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Schistosoma mansoni
cluster # 11213 cluster # 11213       Sequences # 39       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11213#0 length = 987 sequences # 32  
consensus_11213#1 length = 571 sequences # 6  
consensus_11213#2 length = 291 sequences # 1  

consensusID : consensus_11213#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 32
consensus length = 987
fasta sequence
                              [TTCGGCACGCAGAAAAATATCCCCAGAGTTTAAAAGAGCATTATAACTAAATGCCACAGAAATCAAAAACTGTGGAATTAAACTAAAAAGTACAGACACAAATCAAACTAGAACAAGAAGATCAAATATTCAACGGACATTCCCTAACACAAGTATCATTGAAAAATGGCAAGTTTCATTGCAAAACAACTAATTGGAAATCAGT-TGGATTCAGTGAAGGGTGCATTAGGTGATAAGAAAGATGAAGGTGAAGGTGTTTTAG-GTGGACGTAAAGAAATTGATCCAG-AAGTTGAAGCTGCAT-TACGTGAGGCAGAAGAAAAACGAGAAGC-TAAAC-ATCGTAAAATGGAAGAAGA-ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG-AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT--AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT-CGATACAA-TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGGCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATC]

[+] EMBL CD081566             [TTCGGCACGCAGAAAAATATCCCCAGAGTTTAAAAGAGCATTATAACTAAATGCCACAGAAATCAAAAACTGTGGAATTAAACTAAAAAGTACAGACACAAATCAAACTAGAACAAGAAGATCAAATATTCAACGGACATTCCCTAACACAAGTATCATTGAAAAATGGCAAGTTTCATTGCAAAACAACTAATTGGAAATCAGT TGGATTCAGTGAAGGGTGCATTAGGTGATAAGAAAGATGAAGGTGAAGGTGTTTTAC GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATG                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD132686             [                                                                                   TAAAAAGTACAGACACAAATCAAACTAGAACAAGAAGATCAAATATTCAACGGACATTCCCTAACACAAGTATCATTGAAAAATGGCAAGTTTCATTGCAAAACAACTAATTGGAAATCAGT TGGATTCAGTGAAGGGTGCATTAGGTGATAAGAAAGATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD167417             [                                                                                                                                            TCCCTAACACAAGTAT ATTGAAAAATGGCAAGTTTCATTGCGAAACAACTAATTGGAAATCAGT TGGATTCAGTGAAGGGTGCATTAGGTGATAAGAAAGATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGCGTAAACGATCGTAAAATGGAAGAAGACACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG ACAAAAGACGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD167389             [                                                                                                                                                     CAAGT TCATTGAAAAATGGCAAGTTTCATTGC ATACAACTAATTGGAAATCAGTATGGATTCGGTGAAGGGTGCATTAGGTGATAAGAAAGATGAAGGTGACGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACCAATATGGTATTAAG AAAAAAGAAGAAGAGGTGCCCGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAGAACACCAGCTGAACTAGCGGGTGAAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD117524             [                                                                                                                                                                                                                                               AAGA  AAGGTAAAGGTG TTTAGTGTGGACGTAAAGAAATTGATCCAGAAAGTTGAAGCTGCAT TACGTGAGGCAGAAAAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGACACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCATGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAGATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATC      T  ATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTC                                                                                                                             ]
[+] EMBL CD117167             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATACTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGGCTG                                                                                                                                       ]
[+] EMBL CD117667             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATC                                                                                                                                                                     ]
[+] EMBL CD117183             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATC                                                                                                                                                                                         ]
[+] EMBL CD117184             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA                                                                                                                                                                                                   ]
[+] EMBL CD117573             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGCCAATCTATCCATCCATCCATCCATCCATTCATCCATCCATCCATCCA                                                                                                                                                                                                               ]
[+] EMBL CD117415             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGTCCGATACAATTTCACAT                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD117730             [                                                                                                                                                                                                                                                 GATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGGAAAATGTCTTCTTATGTGATGTTTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATC                                                                                                                                                                                                                                                 ]
[-] EMBL CD117271             [                                                                                                                                                                                                                                                  ATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGCCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTTA AAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAA                                                                                                                                                                                                                                                                     ]
[-] EMBL CD116660             [                                                                                                                                                                                                                                                   TGAAGGTGAAGGTGTTTAGG GTGGACGTAAAGAAATTGATCCAG AAGTGGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGAAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTC                                                                                             ]
[+] EMBL CD178303             [                                                                                                                                                                                                                                                                  TTTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGCGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATA                                                                                                                                                                                                                                                                ]
[+] EMBL CD065233             [                                                                                                                                                                                                                                                                   TTAG GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATAAGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATC      T  ATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGNCTGTTTGGCTATCTATCTACCTAACTA                                                                                                           ]
[+] EMBL CD127419             [                                                                                                                                                                                                                                                                 aggTAG GTGGACGTAAAGAATTTGATCCAG AAGTTGAAGCTGCATCCACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGGCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGGCAATCTATCCATCCATCCATCCATC                                                                                                                                                                                                                                     ]
