATGTTTATATCAAACAAGTTTCTCCAACATGGACTC]
[+] EMBL CD145497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAA                                                                                                                                                                                                                                                      ]
[+] EMBL CD145582             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTCAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTATATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACGGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAA                                                                                                                                                                                                                                                      ]
[+] EMBL CD145529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAATGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTCTTCGT GAAACACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGTGTGA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD153150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD153469             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD202299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACCGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD202339             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGT GAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD145458             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCTATCTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTC TCGTAGAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCAAGACAACATCTATCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATTCTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCGGATT                                                                                                                                      ]
[-] EMBL CD072622             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGG                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_11172#0
GATGCCTTACTCGACTGTTACTGATTGTGACAAATACGAAGACAGTGATTTATGTAAAGA
AAAAAAGCACCTTTGGTCTAGTCTACTCGAAGAGGTTACACACAAGGCTGCAGTGACATT
GTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAAT
AGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTT
GAATATCAAGGATGAAGACAGAGATGATCAAACGAAACTGAATGTGTGGATTTTGGACGG
CAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTG
CTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAA
GTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCA
AGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGC
GAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGG
ACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTC
AAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGG
ACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGG
GATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAA
TCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTC
CTATGGAGCGGCACTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAA
TCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGA
AAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTGA
GGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACC
GTCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTCT
TACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATAC
AATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAA
TCCGTCTTCAGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTC
TTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGG
TGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGT
TGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGAT
CTCACAAAAAGATATTCAATCTGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACT
GGATGTTGGAGATAATGGTCCTGAACAGTTATTGGGTGATGTTCGACAACAGAAACTGGA
CGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCAAGACAACATCTAGCTTCAG
CGAGCAACCAAGTCAAGTTTAGTTATGCATTAATTCTTATTATTTCCGATATTTCTCATC
TACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACTGTATGCTTTAATGTG
ACATTTTCATTCTTTTTCTTATTCTGATGCTTGGATTTAACGTTCGAGTTCCTTTTTAGG
CTTAATGTTTATATCAAACAAGTTTCTCCAACATGGACTC

consensusID : consensus_11172#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1068
fasta sequence 
                              [ATGGAGCGGCACTTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGG-GATAACCCAAAGAAAATTGGAATTCTTGAGG-AAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCG-AACCGGAACTGTTTGCTCAAGATGACC-AATCATTTCTTACTCGACTCTCGGTC-AGTATGCAAAGAG-ATAATGCTCAGGCAAATATTTCAAAT-AATAC-AATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAATCCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTC-AATCCGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCAAGAACAGTTATTGGNGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCCAAGACACATCTAGCTTCAGCGAGCAACCAAGTCAAAGTTAGTTATGCATTAATCTTATTATTTNNCGATATTCTCATCTACGAATTCAGNNTACATTNCAGATNATCTTCGNNTACACGAAACTGTATGCTTAATGGGACATTNTCATTCTTTTTCTATNCTGAAGCTGGGATTTAACGTTTCGAGTCCTTTTAGGCTTATGTTTATATCAACAGGTTCTTCCACTGTG]

