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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11224#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1272 fasta sequence
[GAAGCATTAAAAGAAGAAGCTAACAAATTTTTTAAAGATGGGGACTATGAAAAAGCCATCGATGCATACACGAAGGCGATTGAAATTCGGGAAACTGCTGTCTATTTGGCCAACAGAAGCCTCGCTTATCTTCGTACAGAGTGTTTCGGTTATGCTTTGGATGATGCTTCTAAAGCTATATCTTTGGATAGTTCCTATGTGAAGGGTTATTATCGCAGGGCATCTGCACACATGGCATTAGGTCAG-ATAAGGAGGCGTTGGCTGACTACGAAACTGTTATTCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGATCAGCCATCTCCACTAGAATCTTTTGATCTATCAACAATTACTGTAGAATCTAGTTACGATGGTCCGCACTTAGAACAGGATAGTAATGGGAAATACTTTGTCACGGAGTCGTTTATGTTAGCTTTAATGGAGCATTACAAATCTCAAAAAGTATTACACAAGAAATATGCCATAATAATAATGAAAGAAATTTTCTTATATCTCCGCGACTTACCAAGTTTGGTAGACATTAAAGTCCCAGAAAAGTCTAAGTTTACTGTTTGTGGGGATATACACGGTCAGTTCTACGATCTTATGAACATATTTCAAATCAACGGGCTTCCGAGCAAAGATAATCCTTACTTGTTC-AATGGTGACTTTGTTGATCG-GGGATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT-ATATTCAACTGGTTACC-TCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA]
[+] EMBL AI975930 [GAAGCATTAAAAGAAGAAGCTAACAAATTTTTTAAAGATGGGGACTATGAAAAAGCCATCGATGCATACACGAAGGCGATTGAAATTCGGGAAACTGCTGTCTATTTGGCCAACAGAAGCCTCGCTTATCTTCGTACAGAGTGTTTCGGTTATGCTTTGGATGATGCTTCTAAAGCTATATCTTTGGATAGTTCCTATGTGAAGGGTTATTATCGCAGGGCATCTGCACACATGGCATTAGGTCAGTATAAGGAGGCGTTGGCTGACTACGAAACTGTTATTCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGATCAGCCATCTCCACTAGAATCTTTTGATCTATCAACAATTACTGTAGAATCTAGTTACGATGGTCCGCACTTAGAACAGGATAGTAATGGGAAATACTTTGTCACGGAGTCGTTTATGTTAGCTTTAATGGAGCATTACAAATCTCAAAAAGTATTACACAAGAAATATGCCATAATAATAAT ]
[+] EMBL CD067188 [ caAGGTGAG ATCAAGAGGCGTTGGCTGACTACGAGACTGTTATCCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGATCAGCCATCTCCACTAGAATCTTTTGATCTATCAACAATTACTGTAGAATCTAGTTACGATGGTCCGCACTTAGAACAGGATAGTAATGGGAAATACTTTGTCACGGAGTCGTTTATGTTAGCTTTAATGGAGCATTACAAATCTCAAAAAGTATTACACAAGAAATATGCCATAATAATAATGAAAGAAATTTTCTTATATCTCCGCGACTTACCAAGTTTGGTAGACATTAAAGTCCCAGAAAAGTCTAAGTTTACTGTTTGTGGGGATATACACGGTCAGTTCTACGATCTTATGAACATATTTCA ]
[+] EMBL CD067189 [ GGCTGACTACGAGACTGTTATCCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGATCAGCCATCTCCACTAGAATCTTTTGATCTATCAACAATTACTGTGGAATCTATGTACGATGGT ]
[+] EMBL CD067285 [ TGACTACGAAACTGTTATTCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGATCAGCCATCTCCACTAGAATCTTTTGATCTATCAACAATTACTGTAGAATCTAGTTACGATGGTCCGCACTTAGAACAGGATAGTAATGGGAAATACTTTGTCACGGAGTCGTTTATGTTAGCTTTAATGGAGCATTACAAATCTCAAAAAGTATTACACAAGAAATATGCCATAATAATAATGAAAGAAATTTTCTTATAT ]
[+] EMBL CD067020 [ TGACTACGAAACTGTTATTCGAGTTGCACCTAGTGACAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGAAAAAGCCATTGCAGTAGAAGAT ]
[-] EMBL CD165788 [ GTAGACATTAAAGTCCCAGAAAAGTCTAAGTTTACTGTTTGTGGGGATATACACGGTCAGTTCTACGATCTTATGAACATATTTCAAATCAACGGGCTTCCGAGCAAAGATAATCCTTACTTGTTC AATGGTGACTTTGTTGATCG GGGATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTACGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTG ]
[+] EMBL CD082406 [ actTAAGTTTACTGTTTGTGGGGATATACACGTTCAGTTCTACGATCTTACGAACATATTTCAAATCAACGGGCTTCCGAGCAAAGATAATCCTTACTTGTTC AATGGTGACTTTGTTGATCG GGGATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA]
[-] EMBL CD066533 [ TACGATCTTATGAACATATTTCAAATCAACGGGCTTCCGAGCAAAGATAATCCTTACTTGTTC AATGGTGACTTTGTTGATCG GGGATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCGAAATATTCTTCTAAAGTGGCCCATATGTTCCCGGATAATA TCCACTGGTTACCTTCAAGCCCTTCTAATTAATGAAAGAATTCTGGTTAGGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTG ]
