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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11180#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 36 consensus length = 1577 fasta sequence
[AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC--TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG-AGTTTGGGGGTA-CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT-GGGGGGAAAGTTGGTGCA-CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC-TCAAC-TGATCACAGCATTACAAGCAAGAAA-TAACGCTCGTGCCTTGTTCATTGGTTCGTT-GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC-TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG-CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA-TAACGGAAATTGGGTT-CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA]
[-] EMBL CD134104 [AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATCATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTA ]
[-] EMBL CD094814 [ GCTTGGCGCTGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCTAAAAATTTATTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCCACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCT ]
[-] EMBL CD163621 [ ATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAATAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAAGCGTTAGAGAAATAACCAATTTTA ]
[+] EMBL AI976486 [ GGTTGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAAAAAACACCCTTGTTATCGACCATTTCAATTTCCACAAAAGAGATGATGGTTTACACTtc ]
[+] EMBL AI976246 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTATGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGC ]
[+] EMBL AI975136 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTT ]
[+] EMBL AI976494 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTNTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGT ]
[+] EMBL AI976287 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTCTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGA ]
[+] EMBL AI975184 [ TGCTCTTACTGCCGCTATTATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTNTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGA ]
[+] EMBL CD060591 [ ctagcctgGCTATTATTTGCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTGGCCCCATCTGTTAGCG AGTTTGGGGGTA CATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGA ]
[-] EMBL CD119170 [ GGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCT ]
[+] EMBL CD178137 [ TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATAC TCGGGTCTAATTATTTTAGCCCCATCTGTTAGCG AGTTTGGGGGTG CATTAAACGTTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATANGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TC ]
[+] EMBL BF936721 [ AAAATACCTTGGGGAATATTTATACCTTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAAGTTTGGGGGTACCATTAAGCGTTAGAAAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAATTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGGAAAGTTGGTGCACCCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAAC ]
[-] EMBL CD168957 [ TTAAAGAAATAACCAACTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTA ]
[+] EMBL AI976733 [ ACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGCTTTACTtg ]
[+] EMBL SMT14544 [ TGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGNTCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACACTTCAACTTGATCACAGCATTACAAGCAAGAAATTAATGCNCGTGCCTTGTTCATTGGTTCGTTGGGATTTTTTGTCGAACTCGTTCTTTGNATtc ]
[+] EMBL CD192420 [ GAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGC TTACTGACAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGANACATCACCGAGTGGGTGAAACTCTCCCACCTAG CCAGTATACAATTNTGGATGACGTTGTTTACACCATCAAAATAGAAACAAAAGACGATTACCCGGAATTGGGTT CCTTT ]
[+] EMBL SMAA18463 [ AGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTGTACACTCTTTAATCACTGTGCCTGTAAATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCTACTTGNTCACAGCATTACAAGCAAGAAA TAACGCCCGT ]
[-] EMBL CD127014 [ AGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTGCATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTATCCAAATACTGTCGGAACAAACAC TCAAC CGATCACAGCATTACAAGCAAGAAA TAATGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTTTTGTCGAACTCGTTTTTTG ]
[-] EMBL CD127040 [ AGAGATGATGGTTTACACTCTTTAATCACTGTGCCTGTAAATAACCTAGTCAAGAGCAATGTGATAACT GGGGGGAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAATAGATTAGCCAAATAC GTCGGAAGAAACA ]
[+] EMBL CD186826 [ ATAACCTAATCAAGAGCAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAA ]
[+] EMBL CD201326 [ CAATGTGATAACT GGGGGAAAAGTTGGTGCA CCTTTGTTATACCGTGGGATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGTATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACATAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATC ]
[-] EMBL CD151762 [ GGTGCA CGTTTGTTATACCGTGGGATAGGTATCTCAGCTGATCAAACTAGCCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTATTATAGCTATAACCCAGAC AAACAATAACAGATTATCCGAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TATCGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCACCCGTTCAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGT TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATAGTTATGTGGAACATCGCCGAGTGGGTGAAACTCTTCCACTTAG CCAGTATGCAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGTCGA TAACGGAAATTGGGTTGCCTTTCAATGCAGACGATGTCC ]