[-] EMBL CD095791             [                                                                                                                                                                                                                                                                        GTGGACGTAAAGAAATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATC TTT  TAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCC                                                                                                                                                                                                                                                    ]
[+] EMBL CD095655             [                                                                                                                                                                                                                                                                                      ATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTCCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTAT                                                                                                                                                                                                                                                                 ]
[+] EMBL CD095846             [                                                                                                                                                                                                                                                                                      ATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTTA AAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAACCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATC                                                                                                                                                                                                                                                         ]
[+] EMBL CD095963             [                                                                                                                                                                                                                                                                                      ATTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGGAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAGAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTC                                                                                                                                                                                                                                                             ]
[-] EMBL CD095751             [                                                                                                                                                                                                                                                                                       TTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAANCGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  GAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCC                                                                                                                                                                                                                                                ]
[-] EMBL CD095950             [                                                                                                                                                                                                                                                                                       TTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCC                                                                                                                                                                                                                    ]
[-] EMBL CD095760             [                                                                                                                                                                                                                                                                                       TTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAG TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCT                                                                                                                                                                                                                                                        ]
[-] EMBL CD095775             [                                                                                                                                                                                                                                                                                       TTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTTA AAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCA                                                                                                                                                                                                                                                            ]
[-] EMBL CD095787             [                                                                                                                                                                                                                                                                                       TTGATCCAG AAGTTGAAGCTGCAT TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATTATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATACAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCC                                                                                                                                                                                                                                            ]
[-] EMBL CD095728             [                                                                                                                                                                                                                                                                                       aTGATGCAG AAGTTGAAGCTGCA  TACGTGAGGCAGAAGAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATGAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAGATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAGAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACGA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTAACCATCCATCCATCCATCCATCCATCCATCCATCC                                                                                                                                                                                                                    ]
[+] EMBL CD116945             [                                                                                                                                                                                                                                                                                                                               GAAAAACGAGAAGC TAAAC ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT   AAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGGCTATCTAT                                                     ]
[+] EMBL CD178417             [                                                                                                                                                                                                                                                                                                                                                  C ATCGTAAAATGGAAGAAGA ACGAGAAGTAATGCGTCAAGGTATCGGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCC                                                                                                                                                                                                                                        ]
[-] EMBL CD116635             [                                                                                                                                                                                                                                                                                                                                                                         CGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAG AAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTTAAAAAAAAAAAATATATTATTTACTTCAAAACAATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTC                                                                                                                             ]
[+] EMBL CD116907             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGT CGATATAA TTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGT                                                                                                                              ]
[-] EMBL CD117103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAAATATATTATTCACTTTTAAACGATATAAACATGTATAATCATGT CGATACAA TTCACATCAAAGTAATTCTCCCATACAGATAGACAATCGATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAGCTATCTAATCTATCTGTCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATC]