[+] EMBL CD116383             [ATGGAGCGGCACTTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGG GATAACCCAAAGAAAATTGGAATTCTTGAGG AAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCG AACCGGAACTGTTTGCTCAAGATGACC AATCATTTCTTACTCGACTCTCGGTC AGTATGCAAAGAG ATAATGCTCAGGCAAATATTTCAAAT AATAC AATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAATCCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD171499             [                                                                                                    AAACTGCGTATGTTGTCGAAAGAGACTGTATTTTCGTTCCAGCCGGATGG GATAACCCATAGAAGATTGGAATTCTTGAGGAAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCGAAACCGGAACTGTTTGCTCAAGAAGACCAAATCATTTCTTACTCGACTCTCGGTCAAGTATGCAAAGAGAATAATGCTCAGGCAAATATTTCAAATAAATACAAATATCTGGTAATT AGAATCTGTCATGGATCAACTTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD082205             [                                                                                                                                            tgctcGAGGGCGATAACCCAAAGAAAATTGGAATTCTTGAGG ATTACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCGTCAAAAAAAGCTGCAGTTCGCG AACCGGAACTGTTTGCTCAAGATGACC AATCATTTCTTACTCGACTCTCGGTC AGTATGCAAAGAG ATAATGCTCAGGCAAATATTTCAAAT AATAC AATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAATCCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTC AATCTGAACTGAAAAGGCTGGCTCANAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGNGTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCCAAGACACATCTAGCTTCAGCGAGCAACCAAGTCAAAGTTAGTTATGCATTAATCTTATTATTTNNCGATATTCTCATCTACGAATTCAGNNTACATTNCAGATNATCTTCGNNTACACGAAACTGTATGCTTAATGGGACATTNTCATTCTTTTTCTATNCTGAAGCTGGGATTTAACGTTTCGAGTCCTTTTAGGCTTATGTTTATATCAACAGGTTCTTCCACTGTG]
[-] EMBL CD128982             [                                                                                                                                                                                                                                                                                                                                                  TGCTCAGGCAAATATTTCAAAT AACAC AATATCTGGTAATTCAGATTCTGTCAGGGATCAACTTGGAGCAGCTACTGCTTTGATGAATCGGTCTTCAAATGTTGGAAGTAGCCCAGTTTTTGGATCTCCCCGCACCCTTGGTTCTGTTGGTAGATCAAACCTTTCTTCAGCTGTTGGTGAAGCTGTTGGGACAACAGGGGGCCTTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTC AATCCGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCAAGAA                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD202459             [                                                                                                                                                                                                                                                                                                                                                                                                                    GGAGCAGCTACTGCCTTGATGAATCCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTTTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATTTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCTCAAAAAGATATTCTCATCCGAACTGTAAAGGCTGGCTCAAAGATTTCTTGAAGCGCTGGATATTGGAGATAANAGTCTCGAACAGAGATTGG GTGATGTTC                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD072332             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GAGCTGCTGGGACAACAGGGGGACCTGGATCAAGAAATTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAA GTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTC AATCCGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGGGAAGAACAGTTATTGGgt                                                                                                                                                                                                                                                                                                      ]




>consensus_11172#1
ATGGAGCGGCACTTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGAAT
CGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCGAA
AGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTGAG
GAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCACCG
TCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTCTT
ACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATACA
ATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGAAT
CCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCGCACACCTGGTTCTGCT
GGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGA
TCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACA
CCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCT
TTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAA
AGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCAAGAACAGTTATTGGNGTGATGT
TCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGACCCA
AGACACATCTAGCTTCAGCGAGCAACCAAGTCAAAGTTAGTTATGCATTAATCTTATTAT
TTNNCGATATTCTCATCTACGAATTCAGNNTACATTNCAGATNATCTTCGNNTACACGAA
ACTGTATGCTTAATGGGACATTNTCATTCTTTTTCTATNCTGAAGCTGGGATTTAACGTT
TCGAGTCCTTTTAGGCTTATGTTTATATCAACAGGTTCTTCCACTGTG

consensusID : consensus_11172#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 496
fasta sequence 
                              [TGCCTTGATGAATCCGTCTTCTAATGTTGGATCTCNCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGGCCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATACTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACTGTATGCTTTAATGTGA]

[-] EMBL CD169859             [TGCCTTGATGAATCCGTCTTCTAATGTTGGATCTCNCCGCACACCTGGTTCTGCTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGATAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTCTCGTGAAGCACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGGCCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATACTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACTGTATGCTTTAATGTGA]




>consensus_11172#2
TGCCTTGATGAATCCGTCTTCTAATGTTGGATCTCNCCGCACACCTGGTTCTGCTGGTAG
ATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCTGGATCAGG
GGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAACGCACACCTGT
TGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAGGTTCTTTAGA
TAGGACGTCGATCTCACAAAAAGATATTCAATCCGAACTGAAAAGGCTGGCTCAAAGTTC
TCGTGAAGCACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAATTGGCCAAGAC
AACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATACTTATTATTT
CCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTTACAACGAACT
GTATGCTTTAATGTGA

consensusID : consensus_11172#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence 
                              [CGCAGGCCAGAATTCGGTCCGAGGGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTC]

[+] EMBL CD077718             [CGCAGGCCAGAATTCGGTCCGAGGGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAATCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTC]




