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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 36 consensus length = 1562 fasta sequence
[CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC-TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA-GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATTTTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAATTTTT]
[-] EMBL CD189425 [CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATGTGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG ]
[+] EMBL CD078450 [ CGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAACGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAA ]
[+] EMBL CD179694 [ CGGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAACTTGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTACCTATTCAGTTCATCAACTGCGT ]
[+] EMBL CD198270 [ GGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTTCTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGACGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTNTCGCCCGTATATGCCGAGTTGCGNTAAAAATACGCGGTTCAAG ]
[+] EMBL CD150379 [ AACCATTACAAACCTGGAGTTCAATCTACATTCCATAATTACTAATTCAGCACTGTTTCTCTTGCCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTNGGAACTGG ]
[+] EMBL CD119024 [ TCTTTCCGTTCATTAACTAGTAAGAAGTCAAC TGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATNTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCACTGACAGTTGCTATTTTGG ]
[-] EMBL CD119124 [ AAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGT ]
[-] EMBL CD189677 [ TGCAGCACTGTTTCCATTTCTCGCCAGTGCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACA ]
[+] EMBL CD116439 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ]
[+] EMBL CD116416 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGA TTTTCAGTTGA ]
[+] EMBL CD116397 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ]
[+] EMBL CD116377 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ]
[+] EMBL CD116319 [ CGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGCTGAGTCCAAG ]
[+] EMBL CD154842 [ CGGGATTTACATCGTATTCAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGT ]
[+] EMBL CD116403 [ CGGGATTTACATCGTATTTAAGTTCGTTCTTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAG ]
[-] EMBL CD154881 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ]
[-] EMBL CD154818 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGG ]
[-] EMBL CD154884 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTACGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGGAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ]
[-] EMBL CD154795 [ GGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ]
[-] EMBL CD154817 [ nnnnATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTA ]
[+] EMBL CD156808 [ TGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGCTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGNCAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGNTGCTATCATTATGACTTTCG ]
[+] EMBL CD156610 [ TGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTCTCAAGAAGTCTA CAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATT ]
[+] EMBL CD149018 [ AAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGCCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGG ]
[+] EMBL CD148912 [ AAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTATAAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGAAAACCTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTCTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAAC ]
[+] EMBL CD149026 [ AAAAAAACGCGGTTCATGTTTGAGTTTTCAAGAAGATCA TAGAACTCAGATGGTTCCGAATGACAATGAAACTTATCGGACAACTCTGATTTTTCACTTGAGTCCAGAGATTTCATATGCACTGGCATCGGAATTGTGCTCGGCACTCGCTACTACTTTTCATGACATTGGATCGCGAACAATTTTATTGCACCGACAGTTGCTATTTTGGCCATCTAATTCATAAGGGTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACAATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGCCGCAAAAAACCTAGATATTCCAATCAAAGCTACTTTTCCGCGTGATTTTCTTTCACATGGAT ]
[+] EMBL CD149003 [ gttcgcTCAAGTTTGAGTTTTCAAGAAGTTTA GAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAAGGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTACTGAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCT ]
[+] EMBL BG931667 [ GTCAATGGAACTTATTGGACAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTAT ]
[+] EMBL CD120973 [ ACTACTTTTCAGGACATTGGATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATG ]
[-] EMBL CD120943 [ CTACTTTTCAGGACATTGGATCGCGAACAATTNTATGNCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTNTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCACGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGG ]
[+] EMBL CD149094 [ GATAGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAGTCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCCGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAAACATATCGACCc ]
[+] EMBL CD148936 [ GATCGCGAACAATTTTATTGCAGTGACAGTTGCTATTTTGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGACTGTTCGTATACGATATATTTTTGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTC ]
[+] EMBL CD136434 [ TCATGATGGCTGTCGCAAAAAACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTAAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCG ]