[-] EMBL CD151805 [ GGTGCA CGTTTGTTATACCGTGGGATAGGTATCTCAGTTGATCAAACTAGCCCTTTAATCATTGATGTCTTACATGGATCGAAGACTTATTATAGCTATAACCCAGAC AAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCACCCGTTCAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGT TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGTTTCGACATAGTTATGTGGAACATCGCCGAGTGGGTGTAACTCTTCCACTTAG CCAGTATGCAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGTCGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCC ]
[+] EMBL CD183337 [ TTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAGACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACAAACAC TCAAC TGATCACAGCATTACAAGCAAGAAA TAACGCTCGTGCCTTGTTCATTGGTTCGTT GGATTTCTTGTCGAATTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGATGC TTACTGATAATCTGTTGCGATGGGTTTTGGGTGAGCGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATG ]
[+] EMBL CD134460 [ TTTGTCGAACTCGTTCTTTGAATCAACCGTTGAAACGGAGTCTCATAAGGGTGTTGTTTGTGGCAACCAGGTGC TTACTGACAATCTGTTGCGA ]
[+] EMBL CD131213 [ GTGGGTGAAACTCTCCCACCTAGNCCAGTATACAATTTTGGATGACGTTGTTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATA ]
[+] EMBL CD192090 [ GTGGGTGAAACTCTTCCACCTAG CCAGTATACGATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTT ]
[+] EMBL CD147576 [ CTAG CCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCTTTTATCAGAAAGAAAATGAAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGCGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACGATATGAACGATTCCTCGTGGGTGCTTATCCTTATTATAGTAGTGCTATAT ]
[-] EMBL CD149514 [ TTTACACCATCAAAATAGAAACAAAAGCCGA TATCGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTAGTAGTTGATTATTATCGTGTTGGTTATACACACCTATTAAGTGTCACACAAGTTCCTGTTAGTCCATTCCCTCATACACAATATG ]
[-] EMBL CD145287 [ GAAACAAAAGACGA TAACGGAAATTGGGTT CCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGATCCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTACCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTCGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTA ]
[-] EMBL AI395193 [ tTACGGAGTA TCAAA TCGTAGTTGATTA TATCGTGTTGGCTATACACACCTATTAAGTGTCACACAAGTT CTGTTCGTCCATTTACTCATACACAATATGAACGATTCGTCGTGGCTGCTTA CCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA]
[-] EMBL AI395455 [ TCACAACAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTACTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAA ]
[-] EMBL CD061044 [ CCTGTTCGTCCATTTACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCATTTAGCTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAGCAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGATTAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTT ]
[+] EMBL SM9241 [ ACTCATACACAATATGAACGATTCCTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATA ]
[-] EMBL SMT14543 [ AAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCTCGACAACAACGCTTTGTGTGATGTATATGTGTGTANTTTTGACACTTCCTTTTTCGAAAACAATTTCACGTTTGTATTGTATGAAAANAAAATCNAANTTTACTATCNTGTTGTGTAGATTAGGTATTTANTTTTGATCTAATTTACAGTGGCTCTTTANTCTTTTGTTAANCCCTGCTACTCANTCTCAAGTTTGTATTATATGTGC ]
consensusID : consensus_11180#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATACTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTAGTAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC]
[+] EMBL AI976355 [TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGAAAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTATAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATATTTATACTCGGGTCTAATTATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACATTAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGCTGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGATGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATGGTTTAGTAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAACCTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC]
consensusID : consensus_11180#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence
[ACGGATATTCAAATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAATTAGTGTCACACAAGTTCCTGGTTCGCTCCAATTACTCATACACCATATGAACGATTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCTCATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGATATAGGTGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATGTGTAGTATATTTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTATGATGATATATCTACTA]
[+] EMBL AW497746 [ACGGATATTCAAATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAATTAGTGTCACACAAGTTCCTGGTTCGCTCCAATTACTCATACACCATATGAACGATTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCTCATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGATATAGGTGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATGTGTAGTATATTTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTATGATGATATATCTACTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11180#0 AGCTTGGCGCCGGTACAACGTCATTATTCAAATAATGTGGTTGCTCTTACTGCCGCTATT 60
