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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11209#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 37 consensus length = 1157 fasta sequence
[TATGTATCCCTTCTCCATGTAACGGATCTTTATCTAAACCAGAAAGTAACAGTGATGAGTCGTGTCAGGTCGATAAACCTGAAACAGGTAGGGATGTTAATGGTTGCAGACCTACTG-ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG-GATG-AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT-CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA-AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC-CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC-AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAGTTTC-CATTAATC-CTCCAAATAT-TTGTGTT-TGACAGTCTCCTCAGTCCTTGCTTTGTGGTACTGTTGGAACACCTGTGTCTTTAGAAGCTTCAGGTGACGTTAAGTACTCACTATCTGTTCCTACTGTTACTAATGATCAAAATTGCTCACAAACAAATTCCTCGGTAGCCTTTCGCCATCCCATTATTCCTGTCAATACAACTTCCCCCATGCTCCCCACATCTTCCATAGGTGTATCCAGTCACGGTCTTCCAGTG]
[+] EMBL CD117228 [TATGTATCCCTTCTCCATGTAACGGATCTTTATCTAAACCAGAAAGTAACAGTGATGAGTCGTGTCAGGTCGATAAACCTGAAACAGGTAGGGATGTTAATGGTTGCAGA CTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAGGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAATCGCACGGAATGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGCAGAGCACCAGAGTCTACTGTTACGTCCTCACCAAAT CCTATACTTAATACTCCTAGCTCTGAACTTATAAATTCTGCGACAATTTCTCCAACTCCGTCTCCTCACTCCAACAATTCAAATTCTTCCGTGCTTCAAACCTGAA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGG ]
[+] EMBL CD127602 [ tATGTTAATGGTTGCTTACCTACTG ATGTCTCCCCGACTC CCATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[+] EMBL CD128058 [ GTTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[+] EMBL CD127329 [ GTTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[+] EMBL CD127514 [ GTTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAa ]
[+] EMBL CD127127 [ GTTGCAGACCTACTG ATGTCTCTCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTC ]
[+] EMBL CD127214 [ GTTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACATCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[+] EMBL CD128158 [ GTTGCAGACCTACCG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCCCGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCTGACTCTTCCTCTAACCCCGTATTTCAG ]
[+] EMBL CD127226 [ GTTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGGTTCTTTCGTCCAGNTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[-] EMBL CD127838 [ TTGCAGACCTGCTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCCCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTATTCCTCTAACCCCaccta ]
[-] EMBL CD127495 [ TTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTA TTCAG ]
[-] EMBL CD127579 [ TTGCAGACCTACTG ATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCGGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTA TTCAGGTTTCTCAGCA ]
[-] EMBL CD127767 [ TTGCAGACCTACTGAATGTCTCCCCGACTCACGATCAGGAGCGTGTTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTAAAACAGG ]
[-] EMBL CD114244 [ CCCCGACTCACGATCAGGAGCGGGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTC ]
[-] EMBL CD124571 [ GTGCTAAGATGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATCATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTT ]
[-] EMBL CD155593 [ TGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTCTCTTTCGTCCAGTTATGCTC ]
[-] EMBL CD155628 [ TGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTCTCTTTCGTCCAGTTATGCTC ]
[-] EMBL CD089763 [ TGGACTTGGATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGCGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTC ]
[+] EMBL CD111861 [ ATAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTANATTCTCCCGTGCTTNCAACCTGTANAAACTC AGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTCAT ]
[+] EMBL CD095312 [ TAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACATCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCA ]
[+] EMBL CD095186 [ TAAGTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTC ]