>consensus_11213#0 TTCGGCACGCAGAAAAATATCCCCAGAGTTTAAAAGAGCATTATAACTAAATGCCACAGA AATCAAAAACTGTGGAATTAAACTAAAAAGTACAGACACAAATCAAACTAGAACAAGAAG ATCAAATATTCAACGGACATTCCCTAACACAAGTATCATTGAAAAATGGCAAGTTTCATT GCAAAACAACTAATTGGAAATCAGTTGGATTCAGTGAAGGGTGCATTAGGTGATAAGAAA GATGAAGGTGAAGGTGTTTTAGGTGGACGTAAAGAAATTGATCCAGAAGTTGAAGCTGCA TTACGTGAGGCAGAAGAAAAACGAGAAGCTAAACATCGTAAAATGGAAGAAGAACGAGAA GTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAAAAAGAAGAAGAGGTTCCA GCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCT GAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCTAACAAGTATGTTACCA GAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAA GCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTTAAAAAAAAAATATATTATTTA CTTTTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTG ACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA TCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA TCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTA TCTACCTAACTATCTAATCTATCTGGCTATCTATCTATCTGTCTGTCTGTCTATTTATCT ACCTATCTATCTGTCTGTTTGTCTATC



consensusID : consensus_11213#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 571
fasta sequence
                              [AGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATG-AAGCGGACGATGAA-AACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCA-TT--AAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGTCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCCACCTATTCAATCTATCTGT]

[-] EMBL CD117252             [AGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATG AAGCGGACGATGAA AACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCA TT  TTAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGTCTATCTATCTATCTGTCTGTCTGCCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATC                            ]
[-] EMBL CD117255             [                                                                                       agnnnaAAATGAAAGCGGACGATGAANAACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGTCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATC                            ]
[-] EMBL CD114157             [                                                                                                                                                    GAAATATGGCTAATAAAGTAACAGAAGTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCA TTTAAAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCTTCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGT                                                                                                                                                          ]
[-] EMBL CD197680             [                                                                                                                                                          TGGCTAATATAGTAACAGAAGTCCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCA TT  CAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGTCTATC                                                                                    ]
[-] EMBL CD117543             [                                                                                                                                                                         CAGAAGTTCCAGGACAAATAATTTCAGAAGTTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTT  AAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCAAAGTAATTATGACATAATa                                                                                                                                                                                                                                                       ]
[-] EMBL CD114268             [                                                                                                                                                                                                                                           tc  AAAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGTCGATACAATTCACATCACAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCAGTCTGTTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGTCTATCTATCAATCAGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCCACCTATTCAATCTATCTGT]


>consensus_11213#1 AGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAA ACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAAACATTCT AACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAGTTCCAGG AAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCATTAAAAAA AAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGATACAATTCA CATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCATCCATCCA TCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTA TCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCT GTCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCT ATCTATCTACCCACCTATTCAATCTATCTGT



consensusID : consensus_11213#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 291
fasta sequence
                              [AGTTGGATTCAGTGAAGGGTGCATTAGGTGATAAAAAAGATGAAGGTGAAGGTGTTTTAGGTGGACGTAAAGAAATTGATCCAGAAGTTGAAGCTGCATTACGTGAGGCAGAAGAAAAACGAGAAGCTAAACATCGTAAAATGGAAGAAGAACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTAACATACCTGGTA]

[-] EMBL CD075393             [AGTTGGATTCAGTGAAGGGTGCATTAGGTGATAAAAAAGATGAAGGTGAAGGTGTTTTAGGTGGACGTAAAGAAATTGATCCAGAAGTTGAAGCTGCATTACGTGAGGCAGAAGAAAAACGAGAAGCTAAACATCGTAAAATGGAAGAAGAACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTAACATACCTGGTA]


>consensus_11213#2 AGTTGGATTCAGTGAAGGGTGCATTAGGTGATAAAAAAGATGAAGGTGAAGGTGTTTTAG GTGGACGTAAAGAAATTGATCCAGAAGTTGAAGCTGCATTACGTGAGGCAGAAGAAAAAC GAGAAGCTAAACATCGTAAAATGGAAGAAGAACGAGAAGTAATGCGTCAAGGTATCAGAG ACAAATATGGTATTAAGAAAAAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTC CTGAAGGACGTCTTGGTCGTAAACGTAAAACACCAGCTAACATACCTGGTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11213#0      TTCGGCACGCAGAAAAATATCCCCAGAGTTTAAAAGAGCATTATAACTAAATGCCACAGA 60
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      AATCAAAAACTGTGGAATTAAACTAAAAAGTACAGACACAAATCAAACTAGAACAAGAAG 120
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      ATCAAATATTCAACGGACATTCCCTAACACAAGTATCATTGAAAAATGGCAAGTTTCATT 180
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      GCAAAACAACTAATTGGAAATCAGTTGGATTCAG--TGAAGGGTGCATTAGGTGATAAGA 238
consensus_11213#2      ----------------------AGTTGGATTCAG--TGAAGGGTGCATTAGGTGATAAAA 36
consensus_11213#1      -------AGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTG 53
                                             ** **  ***    *     ** *   ***   *    

