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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11199#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 1037 fasta sequence
[GATAATACAAAAG-TTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC-TGGTGGTCTCAACAGAAGTC-TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG-ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC-TTTGGGAATTTGGTTCACC-A-GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA-CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG-ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA-GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG-AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTTT]
[+] EMBL BF936761 [GATAATACAAAAG TTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAAGAAATTTGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCCAGTAGCTGAAGAAAACGGCTTTTGGAAATTTGGTTCACC A GGTGTTTACGTTATGA ]
[+] EMBL AF321922 [ ATAATACAAAAGTTTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGCATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTT ]
[+] EMBL SMT14557 [ ATAATACAAAAG TTTCTGCTTGAAAATGCATGAGTCAGTANCTNCTAACATTGAAAATGTCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGNCGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGCTTGGTGGTCTCAACAGAAGTCTTCAAACTCGGTGACTTCGTGATCTTTGAAGACCACATTTACCTT CNGGGCTAGGGTTAAATAATNTTTNGGTCGGNCC NATCAGGGGGCATTTNGTACTCG ATTCCCA CACTTTCGGATGCC ATGCCAGgnc ]
[+] EMBL AI018923 [ ggtcgtgncGCTAACATTG AAATGTC AG AAGTGGCACATCATATAC AAAATTAAC AGTATCGTACCAGANATCGGAATAATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAGGNCAAAATCACATTCCCATACACAAGGNTTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCT ]
[+] EMBL CD139103 [ atgcgtAATGTTAGGAAAGTGGCAGACCATATCTTTAAATCAGTACGTTTCAAACCAGAAATCGGGATCATTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATATGGTACTCG ATTCCCAGCACTTTCGAATGCC ]
[+] EMBL AI018958 [ AGAAATCGGAATAATTTCTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTNATGCAAGGCCGGTTTCACATGTACGAGGGATATAGCAATGTCACGGTCGCTCTCCCCATACGCGTTATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGc ]
[+] EMBL AI018960 [ GAAATCGGAATAATTTGTNGAAGTNGTCTGGGAAAGTTGGCTGATGGAGTNAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTNGCCGAAAAGTAGTTGTNATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTTATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTC ]
[+] EMBL SMT14637 [ ggaagGGAATAATTTTTGG AGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACAC AAGA TCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGA ]
[+] EMBL AI974960 [ TTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAA ]
[+] EMBL CD202725 [ AAAGACAAAATCACAATCCCATACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCC ]
[-] EMBL CD133694 [ ATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATATTTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGATAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCAC ]
[-] EMBL CD190666 [ AAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGGGATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAATTTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGC ]
[+] EMBL CD191722 [ ATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGGTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCC ]
[-] EMBL CD141056 [ ATGAAGTTATTGGGAGTCAGAATTCTTATGGTTAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTTACAGCACTTTCGAATGCCTATGATAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAGCGAC TTTGAGAATATGGTTCACC A GGGTGTTTTCGTTATGAATGGTGATCCTTGTTACAAAGCATTCTGCTGAGTTCGCGATGCTGCTTAACATGGGAGGTGATGTAGTCGGTATGAG ]
[+] EMBL CD120080 [ AAGTTATTGGGAGTCAAAATTCTTATGGTCAGTAATGCTGC TGGTGGTCTCAACAGAAGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACT ]
[+] EMBL AI976065 [ AGTC TCAAACTCGGTGACTTCGTGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTNTC ]
[+] EMBL CD139202 [ AATATTTTGGTCGGACCGAATCAGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACAGGGTGCTC ACGTGCTGAATTGATGNCATCATGGTTTGAGAAAGAT ATTGA ]
[-] EMBL AI018903 [ AGGAGGAATTTGGTACTCG ATTCCCAGNACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAANAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCNTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ]
[-] EMBL SMT14600 [ AGGAGGAATTTGGTACTCG ATTCCCAGNACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAANAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCNTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ]
[-] EMBL CD064089 [ gtacccGGAGGAATTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACGAATATGAGTGTGCTGGATGTCGGAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTAC ]
[+] EMBL CD064341 [ TTTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGT ]
[+] EMBL CD165622 [ TTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCG ]
[+] EMBL CD165710 [ TTGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAGCTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCG ]
[-] EMBL CD130845 [ TGGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGG ]
[-] EMBL CD139125 [ TGGTACTCG GTT CCAGCACTTTCGAATGCTTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATCGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGCCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAACTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCT ]
[+] EMBL CD126784 [ TGGTACTCGAATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGG ]
[-] EMBL CD064102 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAAT ]
[-] EMBL CD064073 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTG AG AAACGGC TTTGGG ATTT GTTCACC A GGGTGTTTACGTTAT ]
[-] EMBL CD166580 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGG ATTT GTTCACC A GGGTGTTTACGTT ]