[+] EMBL CD182358 [ TATGTTGATATGCAAACATTTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAATCCCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCT ]
[+] EMBL CD095648 [ GTTG GATG AAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATGAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTACAAATACC ]
[+] EMBL CD182819 [ TTGGGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACATTTTC ]
[+] EMBL CD182752 [ TTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTCCGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACATTTTC ]
[+] EMBL CD164694 [ TTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCA ]
[-] EMBL CD164686 [ TGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTA AAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCAT ]
[-] EMBL CD164642 [ TGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACA ]
[+] EMBL CD092524 [ AGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAAT CCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTGCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTG AAA ]
[+] EMBL CD127631 [ AGCTGTGTCTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAAC CCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAG ]
[-] EMBL CD152375 [ AGTGGATCAAACTCCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAGTTTC CATTAATC CTCCAAATAT TTGTGT ]
[-] EMBL CD152272 [ GTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTAATGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAGTTTC CATTAATC CTCCAAATAT TTGTGT ]
[-] EMBL CD152352 [ GTCTCTGCTCATTATGGAAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAAGCCACCCATTTCCACTCAAGCAGTTTCACATAAATCACTCCAAATATGTTGTAGT TGA ]
[-] EMBL CD152314 [ CTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACCATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAGTTTC CATTAATC CTCCAAATAT TTGTGT ]
[-] EMBL CD168007 [ GTTTCATCCCAGCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCC ]
[-] EMBL CD164118 [ ACAAGCTCAGTTTAC AATACCACATTCCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAACTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATAC ]
[-] EMBL CD190457 [ GTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACATCCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAGTTTC CATTAATC CTCCAAATAT TTGTGTTGTG CAGTCTCCTCAGTCCTTGCTTTGTGGTACTGTTGGAACACCTGTGTCTTTAGAAGCTTCAGGTGACGTTAAGTACTCACTATCTGTTCCTACTGTTACTAATGATCAAAATTGCTCACAAACAAATTCCTCGGTAGCCTTTCGCCATCCCATTATTCCTGTCAATACAACTTCCCCCATGCTCCCCACATCTTCCATAGGTGTATCCAGTCACGGTCTTCCAGTG]
consensusID : consensus_11209#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence
[TTGCAGACCTACTGATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTGGATGAAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAATCCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGGCAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTAAAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAACCCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTGAGACTCTTCCTCTAACCCCGTATTTAAGGTTTCTCAGCACCTACCTATTGCCTA]
[-] EMBL CD127884 [TTGCAGACCTACTGATGTCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTGGATGAAACAATTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTACCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAATCCTAGAGTTAATACTCCTAGTTCTGAACTTATAAATTCTCCGGCAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATTTAAATTCTCCCGTGCTTCAAACCTGTAAAACTCAAGCTGTGTTTCAATCCAACTCCTCATGCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAACCCATGGGATTATTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTTCTTTCGTCCAGTTATGCTGAGACTCTTCCTCTAACCCCGTATTTAAGGTTTCTCAGCACCTACCTATTGCCTA]
consensusID : consensus_11209#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence
[TAAAGATCCGTTACATGGAGAAGGATACATACAGCATCTGGTATTAAATTGCTTGCAGGTGAAGGTGAGTTATTTACTACTTTCGTTGCAGAACAAGGAAAAGCCTTATCATTGAGATCAGGTTTGAGAAGTACACTTGTGTCACCTACTTCAGGAGCTGCTGGTTTTTCGTTGTTATTCAGTACTTTTGAGTGGTCAAACTCAGATCTATCAACANATCCAGATGATATGTCCGATGGGACCAAACGATTGCA]