[-] EMBL CD148883 [ AATCANAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCGGCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGCACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGGCTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGAAGGAAAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCT ]
[+] EMBL CD136459 [ ATTGCTATGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTGGATACACAGCCTATATCGTTGCTATCATTTTGACTTTCG ]
[-] EMBL AI975326 [ GGTTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAACCTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATTTTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAATTTTT]
[-] EMBL BG932516 [ gaAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATGTATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAATGTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTGTTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATTTTGGGACATCAGTATTCAAGATCTAAACATCATAAAAAGTGAAAATACCGAAATATGTGAATATTATTATATAACTACGGCAAGCAATCAAAGTTACTa ]
consensusID : consensus_11176#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 335 fasta sequence
[ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC]
[-] EMBL CD132864 [ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGTGTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCCATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCAAGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGATTTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGGTACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11176#0 CTACGCGTACAGTTTGAGAACATGAACGTAAGCGATATAGGAAATGTGAGCGATACAAAC 60
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 GGAACCATTACAAACCTGGAGTTCAATCTAGATTCCATAATTACTAATTCAGCACTGTTT 120
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 CTCTTGGCCATAGTACCTATTTATATAGGTTCTTTCCGTTCATTAACTAGTAAGAAGTCA 180
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 ACTGAAGAGGTAGAAGTTGTATCAAGTAAAGATGCAGCACTGTTTCCATTTCTCGCCAGT 240
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 GCTGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGT 300
consensus_11176#1 -ATGCACTTTTCGGGATTTACATCGTATTTAAGTTCGTTCCTATTCAGTACATCAACTGT 59
**********************************************************
consensus_11176#0 GTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCC 360
consensus_11176#1 GTTATGAAGGTATATTTTTCTTTTATGGGTGCCTGTGCAATATCCCGTTTCTTGTCACCC 119
************************************************************
consensus_11176#0 ATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCA 420
consensus_11176#1 ATCTTTCGCCCGTATATGCCGAGTTGCGTAAAAAATACGCGGTTCAAGTTTGAGTTTTCA 179
************************************************************
consensus_11176#0 AGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGACAACTATGAT 480
consensus_11176#1 AGAAGTTTAGAGAACTCAGATGGTTCCGAATGTCAATGGAACTTATTGGGCAACTATGAT 239
************************************************* **********
consensus_11176#0 TTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG 540
consensus_11176#1 TTTTCAGTTGAGTCCAAGGATTTCATAGGCACTGGCATCGGTATTTTGCTTGGCACTTGG 299
************************************************************
consensus_11176#0 TACTACTTTTCAGGACATTGGATCGCG--AACAATTTTATTGCAGTGACAGTTGCTATTT 598
consensus_11176#1 TACTACTTTCCAGGACAGGGTCTTTTCTCAGGAATC------------------------ 335
********* ******* * * * ***
consensus_11176#0 TGGCCATCGAATTCATAAGGTTAAATAAATTCGTAAATGGCATATTACTTCTTTGCGGAC 658
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TGTTCGTATACGATATATTTTGGGTGTTTGGAACTGGTGTCATGATGGCTGTCGCAAAAA 718
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 ACCTAGATATTCCAATCAAAGTTACTTTTCCGCGTGATTTTCTTTCACATGGATTATTCG 778
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 GCAAGCAATTAGCCTTACTTGGTCTTGGTGATATAGTTGTTCCAGGAATATTTATTGCTA 838
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TGCTTCTTAGGTTCGACACAAAACTTGGACGCAAGAATAGCTACGCTTACTTCTACTCTG 898
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 GATACACAGCCTATATCGTTGCTATCATTATGACTTTCGTAATGATGCACGTATTCAAGC 958
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 ACGCTCAGCCGGCTTTACTTTACCTGGTACCTGCCTGTTTGGGTGCACCATTGCTTATGG 1018
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 CTTTAGTGAAAAACGATCTCAGTGCAATGTTTAGCTATGAAGATGAACCGGAAACTGAGA 1078
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 AGGANAGTCAGGAGGCTGAAGTGTCGAACGACTCTAAGAAAAGTAAATAACAATATCAAC 1138
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 CTTTGGGGTGGGAGCAACTGACCGATTTTATCATCCTAATCTGTCCATATATAACTTATG 1198
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TATACAAATATATTTATTTGCACAGTGTTAAGTATGTAACGTTTGTGCTACATGCTGAAT 1258
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 GTTTGTTTTGTTTTCTGTGAAATAATGTTGTTTGTGAAAAACTCTAACACAACTTTCTTG 1318
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TTTGACATTTGTTCTAACTTTATCTCTTTGCTAATAAATCTGTTACACTGTCTGTTTATT 1378
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TTGGGACATCAGTATTCAAGATTTAAACATCATAAAAAGTGAAAATACCGAAATATGTGA 1438
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 ATATTATTATATAACTACGGCAAGCAATCAAAGTTACTTCTTCAGATCATCATTTTCATT 1498
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TTATGATGAATACATATTTAACATAATATTTTGATTGTTTTGACAGTACTAATAATAAAT 1558
consensus_11176#1 ------------------------------------------------------------
consensus_11176#0 TTTT 1562
consensus_11176#1 ----
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||