consensus_11213#0      AAGATGAAGGTGAAG-GTGTTTTAGGTGGACG--TAAAGAAATTGATCCAGAAGTTGAAG 295
consensus_11213#2      AAGATGAAGGTGAAG-GTGTTTTAGGTGGACG--TAAAGAAATTGATCCAGAAGTTGAAG 93
consensus_11213#1      GTCGTAAACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAA 113
                           * ** ** **        *       **  * *** ** ***  * ** * **** 

consensus_11213#0      ---CTGCATTACGTGAGGCAGAAGAAAA-ACGAGAAGCTAAACATCGTAAAATGGAAGAA 351
consensus_11213#2      ---CTGCATTACGTGAGGCAGAAGAAAA-ACGAGAAGCTAAACATCGTAAAATGGAAGAA 149
consensus_11213#1      ACATTCTAACAAGTATGTTACCAGAAAATATGAGAAA-TATGGCTAATAAAGTAACAGAA 172
                           *  *  * **  *  *  ****** * *****  **    *  **** *   ****

consensus_11213#0      GAACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAA--------- 402
consensus_11213#2      GAACGAGAAGTAATGCGTCAAGGTATCAGAGACAAATATGGTATTAAGAAA--------- 200
consensus_11213#1      GTTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCA 232
                       *  * ** *  ***   *  **     ** ** **** *  * *** *  *         

consensus_11213#0      --AAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTC 460
consensus_11213#2      --AAAGAAGAAGAGGTTCCAGCTGATTTCGACTTCTCTAGTCCTGAAGGACGTCTTGGTC 258
consensus_11213#1      TTAAAAAAAAAAATATATTATTTACTTCTAAACAATATAAACATGTATAATCATGTCGAT 292
                         *** ** ** *  *   *  *  **   *    * **  * ** *  *     * *  

consensus_11213#0      GTAA---ACGTAAAACACCAGCTGAACTAGCGGCTGAAGCAAATGAAGCGGACGATGAAA 517
consensus_11213#2      GTAA---ACGTAAAACACCAGCTAACATACCTGGTA------------------------ 291
consensus_11213#1      ACAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCA 352
                         **   ** * ***      ** *  **                               

consensus_11213#0      ACATTCTAACAAGTATGTTACCAGAAAATATGAGAAATATGGCTAATAAAGTAACAGAAG 577
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      TCCATCCATCCATCCATCCATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTG 412
                                                                                   

consensus_11213#0      TTCCAGGAAAAATAATTTCAGAAGCTAGTGAAAAATGTCTTCTTATGTGATGATTATCAT 637
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      TTTGTCTATCTATCTACCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTA 472
                                                                                   

consensus_11213#0      TTAAAAAAAAAATATATTATTTACTTTTAAACAATATAAACATGTATAATCATGTCGATA 697
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ATCTATCTGTCTATCTATCTATCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCT 532
                                                                                   

consensus_11213#0      CAATTCACATCAAAGTAATTCTGACATAATTATAGTCAATCTATCCATCCATCCATCCAT 757
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      GTTTGTCTATCTATCTACCCACCTATTCAATCTATCTGT--------------------- 571
                                                                                   

consensus_11213#0      CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCTATCTAT 817
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      CTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTTTGTCTATCTATCTACCTAT 877
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      CTATCTGTCTGTTTGTCTATCTATCTACCTAACTATCTAATCTATCTGGCTATCTATCTA 937
consensus_11213#2      ------------------------------------------------------------
consensus_11213#1      ------------------------------------------------------------
                                                                                   

consensus_11213#0      TCTGTCTGTCTGTCTATTTATCTACCTATCTATCTGTCTGTTTGTCTATC 987
consensus_11213#2      --------------------------------------------------
consensus_11213#1      --------------------------------------------------
                                                                         




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)