[-] EMBL CD064180 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGG ATTTGGTTCACCGA GGGTGTTTAC ]
[-] EMBL CD064373 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGT ACC A GGGTGcta ]
[-] EMBL CD064262 [ GGTACTCG ATTCCCAGCACTTTCGAATGCCTATGACAGAGACCTACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATT GTTCACC ATGGGTGTTTACGTTATGAATGTTCGTCga ]
[+] EMBL CD134777 [ AGCTGTGCAAGTAGCTGAAGAAAACGGC TTTGGGAATTTGGTTCACC A GGGTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACA CCTGCTGAGTGCACGATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCC ]
[-] EMBL AI018928 [ GATGCTGCTTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTG TTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ]
[-] EMBL SMT14556 [ TCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGCACTGTGGAATTCAAGTGTTCGCTG TTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTGATTGTCTTTAGTAAATTTT]
[-] EMBL SMT14636 [ TGT GAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCGAAAGCG ATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAAGAA TTTCTCTCTTTGTGTACTTGCTGAAATGAATATTTTAACTTATAAAGTTTTC ]
[-] EMBL AI018959 [ GTGCTGGATGTCGAAAGCGAATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACA GGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAG AAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAAGCTTTGTGAANNATTTTCTCCCTTTGTG ]
consensusID : consensus_11199#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 299 fasta sequence
[CCGCCCTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGGCACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCGAAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN]
[-] EMBL SMW714 [CCGCCCTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGGCACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCGAAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAATTGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTCACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN]
consensusID : consensus_11199#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 167 fasta sequence
[TGAGCGACCATGAGAGTCTGGCACAGGTGCTCACGTGCTGATTGATGCATCATGGTTTGAGAGATATTGAAAACTGCCCAAGATTGATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAA]
[+] EMBL AA960684 [TGAGCGACCATGAGAGTCTGGCACAGGTGCTCACGTGCTGATTGATGCATCATGGTTTGAGAGATATTGAAAACTGCCCAAGATTGATTGGATGTCACACTTAGTGTTTTGTGCAATGAATCAGCTTTGTGAACAATTTTCTCTCTTTGTGTACTTGCTGAAATGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11199#0 GATAATACAAAAGTTTCTGCTTGAAAATGCATGAGTCAGTAACTGCTAACATTGAAAATG 60
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TCAAGAAAGTGGCACATCATATACAAAAATTAACAAGTATCGTACCAGAAATCGGAATAA 120
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TTTGTGGAAGTGGTCTGGGAAAGTTGGCTGATGGAGTGAAAGACAAAATCACAATCCCAT 180
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 ACACAAAGATTCCCAACTTCCCTCAAACGTCTGTTGTTGGACACTCTGGAAACCTGATAT 240
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TTGGAACTCTGAGTGGCCGAAAAGTAGTTGTGATGCAAGGACGGTTTCACATGTACGAGG 300
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 GATATAGCAATGACACGGTCGCTCTCCCCATACGCGTGATGAAGTTATTGGGAGTCAAAA 360
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TTCTTATGGTTAGTAATGCTGCTGGTGGTCTCAACAGAAGTCTCAAACTCGGTGACTTCG 420
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TGATCTTGAAAGACCACATTTACCTTCCTGGACTAGGATTAAATAATATTTTGGTCGGAC 480
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 CGAATCAGGAGGAATTTGGTACTCGATTCCCAGCACTTTCGAATGCCTATGACAGAGACC 540
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 TACGAAAACTAGCTGTGCAAGTAGCTGAAGAAAACGGCTTTGGGAATTTGGTTCACCAGG 600
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 GTGTTTACGTTATGAATGGTGGTCCTTGTTACGAAACACCTGCTGAGTGCACGATGCTGC 660
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 -------------------------------------------------------CCGCC 5
consensus_11199#0 TTAACATGGGTTGTGATGTAGTCGGTATGAGTACGATTCCGGAAGTTGTAATTGCCCGGC 720
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 CTAACATGGGTTGTGATGNAGCCGGTATGAGTACGAATCCCGGAAGTTGTAATTGCCCGG 65
consensus_11199#0 ACTGTGGAATTCAAGTGTTCGCTGTTTCACTAGTTACAAATATAAGTGTGCTGGATGTCG 780
consensus_11199#2 ------------------------------------------------------------
consensus_11199#1 CACTGTGGAANTCAAGTGTTCGCTGTTCACCAGTGACAAACAAAAGTGTGCNGGATGNCG 125
consensus_11199#0 AAAGCGATTTGAAGCCGAACCATGAAGAAGTCTTGGCCACAGGTGCTCAACGTGCTGAAT 840
consensus_11199#2 ---------------TGAGCGACCATGAGAGTCTGGC-ACAGGTGCTCA-CGTGCTGA-T 42
consensus_11199#1 AAANCGATTTGAAGCCGAACCATGAAGAANTCAGGGCCAAAGGTGCTCAACGTGCTGAAT 185
** * * * ** *** * ********* ******** *
consensus_11199#0 TGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTC 900
consensus_11199#2 TGATGCA-TCATGGTTTGAGA-GATATT--GAAAACTGCCCAA-GATTGA-TTGGATGTC 96
consensus_11199#1 TGATGCAATCATGGTTTGAGAAGATAATTGAAAAACTGCCCAAAGATTGAATTGGATGTC 245
******* ************* **** * ************ ****** *********
consensus_11199#0 ACACTTA-GTGTTTT-GTGCAATGAATCAAGCTTTGTGAACAATTTTCTCTCTTTGTGTA 958
consensus_11199#2 ACACTTA-GTGTTTT-GTGCAATGAATCA-GCTTTGTGAACAATTTTCTCTCTTTGTGTA 153
consensus_11199#1 ACACTTAAGTGTNTTTGTGCAATGAATCAAGCTTTGTGAACGATGTCTCCNTTN------ 299
******* **** ** ************* *********** ** * * *
consensus_11199#0 CTTGCTGAAATGAATATTTTAACTTATAAAGTTTTCTGTCTAGACAACGACTTTGTTTTG 1018
consensus_11199#2 CTTGCTGAAATGAA---------------------------------------------- 167
consensus_11199#1 ------------------------------------------------------------
consensus_11199#0 ATTGTCTTTAGTAAATTTT 1037
consensus_11199#2 -------------------
consensus_11199#1 -------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||