>consensus_11172#3
CGCAGGCCAGAATTCGGTCCGAGGGCTGCCCTTCTTTCAAGTACATTAAACTCACTATCT
GAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTATGGAA
ACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCCAATAGTTGTAGTGATG
ACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAATCAGTTCACAGAAGAACACTTTG
ACTTCATCCAAATGCACGTTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GATGCCTTACTCGACTGTTACTGATTGTGACAAATACGAAGACAGTGATTTATGTAAAGA 60
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AAAAAAGCACCTTTGGTCTAGTCTACTCGAAGAGGTTACACACAAGGCTGCAGTGACATT 120
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GTCTCCCTCCAAAACTCTAGTTGTTTTGGGGGATGACGAGTGTGGGAAAACTACTCTAAT 180
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AGCCCGACTACAGGGTACAGAAGATCCAAAAAAAGGTTTCGGACTCGAGTACACCCTTTT 240
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GAATATCAAGGATGAAGACAGAGATGATCAAACGAAACTGAATGTGTGGATTTTGGACGG 300
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      CAACACTATTCACAGTCACCTTTTGAAGTTTGCGATCAATGAAGAGTCTTTCGGAGATTG 360
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      CTTCATTATGATATGTGTGAGCATGATGGAACCATGGAATATTATTAGCAGCCTAAATAA 420
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GTGGGTTGGTATCTTGAGGGAACATGTTGGTAATCTCAAAGTTCCAGATGAAAAGCTTCA 480
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AGAATACAAGAAAAATATTTTGCGCCAGTTCTGTAGTTATCTAGAACCTGATGTACTGGC 540
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GAACACTGCTCATGTTGCACCCATATGTATCAGCCCATCTGGTAATCATCAACCTAATGG 600
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      ACAACCTGTTTCACCGAAAAAGTTATCGGGAATACACCCTGCAACAGCTGCCCTTCTTTC 660
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AAGTACATTAAACTCACTATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGG 720
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      ACAAGCAAACATTTCTATGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGG 780
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      GATTCCAATAGTTGTAGTGATGACAAAGGTTGATTCTATGGGGGCTCTGGAAAAAGAAAA 840
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ------------------------------------------------------------
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      TCAGTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTCGACGTTTCTGTTTGTC 900
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      --ATGGAGCGGCACTTGTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGA 58
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      CTATGGAGCGGCACT-GTTTTATGTGTCAGTAAAGGAGGACAAAAACTGTGATTTACTGA 959
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCG 118
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      ATCGTTATCTACAAAGTCGTATCTACGGTTTTCCATTCAGTCAAACTGCGTATGTTGTCG 1019
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      AAAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTG 178
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AAAGAGACTGTATTTTCGTTCCAGCCGGATGGGATAACCCAAAGAAAATTGGAATTCTTG 1079
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      AGGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCAC 238
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      AGGAAAACCTTACTCAAGTTCAACCGCATAGTCTCTATTCTGATGTAGTTCTTCCACCAC 1139
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      CGTCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTC 298
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      CGTCAAAAAAAGCTGCAGTTCGCGAACCGGAACTGTTTGCTCAAGATGACCAATCATTTC 1199
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      TTACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATA 358
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      TTACTCGACTCTCGGTCAGTATGCAAAGAGATAATGCTCAGGCAAATATTTCAAATAATA 1259
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      CAATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGA 418
consensus_11172#2      -------------------------------------------------TGCCTTGATGA 11
consensus_11172#0      CAATATCTGGTAATTCAGATTCTGTCATGGATCAACTTGGAGCAGCTACTGCCTTGATGA 1319
consensus_11172#3      -------------------------------------------------CGCAGGCCAGA 11
                                                                         **      **

consensus_11172#1      ATCCGTCTTCTAATGTTGGAAGTAGACCAGTTTCTGGATCTCCCCGCACACCTGGTTCTG 478
consensus_11172#2      ATCCGTCTTCTAATGTTGGA------------------TCTCNCCGCACACCTGGTTCTG 53
consensus_11172#0      ATCCGTCTTCAGTTTCTGGA------------------TCTCCCCGCACACCTGGTTCTG 1361
consensus_11172#3      ATTCGG-TCCGAGGGCTGCCCTT---------------CTTTCAAGTACATTAAACTCAC 55
                       ** **  * *      **                      *    * ***      **  