[+] EMBL CD189700 [TAAAGATCCGTTACATGGAGAAGGATACATACAGCATCTGGTATTAAATTGCTTGCAGGTGAAGGTGAGTTATTTACTACTTTCGTTGCAGAACAAGGAAAAGCCTTATCATTGAGATCAGGTTTGAGAAGTACACTTGTGTCACCTACTTCAGGAGCTGCTGGTTTTTCGTTGTTATTCAGTACTTTTGAGTGGTCAAACTCAGATCTATCAACANATCCAGATGATATGTCCGATGGGACCAAACGATTGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11209#0 TATGTATCCCTTCTCCATGTAACGGATCTTTATCTAAACCAGAAAGTAACAGTGATGAGT 60
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CGTGTCAGGTCGATAAACCTGAAACAGGTAGGGATGTTAATGGTTGCAGACCTACTGATG 120
consensus_11209#1 -------------------------------------------TTGCAGACCTACTGATG 17
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTGGATGAAACAA 180
consensus_11209#1 TCTCCCCGACTCACGATCAGGAGCGTGCTAAGATGGACTTGGATAAGTTGGATGAAACAA 77
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTA 240
consensus_11209#1 TTGACTATGTGTTGTCAGTCGCACGGAGTGACGAGCCTTGTGAAGGGATGTTTGTACTTA 137
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAATCCTAGAGTTAATACTCCTA 300
consensus_11209#1 CCTGTAGAGCACGAGAGTCTACTGTTACGTCCTCACCAAATCCTAGAGTTAATACTCCTA 197
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GTTCTGAACTTATAAATTCTCCGACAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATT 360
consensus_11209#1 GTTCTGAACTTATAAATTCTCCGGCAATTTCTCCAGCTCCGTCTCCTCACTCCAACAATT 257
consensus_11209#2 -------------------------------TAAAGATCCGTTACATGGAGAAGGATACA 29
* ** ***** * * *
consensus_11209#0 TAAATTCTCCCGTGCTTCAAACCTGTAAAACTCAAGCTGTGTTTCAATCCAACTCCTCAT 420
consensus_11209#1 TAAATTCTCCCGTGCTTCAAACCTGTAAAACTCAAGCTGTGTTTCAATCCAACTCCTCAT 317
consensus_11209#2 TACAGCATCTGGTA-TTAAATTGCTTGCAGGTGAAGGTGAGTTATT-TACTACTTTCGTT 87
** * ** ** ** ** * * * *** ** *** * * *** *
consensus_11209#0 GCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAACCCATGGGATTA 480
consensus_11209#1 GCAGCATGGTGTCCCCACAACCTATGCAACGTTATATAGTGGATCAAACCCATGGGATTA 377
consensus_11209#2 GCAGAACAAGGA----AAAGCCT---TATCATTG------AGATCAGGTTTG-AGAAGTA 133
**** * * * * *** * * ** ***** * * **
consensus_11209#0 TTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTT 540
consensus_11209#1 TTCAGTTGTCATCAAATCCATCTCAGTGTGTCTCTGCTCATTATGGTAACCAGGGTGTTT 437
consensus_11209#2 CACTTGTGTCAC-----CTACTTCAGGAGCTGCTGGTTTTTCGTTGTTATTCAG----TA 184
* ***** * * **** * * * * * ** * * *
consensus_11209#0 CTTTCGTCCAGTTATGCTCAGACTCTTCCTCTAACCCCGTATTTCAGGTTTCTCAGCACC 600
consensus_11209#1 CTTTCGTCCAGTTATGCTGAGACTCTTCCTCTAACCCCGTATTTAAGGTTTCTCAGCACC 497
consensus_11209#2 CTTTTGAGTGGTCAAACTCAGA-TCTATCAACANATCCAGATGATATGTCCGATGGGACC 243
**** * ** * ** *** *** * * ** ** * ** * ***
consensus_11209#0 ATATCGTTTCACAAATCAGTCAGCCTCTAACAACAAATACACACGTCTTGTTTCATCCCA 660
consensus_11209#1 TACCTATTGCCTA----------------------------------------------- 510
consensus_11209#2 AAACGATTGCA------------------------------------------------- 254
** *
consensus_11209#0 GCATGCTACATAGCTTTCAGAATCATCCAGGGCAACAAGCTCAGTTTACAATACCACATT 720
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CCACATTGCCTACTGCTTCAGTTCAAAGAATAAGTACTCCAATTTTATCTCCTGTACGAA 780
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CTAGCGTCTTACAAAACGTTGTTAATCAAGTTGCCAAATCTTCAGATACCAACATAACAT 840
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CCTATCCTGTATCTAATCACATCATAGAAAGTACAAATCCACCCATTTCCACTCAAGCAG 900
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 TTTCCATTAATCCTCCAAATATTTGTGTTTGACAGTCTCCTCAGTCCTTGCTTTGTGGTA 960
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CTGTTGGAACACCTGTGTCTTTAGAAGCTTCAGGTGACGTTAAGTACTCACTATCTGTTC 1020
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CTACTGTTACTAATGATCAAAATTGCTCACAAACAAATTCCTCGGTAGCCTTTCGCCATC 1080
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 CCATTATTCCTGTCAATACAACTTCCCCCATGCTCCCCACATCTTCCATAGGTGTATCCA 1140
consensus_11209#1 ------------------------------------------------------------
consensus_11209#2 ------------------------------------------------------------
consensus_11209#0 GTCACGGTCTTCCAGTG 1157
consensus_11209#1 -----------------
consensus_11209#2 -----------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||