[+] EMBL CD187038 [ aGCTTCCGGGCAAAGATTATCCTTACTTGTTCGACTGGTGACTTTGTTGATCGTGGGATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTATTATCTTTCCAGAGGTAATCATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTG ]
[+] EMBL CD195588 [ CCGAGCAAAGATAATCCTTACTTGTTC AATGGTGACTTTGTTGATCG GGGATCGTTTTCAGTGGAGTGTATCTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTAAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGA ]
[-] EMBL CD128478 [ GATCGTTTTCAGTGGAGTGTATTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTATGCCATCTTATTAATGAAAGAATTCTAGTTATGCATGGTGGGTTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTA ]
[-] EMBL CD128414 [ TTTTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGAT ATATTCAACTGGTTACC TCTATGCCATCTTATTAATGAAAGAATTCTAGTTATGCATGGTGGGTTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCTATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTC ATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCATAACGGTCTAGACTATATTATTAGAAGT ]
consensusID : consensus_11224#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 28 consensus length = 1141 fasta sequence
[CTCCAGGCCAAAAATTCGGCACGAGGTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGATATATTCAACTGGTTACCTCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATCCAGATGTGCGCCCAATGGCTTACGTGAATCCATTACTTTCCATGTTCATGTGATTTGTACATTGCTTTTTTCCTATTTTGTGCCTTAAACTGGTTACTGAACATTGATAGATGCATATTTTAATCAACACACATATATACAATTAACTTGACTAATGTATCAATTGTTCATTGTACACATTATATTGTCAAAGTTCTCACGTAACATTTTCTTACTCATTTTTGACTGGCTTACTTTTAAGTCAAGGATTCTCATGTTTGCATTTTTAATTCCATTGTAATAAAGTTACTTTAGGAAAATGTAAAAAAATTTATTCACATTCTTATTACTATTATTATTATTATTACTACTACTCACACTGATACCATTGTTTGAATTTGTGAAGGCTATTTTCCCATTTAGTCCAACTACCAGTTCTCATTTATTCTAGGGTTGATTTTGCAAGTATATTAGAAGAAATCATTAAGCTTCATTTATTTTATCGTCTTACTGTATCATGTTTGAATAAAAATTG]
[+] EMBL CD080193 [CTCCAGGCCAAAAATTCGGCACGAGGTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGATATATTCAACTGGTTACCTCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATCCAGATGTGCGCCCAATGGCTTACGTGAATCCATTACTTTCCATGTTCATGTGATTTGTACATTGCTTTTTTCCTATTTTGTGCCTTAAACTGGTTACTGAACATTGATAGATGCATATTTTA ]
[-] EMBL CD067153 [ TATCCAGATAAGTTTTATCTTTCCAGAGGTAATCATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATATTCTTCTGAAGTGGCCAATATGTTCACGGATATATTCAACTGGTTACCTCTATGCCATCTTATTAATGAAAGAGTTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGACGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGACCCAATGGAGGTTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTG ]
[-] EMBL CD067501 [ ATATGTTCACGGATATATTCAACTGGTTACTTCTATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGGTGAGGGTCGAGCCCATTCTAAACGTGGAGTCGGTCCTCA ]
[-] EMBL CD066434 [ gATGCCATCTTATTAATGAAAGAATTCTGGTTATGCATGGTGGATTGTTCGAACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGTTGAAGGTCGAGCCCATTCTAAAGGTGGAGTCGGAAGTC ]
[-] EMBL CD072661 [ TCGANCGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGANATCGTCANCCTGACGAAGGCACTATAATGTGTGAATNGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAGAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAA ]
[+] EMBL CD150216 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATC ]
[+] EMBL CD112145 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATC ]
[+] EMBL CD150180 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATC ]
[+] EMBL CD150131 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAATGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTATACTATATTATTATAAGTCATGAAGTGAAAGATGAGGGTTACCAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAATTACTGTGACACACTGg ]
[+] EMBL CD150192 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCGCTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAGGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112066 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112137 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAGAGATGAGGGTTACGAAGTTGCTCATAATAGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112486 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD150163 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD150165 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD150197 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD150264 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112308 [ AACGCGATAATGTCACATTAGAATAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATGATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112494 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGCCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112499 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGCCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112289 [ AACGCGATAATGTCTCATTAGAT AAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD112479 [ AACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCAT ]
[-] EMBL CD112544 [ ACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAA ]
[-] EMBL CD112462 [ ACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTAA ]
[-] EMBL CD072655 [ ACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAA ]
[+] EMBL CD150316 [ gACGCGATAATGTCACATTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAACGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTATATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCTCATAATGGTCGCTGTATTACTGTTTTCTCAGCTCCTA ]
[+] EMBL CD192219 [ ATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTCt ]
[-] EMBL CD076007 [ GTAGCGATGAACCAGGAGAAATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATCCAGATGTGCGCCCAATGGCTTACGTGAATCCATTACTTTCCATGTTCATGTGATTTGTACATTGCTTTTTTCCTATTTTGTGCCTTAAACTGGTTACTGAACATTGATAGATGCATATTTAAATCAACACACATATATACAATTAACTTGACTAATGTATCAATTGTTCATTGTACACATTATATTGTCAAAGTTCTCACGTAACATTTTCTTACTCATTTTTGACTGGCTTACTTTTAAGTCAAGGATTCTCATGTTTGCATTTTTAATTCCATTGTAATAAAGTTACTTTAGGAAAATGTAAAAAAATTTATTCACATTCTTATTACTATTATTATTATTATTACTACTACTCACACTGATACCATTGTTTGAATTTGTGAAGGCTATTTTCCCATTTAGTCCAACTACCAGTTCTCATTTATTCTAGGGTTGATTTTGCAAGTATATTAGAAGAAATCATTAAGCTTCATTTATTTTATCGTCTTACTGTATCATGTTTGAATAAAAATTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11224#0 GAAGCATTAAAAGAAGAAGCTAACAAATTTTTTAAAGATGGGGACTATGAAAAAGCCATC 60
consensus_11224#1 ------------------------------CTCCAGGCCAAAAATTCGGCACGAG----- 25
* * * * * * * **
consensus_11224#0 GATGCATACACGAAGGCGATTGAAATTCGGGAAACTGCTGTCTATTTGGCCAACAGAAGC 120
consensus_11224#1 GTTGTTCGGGTTTAAGCT-TCTTTATCCAGATAAGTTTTATCTTT----CCAGAGGTAAT 80
* ** * ** * ** * * ** * * *** * *** * *
consensus_11224#0 CTCGCTTATCTTCGTACAGAGTGTTTCGGTTATGCTTTGGATGATGCTTC-TAAAGCTAT 179
consensus_11224#1 CATGAATCCGAACACATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATAT 140
* * * * * * * * * * * *** * * ** ***
consensus_11224#0 ATCTTTGGA-TAGTTCCTATGTGAAGGGTTATTATCGCAGGGCATCTGCACACATGGCAT 238
consensus_11224#1 TCTTCTGAAGTGGCCAATATGTTCACGGATATATTCAACTGG---TTACCTCTATGCCAT 197
* ** * * * ***** * ** *** ** ** * * *** ***
consensus_11224#0 TAGGTCAGATAAGGAGGCGTTGGCTGACTACGAAACTGTTATTCGAGTTGCACCTAGTGA 298
consensus_11224#1 CTTATTA-ATGAAAGAATTCTGGTTATGCATGGTGG-ATTGTTCGAACGCGA--TAATGT 253
* * ** * *** * * * ** ***** * ** **