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 ATTTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGA 120
consensus_11180#1 --TTTCACCTTTTGTGGCTAGTTATGAAGATAAATCGAAAAATCTACTAGTGCTTCTGGA 58
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 AAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTA 180
consensus_11180#1 AAATGTGTATATTAAGGAGACTCATTCAACTTTTTTAGATATGTTAACAAACAGGGGTTA 118
consensus_11180#2 ----ACGGATATTCAA-ATTCGTAGTTGATTATTATCGGTGTTGGCCTATACACACCTAA 55
* ***** * * * * * * * ** * * * * * *** * *
consensus_11180#0 TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATA 240
consensus_11180#1 TAACTTGACCACGAAACTTGCTGACGAGTCATCTATTTCACTAAAATACCTTGGGGAATA 178
consensus_11180#2 TTAGT--GTCACACAAGTTCCTGGT---TCGCTCCAATTACTCATACACCATATGAACGA 110
* * * *** ** ** *** ** * *** * * *** * * * *
consensus_11180#0 TTTATACTCGG--GTCTAAT--TATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACAT 296
consensus_11180#1 TTTATACTCGG--GTCTAAT--TATTTTAGCCCCATCTGTTAGCGAGTTTGGGGGTACAT 234
consensus_11180#2 TTCCTCGTTGGCTGCCTAATCCTATTATAGATAGTGTCTATATCAAGTGTGAGATGGCCT 170
** * * ** * ***** **** *** ** * *** ** * * *
consensus_11180#0 --TAATCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGGAACCTCGTTGTAGTCGC 354
consensus_11180#1 --TAAGCGTTAGAGAAATAACCAATTTTATCGACGATGGCGGAAACCTCGTTGTAGTCGC 292
consensus_11180#2 CATATGCACATTAGAGTTTGTATATTGTGTATATAAAAGAGTGTGCCAGAT----ATAGG 226
** * *** * *** * * * * * * ** * * *
consensus_11180#0 TGGCCCCAATGTAGGTGAATCTATTCGAGAGTTAGGAAGTGAATGCGGGGTGGAGTTTGA 414
consensus_11180#1 TGGCCCCAATGTAGGTGAATCTATTCGAGAGTTACGAAGTGAATGCGGGGTGGAGTTTGA 352
consensus_11180#2 TGTATATGAGAGATCTCGAGCAACAAGCGCTCTGTGTGATATATATG---TGTAGTATAT 283
** * * * * * * * * * * * ** * ** *** *
consensus_11180#0 TGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATG-GTTTA- 472
consensus_11180#1 TGAAGAAAACACCCTTGTTATCGACCATTTCAATTTCGACAAAAGAGATGATG-GTTTAG 411
consensus_11180#2 TTGAGACATCCTCTTTTCGAGAACACATCACATGTGTAGTAGTAT-GATGATATATCTAC 342
* *** * * * ** * *** ** * * * ****** * **
consensus_11180#0 ------------------------------CACTCTTTAATCACTGTGCCTGTAAATAAC 502
consensus_11180#1 TAAGTTTTTATAATACATTAATATTCATAGCACTCTTTAATCACTGTGCCTGTGAATAAC 471
consensus_11180#2 TA---------------------------------------------------------- 344
consensus_11180#0 CTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATACCGTGGG 562
consensus_11180#1 CTAGTCAAGAGCAATGTGATAACTGGGGGGAAAGTTGGTGCACCTTTGTTATAC------ 525
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 ATAGGTATTTCAGCTGATCAAACTAACCCTTTACTCATTGATGTCTTACATGGATCGAAG 622
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 ACTTCTTATAGCTATAACCCAGACAAAACAATAACAGATTATCCAAATACTGTCGGGACA 682
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 AACACTCAACTGATCACAGCATTACAAGCAAGAAATAACGCTCGTGCCTTGTTCATTGGT 742
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 TCGTTGGATTTTTTGTCGAACTCGTTCTTTGAATCAACCGTTGAGACGGAGTCTCATAAG 802
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 GGTGTTGTTTGTGGCAACCAGATGCTTACTGATAATCTGTTGCGATGGGTTTTGGGTGAG 862
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CGTGGTCAGCTGCGACATACTTATGTGAAACATCACCGAGTGGGTGAAACTCTTCCACCT 922
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 AGCCAGTATACAATTTTGGATGACGTTATTTACACCATCAAAATAGAAACAAAAGACGAT 982
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 AACGGAAATTGGGTTCCTTTCAATGCAGACGATGTCCAGTTGGAGTTTGTGCGAATCGAT 1042
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CCATTTATCAGAAAGAAAATGGAACACAAAAATGGTGAATACCAACTTGTTATGAAACTA 1102
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CCTGATGTGTACGGAGTATTCAAATTCGTAGTTGATTATTATCGTGTTGGCTATACACAC 1162
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CTATTAAGTGTCACACAAGTTCCTGTTCGTCCATTTACTCATACACAATATGAACGATTC 1222
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CTCGTGGCTGCTTATCCTTATTATAGTAGTGCTATATCAATGATGATTGGCCTAATATCA 1282
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 TTTAGTTTTGTATTTTTGTATTTAAAAGATGACAAAGAAAAAGGTGAATAAGAGAGATCT 1342
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CGACAACAACGCTTTGTGTGATGTATATGTGTGTATTTTTGACACTTCCTTTTTCGAAAA 1402
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CAATTTCACGTTTGTATTGTATGAAAATAAAATCTAATTTTACTATCTTGTTGTGTAGAT 1462
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 TAGGTATTTATTTTTGATCTAATTTACAGTGGCTCTTTATTCTTTTGTTAATCCCTGCTA 1522
consensus_11180#1 ------------------------------------------------------------
consensus_11180#2 ------------------------------------------------------------
consensus_11180#0 CTCATTCTCAAGTTTGTATTATATGTGCTTTTGAATCAAAAAAAAAAAAAAAAAA 1577
consensus_11180#1 -------------------------------------------------------
consensus_11180#2 -------------------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||