These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 36 consensus length = 1562 fasta sequence [CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC-TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA-GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATTTTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAATTTTT] [-] EMBL CD189425 [CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATGTGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG ] [+] EMBL CD078450 [ CGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAA ] [+] EMBL CD179694 [ CGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAACTTGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTACCTATTCAGTTCATCAACTGCGT ] [+] EMBL CD198270 [ GGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGACGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTNTCGCCCGTATATGCCGAGTTGCGNTAAAAATACGCGGTTCAAG ] [+] EMBL CD150379 [ AACCATTACAAACCTGGAGTTCAATCTACATTCCATAATTACTAATTCAGCACTGTTTCTCTTGCCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTNGGAACTGG ] [+] EMBL CD119024 [ TCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATNTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCACTGACAGTTGCTATTTTGG ] [-] EMBL CD119124 [ AAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGT ] [-] EMBL CD189677 [ TGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACA ] [+] EMBL CD116439 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ] [+] EMBL CD116416 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGA TTTTCAGTTGA ] [+] EMBL CD116397 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ] [+] EMBL CD116377 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ] [+] EMBL CD116319 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGCTGAGTCCAAG ] [+] EMBL CD154842 [ CGGGATTTACATCGTATTCAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGT ] [+] EMBL CD116403 [ CGGGATTTACATCGTATTTAAGTTCGTTCTTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ] [-] EMBL CD154881 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ] [-] EMBL CD154818 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGG ] [-] EMBL CD154884 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTACGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGGAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ] [-] EMBL CD154795 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ] [-] EMBL CD154817 [ nnnnATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ] [+] EMBL CD156808 [ TGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGCTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGNCAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGNTGCTATCATTATGACTTTCG ] [+] EMBL CD156610 [ TGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTCTCAAGAAGTCTA CAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATT ] [+] EMBL CD149018 [ AAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGCCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGG ] [+] EMBL CD148912 [ AAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTATAAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGAAAACCTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTCTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAAC ] [+] EMBL CD149026 [ AAAAAAACGCGGTTCATGTTTGAGTTTTCAAGAAGATCA TAGAACTCAGATGGTTCCGAATGACAATGAAACTTATCGGACAACTCTGATTTTTCACTTGAGTCCAGAGATTTCATATGCACTGGCATCGGAATTGTGCTCGGCACTCGCTACTACTTTTCATGACATTGGATCGCGAACAATTTTATTGCACCGACAGTTGCTATTTTGGCCATCTAATTCATAAGGGTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACAATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGCCGCAAAAAACCTAGATATTCCAATCAAAGCTACTTTTCCGCGTGATTTTCTTTCACATGGAT ] [+] EMBL CD149003 [ gttcgcTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAAGGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTACTGAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCT ] [+] EMBL BG931667 [ GTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTAT ] [+] EMBL CD120973 [ ACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATG ] [-] EMBL CD120943 [ CTACTTTTCAGGACATTGGATCGCGAACAATTNTATGNCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTNTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCACGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGG ] [+] EMBL CD149094 [ GATAGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAGTCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCCGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAAACATATCGACCc ] [+] EMBL CD148936 [ GATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTTGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTC ] [+] EMBL CD136434 [ TCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTAAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCG ] [-] EMBL CD148883 [ AATCANAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGAAAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCT ] [+] EMBL CD136459 [ ATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTTTGACTTTCG ] [-] EMBL AI975326 [ GGTTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATTTTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAATTTTT] [-] EMBL BG932516 [ gaAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATCTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTa ] consensusID : consensus_11176#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 335 fasta sequence [ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC] [-] EMBL CD132864 [ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11176#0 CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAAC 60 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 GGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTT 120 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 CTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCA 180 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 ACTGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGT 240 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 GCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGT 300 consensus_11176#1 -ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGT 59 ********************************************************** consensus_11176#0 GTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCC 360 consensus_11176#1 GTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCC 119 ************************************************************ consensus_11176#0 ATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCA 420 consensus_11176#1 ATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCA 179 ************************************************************ consensus_11176#0 AGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGAT 480 consensus_11176#1 AGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGAT 239 ************************************************* ********** consensus_11176#0 TTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG 540 consensus_11176#1 TTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG 299 ************************************************************ consensus_11176#0 TACTACTTTTCAGGACATTGGATCGCG--AACAATTTTATTGCAGTGACAGTTGCTATTT 598 consensus_11176#1 TACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC------------------------ 335 ********* ******* * * * *** consensus_11176#0 TGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGAC 658 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAA 718 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 ACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCG 778 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 GCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTA 838 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTG 898 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 GATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGC 958 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 ACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGG 1018 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 CTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGA 1078 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 AGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAAC 1138 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 CTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATG 1198 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAAT 1258 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 GTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTG 1318 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATT 1378 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGA 1438 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 ATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATT 1498 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAAT 1558 consensus_11176#1 ------------------------------------------------------------ consensus_11176#0 TTTT 1562 consensus_11176#1 ---- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||