consensus_11172#1      CTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCT- 537
consensus_11172#2      CTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCT- 112
consensus_11172#0      CTGGTAGATCAAAGCCTTCTTCAGCTGTTGGTGGAGCTGCTGGGACAACAGGGGGACCT- 1420
consensus_11172#3      TATCTGAAACTGCGTCTCAGCCACCATCTGTTGTAAATGTTGGACAAGCAAACATTTCTA 115
                           *  * *   * **    ** *   ** ** *  ** ***   * **       ** 

consensus_11172#1      --GGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAAC 595
consensus_11172#2      --GGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAAC 170
consensus_11172#0      --GGATCAGGGGCTTCTGAAGGTGTATTAGCCAATTTTTTCAATAGTCTGCTTAGCAAAC 1478
consensus_11172#3      TGGAAACAAACACTGATGAGAATGCTCTAACCAACAATTTGGGGATTCC----AATAGTT 171
                         * * **    **  ***   **   ** ****   ***    * **     *  *   

consensus_11172#1      GCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAG 655
consensus_11172#2      GCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCACTAAGTACACAAG 230
consensus_11172#0      GCACACCTGTTGTTGGTGGAGTTGGCGGCATTGGAACATCTGCATCATTAAGTACACAAG 1538
consensus_11172#3      GTA-----GTGATGACAAAGGTTGATTCTATGGGGGC-TCTGGAAAAAGAAATC-----A 220
                       * *     **  *       ****     ** **  * **** *  *  ** *       

consensus_11172#1      GTTCTTTAGATAGGACGTCGATCTCA--CAAAAAGATATTCAATCCGAACTGAAAAGGCT 713
consensus_11172#2      GTTCTTTAGATAGGACGTCGATCTCA--CAAAAAGATATTCAATCCGAACTGAAAAGGCT 288
consensus_11172#0      GTTCTTTAGATAGGACGTCGATCTCA--CAAAAAGATATTCAATCTGAACTGAAAAGGCT 1596
consensus_11172#3      GTTCACAGAAGAACACTTTGACTTCATCCAAATGCACGTTC------------------- 261
                       ****     * *  ** * **  ***  ****   *  ***                   

consensus_11172#1      GGCTCAAAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCAAGAACAGTTATTGGN 773
consensus_11172#2      GGCTCAAAGTTCTCGTGAAGCACTGGA--------------------------------- 315
consensus_11172#0      GGCTCAAAGTTCTCGTGAAGCACTGGATGTTGGAGATAATGGTCCTGAACAGTTATTGGG 1656
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      GTGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAAT 833
consensus_11172#2      -------------------------CGAAGTCAAATCAGTTGACTCCGGATCATCTAAAT 350
consensus_11172#0      -TGATGTTCGACAACAGAAACTGGACGAAGTCAAATCAGTTGACTCCGGATCATCTAAAT 1715
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      TGACCCAAGACACATCTAGCTTCAGCGAGCAACCAAGTCAAAGTTAGTTATGCATTAAT- 892
consensus_11172#2      TGGCCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATA 410
consensus_11172#0      TGACCAAGACAACATCTAGCTTCAGCGAGCAACCAAGTCAAGTTTAGTTATGCATTAATT 1775
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      CTTATTATTTNNCGATATTCTCATCTACGAATTCAGNNTACATTNCAGATNATCTTCGNN 952
consensus_11172#2      CTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTT 470
consensus_11172#0      CTTATTATTTCCGATATTTCTCATCTACGAATTCAGTTAACAATTCAGATTATCTTCGTT 1835
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      TACACGAAACTGTATGCTT-AATGGGACATTNTCATTCTTTTTCT-ATNCTGAAGCTGGG 1010
consensus_11172#2      -ACAACGAACTGTATGCTTTAATGTGA--------------------------------- 496
consensus_11172#0      -ACAACGAACTGTATGCTTTAATGTGACATTTTCATTCTTTTTCTTATTCTGATGCTTGG 1894
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      ATTTAACGTTTCGAGTCCTTTTAGGCTT--ATGTTTATATCAA-CAGGTTCTTCCACTGT 1067
consensus_11172#2      ------------------------------------------------------------
consensus_11172#0      ATTTAACGTTCGAGTTCCTTTTTAGGCTTAATGTTTATATCAAACAAGTTTCTCCAACAT 1954
consensus_11172#3      ------------------------------------------------------------
                                                                                   

consensus_11172#1      G----- 1068
consensus_11172#2      ------
consensus_11172#0      GGACTC 1960
consensus_11172#3      ------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)