consensus_11224#0 CAAAATGGCTCGTGAGAAGTTGACTGAATGCCGGAAAATAATTCGTCGCAAAGCATTTGA 358
consensus_11224#1 CACATTAGAT-----GAAATAAAAAAAGTGTCTCGAAAT----CGTCA------ACCTGA 298
** * * * * *** * * * ** * **** **** * ***
consensus_11224#0 AAAAGCCATTGCAGTAGAAGATCAGCCATC-TCCACTAGAATCTTTTGATCTATCAACAA 417
consensus_11224#1 CGAAGGCACTATAATGTGTGAATTGCTGTGGTCTGATCCAATGGA--GGCTGAAGGTCGA 356
*** ** * * * ** ** * ** * *** * * * *
consensus_11224#0 TTACTGTAGAATCTAGTTACGATGGTCCGCACTTAGAACAGGATAGTAATGGGAAATACT 477
consensus_11224#1 GCCCATTCTAAAC--GTGGAGTCGGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCT 414
* * ** * ** * *** ** ** * * *** * ** ** * **
consensus_11224#0 TTGTCACGGAGTCGTTTATGTTAGCTTTAATGGAGCATTACAAATCTCAAAAAGTATTAC 537
consensus_11224#1 GTAA-GCAAAACGGTCTAGACTA-TATTATTAGAA-GTCATGAAGT--GAAAGATGAGGG 469
* * * ** ** ** *** * ** * * ** *** *
consensus_11224#0 ACAAGAAATATGCCATAATAATAATGAAAGAAATTTTCTTATATCTCCGCGACTTACCAA 597
consensus_11224#1 TTACGAAGTTGCTCATAATGGTCGCTGTA-----TTACTGTTTTCTCAGCTCCTAATTA- 523
* *** * ****** * * ** ** * **** ** ** * *
consensus_11224#0 GTTTGGTAGACATTAAAGTCCCAGAAAAGTCTAAGTTTACTGTTTG-TGGGGATATACAC 656
consensus_11224#1 --CTGTGACACAATGCACAATCGAGGAGCTTTTATTACATTGATAGGTAGCGATGAACCA 581
** * *** * * * * * * * * * ** * * * * *** **
consensus_11224#0 GGTCAGTTCTACGATCTTATGAACATATTTCAAATCAACGG--GCTTCCGAGCAAAGATA 714
consensus_11224#1 GGAGAA-------ATGTCTCCAATGTTTACCAGCTTTACGGCAGTACCTCATCCAGATGT 634
** * ** * ** * * ** * **** * * * * *
consensus_11224#0 ATCCTTACTTGTTCAATGGTGACTTTGTTGATCGGGGATCGTTTTCA-GTGGAGTGTATT 773
consensus_11224#1 GCGCCCAATGGCTTAC--GTGAATCCATTACTTT----CCATGTTCATGTGATTTGTACA 688
* * * * * * **** * ** * * * **** *** ****
consensus_11224#0 TTCACTTTGTTCGGGTTTAAGCTTCTTTATCCAGATAAGTTTTATCTTTCCAGAGGTAAT 833
consensus_11224#1 TTGCTTTTTTCCTATTTTGTGC--CTTAAACTGGTTA--CTGAACATTGATAGATGCATA 744
** *** * * *** ** *** * * * ** * * ** *** * *
consensus_11224#0 CATGAATCCGAACATATGAACAGACTTTATGGCTTTGAAGGTGAGGTAAAGTCAAAATAT 893
consensus_11224#1 TTTTAATCAACACACATATATACAATT---AACTTGACTAATGTATCAATTGTTCATTGT 801
* **** *** ** * * * ** *** ** ** * * *
consensus_11224#0 TCTTCTGAAGTGGCCAATATGTTCACGGATATATTCAACTGGTTACCTCTA--TGCCATC 951
consensus_11224#1 ACACATTATATTGTCAAAGTTCTCACGTA-ACATTTTCTTACTCATTTTTGACTGGCTTA 860
* * * * * *** * ***** * * *** * * * * * ** * *
consensus_11224#0 TTATTAATGAAAGAATTCTGGT-TATGCATGGTGGATTGTTCGAACGCGATAATGTCACA 1010
consensus_11224#1 CTTTTAAGTCAAGGATTCTCATGTTTGCATTTTTAATT---CCATTGTAATAAAGTTACT 917
* **** *** ***** * * ***** * *** * * * **** ** **
consensus_11224#0 TTAGATGAAATAAAAAAAGTGTCTCGAAATCGTCAACCTGACGAAGGCACTATAATGTGT 1070
consensus_11224#1 TTAGGAAAATGTAAAAAAATTTATTCACATTCTTATTACTAT-----TATTATTATT--- 969
**** ** ****** * * * * ** * * * * *** **
consensus_11224#0 GAATTGCTGTGGTCTGATCCAATGGAGGCTGAAGGTCGAGCCCATTCTAAACGTGGAGTC 1130
consensus_11224#1 --ATTACTA----CTACTCACACTGATACCATTGTTTGAAT---TTGTGAA-----GGCT 1015
*** ** ** ** * ** * * * ** ** * ** *
consensus_11224#0 GGTTGTCAATTTGGTCCTGATGTCACTGAAAAGTTCTGTAAGCAAAACGGTCTAGACTAT 1190
consensus_11224#1 ATTTTCCCATTTAGTCCAACTACCAGTTCTCATTTATTCTAGGGTTGATTTTGCAAGTAT 1075
** * **** **** * ** * * ** * ** * * ***
consensus_11224#0 ATTATTAGAAGTCATGAAGTGAAAGATGAGGGTTACGAAGTTGCT-CATAATGGTCGCTG 1249
consensus_11224#1 ATTAGAAGAAATCATTAAGCTTCATTTATT--TTATCGTCTTACTGTATCATGTTTGAAT 1133
**** **** **** *** * * *** ** ** ** *** * *
consensus_11224#0 TATTACTGTTTTCTCAGCTCCTA 1272
consensus_11224#1 AAAAATTG--------------- 1141
* * **
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||