These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11206#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 955 fasta sequence [GAGTAGAGGTGTGATGTGGTTGGGTGTGACTGTCGCCCATTACTTGTCAGATGAGGATTGGTCTGACCAACTCACCATTGACACGTCATCCACACAACCACTACAAAACAGAAATCATGACAACACCAATATAATGCATAGGTCTCACACAGTCACAATCTAGCACCAAATACTGCACACTACACACTCGAGCTTAATACACTCCATGATCTCTTTCACTTTCAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTAATCTCGTTCACACACTTGTTTCCTTAATTGACGTGTTGTGGAATGTTGATGAGATCGGTGACTAGTCGTATGTGTAGGCATTCGACACCACATCAGATCACTTGACAACACCGTTACTTGTCGATCGAGTGTTGGATGTGGTGGAAATGTGTCAACTGGACAATGTGCCTGTGTGCGTGTTCTTGTGTGTTTGTGAATCTGTCTGAAGTGTAGTGACCAACACTAGTGGATAACGCATCGACGATGATGCATGGAAGTCACGAGGTGTTGTCCAATGCATGCAATGTGTGCTCACCCAATCATATGCATGTGGAGATTGACAGTCAGTATATGTGAGTGACAATGGGTGAGTGACCTGATGTAGATGTGACTGGGATTCCGACCGAGGTTGTCAACAGCAAATATGTGTGTTGACTGAATGGTGCATTGTGACTGCAGACAACGTCGATGAGCTGACTGATTGACAAGTTGTGTGAATGTGTGATATGAGATGCTGTGAAAATCTGTGACGTGAGAATGAACACACCACCAACTGTCATTGTATGTATTTTCAGTGGATTCAGTGAGTAGAGATGATCCCTGCACG] [+] EMBL CD084853 [GAGTAGAGGTGTGATGTGGTTGGGTGTGACTGTCGCCCATTACTTGTCAGATGAGGATTGGTCTGACCAACTCACCATTGACACGTCATCCACACAACCACTACAAAACAGAAATCATGACAACACCAATATAATGCATAGGTCTCACACAGTCACAATCTAGCACCAAATACTGCACACTACACACTCGAGCTTAATACACTCCATGATCTCTTTCACTTTCAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTAATCTCGTTCACACACTTGTTTCCTTAATTGACGTGTTGTGGAATGTTGATGAGATCGGTGACTAGTCGTATGTGTAGGCATTCGACACCACATCAGATCACTTGACAACACCGTTACTTGTCGATCGAGTGTTGGATGTGGTGGAAATGTGTCAACTGGACAATGTGCCTGTGTGCGTGTTCTTGTGTGTTT ] [+] EMBL CD084914 [gcGTAGAGGTGTGATGTGGTTGGGTGTGACTGTCGCCCATTACTTGTCAGATGAGGATTGGTCTGACCAATTCACCATTGACACGTCATCCACACAACCACTACAAAACAGAAATCATGACAACACCAATATAATGCATAGGTCTCACACAGTCACAATCTAGCACCAAATACTGCACACTACACACTCGAGCTTAATACACTCCATGATCTCTTTCACTTTCAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTAATCTCGTTCACACACTTGTTTCCTTAATTGACGTGTTGTGGAATGTTGATGAGATCGGTGACTAGTCGTATGTGTAGGCATTCGACACCACATCAGATCACTTGACAACACCGTTACTTGTCGATCGAGTGTTGGATGTGGTGGAAATGTGTCAACTGGACAATGTGCCTGTGTGCGTGTTCTTGTGTGTTT ] [+] EMBL CD069046 [ TGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTAATCTCGTTCACACACTTGTTTCCTTAATTGACGTGTTGTGGAATGTTGATGAGATCGGTGACTAGTCGTATGTGTAGGCATTCGACACCACATCAGATCACTTGACAACACCGTTACTTGTCGATCGAGTGTTGGATGTGGTGGAAATGTGTCAACTGGACAATGTGCCTGTGTGCGTGTTCTTGTGTGTTTGTGAATCTGTCTGAAGTGTAGTGACCAACACTAGTGGATAACGCATCGACGATGATGCATGGAAGTCACGAGGTGTTGTCCAATGCATGCAATGTGTGCTCACCCAATCATATGCATGTGGAGATTGACAGTCAGTATATGTGAGTGACAAT ] [-] EMBL CD129757 [ ACGAGGTGTTGTCCAATGCATGCAATGTGTGCTCACCCAATCATATGCATGTGGAGATTGACAGTCAGTATATGTGAGTGACAATGGGTGAGTGACCTGATGTAGATGTGACTGGGATTCCGACCGAGGTTGTCAACAGCAAATATGTGTGTTGACTGAATGGTGCATTGTGACTGCAGACAACGTCGATGAGCTGACTGATTGACAAGTTGTGTGAATGTGTGATATGAGATGCTGTGAAAATCTGTGACGTGAGAATGAACACACCACCAACTGTCATTGTATGTATTTTCAGTGGATTCAGTGAGTAGAGATGATCCCTGCACG] consensusID : consensus_11206#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 34 consensus length = 674 fasta sequence [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG-GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA-GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGG] [+] EMBL CD064654 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGCGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCA GACCGGAGACGATGAGACTAGAGACACTTCAACAGACTCTGACTCGATCGGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGACCGTCAGACCGGAGACGATGAGACCAGAGACACTTCGACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTC ] [+] EMBL CD064660 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCAATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGACGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGA ] [+] EMBL CD166912 [TCTCGACACACAGGTGTGAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTGAACAGACTCTGACTCAATCAGTCACATGGGTGCTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACATACAGGTGTCAAGTGAACAACCAGggt ] [+] EMBL CD064761 [TCTCGACACACAGATGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGT ] [+] EMBL CD064681 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGCGCCAGTGAGG ] [+] EMBL CD126958 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGAAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCCTCAGACTCTGACTCGATCAGTC ] [+] EMBL CD064863 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTG ] [+] EMBL CD126853 [TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCGGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGAC ] [+] EMBL CD064847 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGCTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGTACAATCAGCATCGACGAGTGAACGTCAGACCGGAG ] [-] EMBL CD064767 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGCCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGA ] [-] EMBL CD064667 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGTCTCGATCAGTCACATGGGTGTTGGCGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGA ] [-] EMBL CD166934 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGT ] [-] EMBL CD064763 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGGCGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGA ] [-] EMBL CD126937 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATgggga ] [-] EMBL CD086654 [ ACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTT ] [-] EMBL CD086616 [ TCAGACCGAAGACGATGAGACCAGAGACACTTCAACAGATTTTGACTCGATCAGTCACATGAGTGTTGGTGTCG GTCCCAGTGAGGAGAATTTTCTGGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GCCCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGNAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTT ] [-] EMBL CD086642 [ CAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTCGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTT ] [-] EMBL CD064644 [ GAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGA ] [+] EMBL CD088961 [ ACGATAAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCC ] [+] EMBL CD088955 [ ACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGTGACGATGAGACCAGAGACACTTCTACAGACTCTG ] [+] EMBL CD181795 [ TGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGT ] [-] EMBL CD086623 [ GAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTGGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCAATCAGTCACATGGGTGTT ] [+] EMBL CD064877 [ GATCAGTCACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACTAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTAAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACTAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGG] [-] EMBL CD146198 [ CACATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTC ] [+] EMBL CD138560 [ CATGGGTGTTGGTGTCG GTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGGGTGAACATCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGAC ] [+] EMBL CD064568 [ ccGGTATCGAGTG CTGTGAGGAGAATCTTCTCGACACACAGGTGTCTAGTGAACAACCAGCATCGACGAGTGAACGTCAGGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGACGAGAATCTTCTCGACACACAGGTGTCAAGTGATCAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGCTGTTGGTGTCGGTGCCCGTGAGGCGAATCTTCTCGACAGACAGGTGTCAAGTGATGAATCTGCTTCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTG ] [+] EMBL CD166919 [ GAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGA ] [+] EMBL CD064744 [ ATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCA GAGCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTCGGTGTCGGTGCCAGTAAGGATAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGAATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTCGG ] [-] EMBL CD145673 [ AACATCA GACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATATTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCTACGAGTGTACATCAGACCGGAGACGATGAGACCAGA ] [+] EMBL CD088893 [ ACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCATTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCCGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACA ] [-] EMBL CD064683 [ acccGACCAGAGACACTTCAACAGACTCTGACTCGATAAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACGTGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACACCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGA ] [+] EMBL CD166930 [ TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGggt ] [+] EMBL CD088946 [ ACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATCAGT ] [-] EMBL CD166983 [ CTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACATCAGACCGGAGACGATGAGACCAGAGACACTTCAACAGACTCTGACTCGATC ] consensusID : consensus_11206#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 148 fasta sequence [GTATTGGTGTCTGTGACTGATCGAGTCAGAGTCTGTTGAAGTGTCTCTGGTCTCATCGTCTCCGGTCTGACGTTCACGTCGTCGATGCTGGTTGTTCACTTGACACCTGTGTGTCGAGAAGATTCTCCTCACTTGGACCGACACCTAA] [+] EMBL CD064621 [GTATTGGTGTCTGTGACTGATCGAGTCAGAGTCTGTTGAAGTGTCTCTGGTCTCATCGTCTCCGGTCTGACGTTCACGTCGTCGATGCTGGTTGTTCACTTGACACCTGTGTGTCGAGAAGATTCTCCTCACTTGGACCGACACCTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11206#0 GAGTAGAGGTGTGATGTGGTTGGGTGTGACTGTCGCCCATTACTTGTCAGATGAGGATTG 60 consensus_11206#1 ------------------------------------------------------------ consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 GTCTGACCAACTCACCATTGACACGTCATCCACACAACCACTACAAAACAGAAATCATGA 120 consensus_11206#1 ---------TCTCGACACACAGGTGTCAAGTGAACAACCAGCATCGACGAGTGAACGTCA 51 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 CAACACCAATATAATGCATAGGTCTCACACAGTCACAATCTAGCACCAAATACTGCACAC 180 consensus_11206#1 GACCGGAGACGATGAGACCAGAG---ACACTTCAACAGACTCTGACTCGATCAGTCACA- 107 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 TACACACTCGAGCTTAATACACTCC--ATGATCTCTTTCACTTTCAGGTGTCAAGTGAAC 238 consensus_11206#1 TGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCGACACACAGGTGTCAAGTGAAC 167 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 AACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAG 298 consensus_11206#1 AACCAGCATCGACGAGTGAACGTCAGACCGGAGACGATGAGACCAGAGACACTTCAACAG 227 consensus_11206#2 -----------------GTATTGGTGTCTGTGACTGATCGAGTCAGAGTCTGTTGAAGTG 43 * * * * * *** ***** * ** ** * consensus_11206#0 ACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCG 358 consensus_11206#1 ACTCTGACTCGATCAGTCACATGGGTGTTGGTGTCGGTGCCAGTGAGGAGAATCTTCTCG 287 consensus_11206#2 TCTCTGGTCTCATC-GTCTCCGGTCTGACGTTCACGTCGTCGATGCTGGTTGTTCACTTG 102 ***** *** *** * * ** * * ** * * ** * * ** * consensus_11206#0 ACACACAGGTAATCTCGTTCACACACTTGTTTCCTTAATTGA-CGTGTTGTGGAATGTTG 417 consensus_11206#1 ACACACAGGTG-TCAAGTGAACA-ACCAGCATCGACGAGTGAACGTCAGACCGGA-GACG 344 consensus_11206#2 ACACCTGTGTG---TCGAGAAGATTCTCCTCACTTGGACCGA-CACCTAA---------- 148 **** ** * * * * * * ** * consensus_11206#0 ATGAGATCGGTGACTAGTCGTATGTGTAGGCATTCGACACCACATCAGATCACTTGACAA 477 consensus_11206#1 ATGAGACCAGAGACACTTCAACAGACTCTG-ACTCGA--TCA-GTCACATGGGT-GTTGG 399 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 CACCGTTACTTGTCGATCGAGTGTTGGATGTGGTGGAAATGTGTCAACTGGACAATGTGC 537 consensus_11206#1 TGTCGGTGCCAGTGAGGAGAATCTT---CTCGACACACAGGTGTCAAGTGAACAACCAGC 456 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 CTGTGTGCGTGTTCTTGTGTGTTTGTGAATCTGTCTGAAGTGTAGTGACCAACACTAGTG 597 consensus_11206#1 ATCGACGAGTGAAC--GTCAGACCG-GAGACGAT---GAGACCAGAGAC--ACTTCAACA 508 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 GATAACGCATCGACGATGATGCATGGAAGTCACGAGGTGTTGTCCAATGCATGCAATGTG 657 consensus_11206#1 GACTCTGACTCGATCA-GTCACATGGGTGTT----GGTGT----CGGTGCCAGTGAGGAG 559 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 TGCTCACCCAATCATATGCATGTGGAGATTGACAGTCAGTATATGTGAGTGA-CAATGGG 716 consensus_11206#1 AATCTTCTCGA-CACACAGGTGTCAAG-TGAACAACCAGCATCGACGAGTGAACATCAGA 617 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 TGAGTGACCTGATGTAGATGTGACTGGGATTCCGACCGAGGTTGTCAACAGCAAATATGT 776 consensus_11206#1 CCGGAGAC--GATG-AGACCAGA--GACACTTCAACAGACTCTGACTCGATCAGTCACAT 672 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 GTGTTGACTGAATGGTGCATTGTGACTGCAGACAACGTCGATGAGCTGACTGATTGACAA 836 consensus_11206#1 GG---------------------------------------------------------- 674 consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 GTTGTGTGAATGTGTGATATGAGATGCTGTGAAAATCTGTGACGTGAGAATGAACACACC 896 consensus_11206#1 ------------------------------------------------------------ consensus_11206#2 ------------------------------------------------------------ consensus_11206#0 ACCAACTGTCATTGTATGTATTTTCAGTGGATTCAGTGAGTAGAGATGATCCCTGCACG 955 consensus_11206#1 ----------------------------------------------------------- consensus_11206#2 ----------------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||