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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11179#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 513 fasta sequence
[CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA-CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG]
[+] EMBL CD086073 [CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGCCCGAAAAGAGGGTTGACTTGAGTCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD134278 [ ACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAAGCTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG]
[+] EMBL CD134277 [ ACGAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAA CTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATGGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTTCAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATG]
consensusID : consensus_11179#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 30 consensus length = 505 fasta sequence
[ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG-AAATGCTT-CTAGTGGGGTATG-ACG-AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG-AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA-CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGACC]
[+] EMBL CD086209 [ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD086227 [ GTAATACAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGTAAATGCTT CTAGTGGGGTATG ACGCAAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCATTATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGA ]
[+] EMBL CD096038 [ TAATACAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGCGGGGTATG ACG AGAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD086254 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATGAACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095797 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095820 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095832 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095836 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095879 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095910 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095923 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095933 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095981 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD096060 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095844 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTCGCAGGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD096007 [ ATAGAAACTTCTCTTAGTCTGCATAAAAGTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAAGTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTCAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095777 [ ATAGAAACTTCTC TAGTCTGCATAAAATTTGCGAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACGAAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGCTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095825 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGAGGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095839 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGACTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095966 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGACGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095979 [ ATAGAAACTTCTCTTAGTCTGCACAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095858 [ ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGCTTGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[-] EMBL CD095664 [ TAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGAC ]
[+] EMBL CD188680 [ TGCAAGTTTTACACGG AAATGCTT CTAGTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAGCAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGACC]
[-] EMBL SMAA18517 [ AAGTTTTACACGG AAATGCTTACTAGTGGGGTATG ACG AAAAATTAATCATTAACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGGTGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGA ]
[+] EMBL CD144363 [ GTGGGGTATG ACG AAAAATTAATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGA ]
[+] EMBL CD095852 [ AATCATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD095932 [ CATTTACATTGATGATTATGAGAGGAATAACTATATGATGATCACAATTGACACG AAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA ]
[+] EMBL CD134651 [ CAGAAGATATGCGATGATTACTGATGAATTTTAAAGCA CTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAGGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAGTACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCA ]
[+] EMBL CD197959 [ aaTTAAGGGAGCTATANTTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCACCCAAAAGAGGTAGCAAAATACTGAACAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCAACGAGCAGCCA ]
consensusID : consensus_11179#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 369 fasta sequence
[ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG-AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
[+] EMBL CD095994 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGGCAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
[+] EMBL CD096026 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
[+] EMBL CD095776 [ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTACACGGAAATGCTTATTGATGATTATGAGAGG AATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
[+] EMBL CD086295 [ TATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
[+] EMBL CD095808 [ TGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCATTAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAATTTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCAATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGCAAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACGGTCTGTTAGGACCTTTGGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11179#1 ACAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 60
consensus_11179#2 ------------------ATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 42
consensus_11179#0 -CAGGAGGAAATAGAGTAATAGAAACTTCTCTTAGTCTGCATAAAATTTGCAAGTTTTAC 59
******************************************
consensus_11179#1 ACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAG 120
consensus_11179#2 ACGGAAATGCTT---------------------------------ATTGATGATTATGAG 69
consensus_11179#0 ACGGAAATGCTTCTAGTGGGGTATGACGAAAAATTAATCATTTACATTGATGATTATGAG 119
************ ***************
consensus_11179#1 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 180
consensus_11179#2 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 129
consensus_11179#0 AGGAATAACTATATGATGATCACAATTGACACGAAAAAACTGAGCTTCATATAAATGCAT 179
************************************************************
consensus_11179#1 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 240
consensus_11179#2 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 189
consensus_11179#0 TAGAACTGTGATGAGATACGTTGACAACAGGCAGAAGATATGCGATGATTACTGATGAAT 239
************************************************************
consensus_11179#1 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 300
consensus_11179#2 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 249
consensus_11179#0 TTTAAAGCACTCTAATTGGCTCCCATTCACGTTGGAGAATGCGAATGGTATCTCGATGCA 299
************************************************************
consensus_11179#1 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 360
consensus_11179#2 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 309
consensus_11179#0 ATATCGGTCCGAAAAGAGGGTTGACTTGAGCCATGGATGACATCAGCCAAAAGAGGTAGC 359
************************************************************
consensus_11179#1 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAAC---------------------- 398
consensus_11179#2 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAAC---------------------- 347
consensus_11179#0 AAAATACTGAAGAGGTTGCAAGCATCAGTTGAATCAACCTAGAAGTTTCTTATCAGCCTT 419
**************************************
consensus_11179#1 ---------------GGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGCCA 443
consensus_11179#2 ---------------GGTCTGTTAGGACCTTTGGGGA----------------------- 369
consensus_11179#0 CAACAAATCGCTTACGGTCTGTTAGGACCTTTGGGGACTATAAGAGGTCCTCCACAGGCA 479
**********************
consensus_11179#1 ACAAGCAGCCAGAAAACAGTCATTACTGTTAATGGAACTTCGTAACCCATTTCCAAAAGA 503
consensus_11179#2 ------------------------------------------------------------
consensus_11179#0 ACAAGCAGCCAGAAAACAGTCATTACTGTTAATG-------------------------- 513
consensus_11179#1 CC 505
consensus_11179#2 --
consensus_11179#0 --
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||