Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 11226 cluster # 11226       Sequences # 40       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11226#0 length = 1271 sequences # 24  
consensus_11226#1 length = 838 sequences # 11  
consensus_11226#2 length = 586 sequences # 4  
consensus_11226#3 length = 271 sequences # 1  

consensusID : consensus_11226#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 24
consensus length = 1271
fasta sequence
                              [CTCCGAGCCAAGATTCGGCACGAGGTGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAGATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT-AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT-AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTA-TTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAGTTCTTATGTAAAAAAAAAAAAAAAA]

[+] EMBL CD083112             [CTCCGAGCCAAGATTCGGCACGAGGTGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAGATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD081217             [                                                                     gaggGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTC ATATTAACTTATGGTAATGCTTATAAAATAC ATGTTGCGATTCATCATAAGATCCATATTTTCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD077692             [                                                                         GGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGNGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL SM35432              [                                                                                AAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATTTCTGGAACGTGCTGTAGTACAGGATAGTCCTTCAAGCGATTAct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AW017352             [                                                                                       ACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATTTCTGGAACGTGCTGTAGTACAGGATAGTCCTTTCAGCGATTACTTTCCTTACCGTTTTCCTTTCAATATTAACTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI976120             [                                                                                           CGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTGCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD126241             [                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGCTGA TGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTA                                                                                                                                                                                                                                                                                               ]
[+] EMBL AI976964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           GACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTTCGTTGTGATGAA                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD076686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATT                                                                                                                                                                                                                                                               ]
[-] EMBL CD126214             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTC TATGTCTGACTTTTTGTCTTCATAAAACCATTAATTCATGTCTGTCTGCTTCGAG CCATGATTATTTA T                                                                                                                                                                                ]
[-] EMBL CD126248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTAT TTTGTct                                                                                                                                                                          ]
[-] EMBL CD076959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTACCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAGGGATATT                                                                                                                                                                                                                                                               ]
[-] EMBL BG930770             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aGACCCTCCAAATTCCATTTCTGGAACATGCTGTAGTACAGAATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCCAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTA                                                                                                                                                                                                                                                                       ]
[-] EMBL CD075048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAAA                                                       ]
[-] EMBL CD075688             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTATAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAA                                                        ]
[-] EMBL CD194293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATCCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACC                                                                                                   ]
[-] EMBL AI977181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTAACTTATGGTAATGCTTAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAG                         ]
[-] EMBL AI395788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         agtactTTATGTAAATGCTTAT AAATACAGTGTTGCGATTCATCATAAGATCCATATTTTCGCCGGCCAAAAGACAGTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTNTGTGTAGGGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAGTTCTTATGTAAAAAAAAAAAAAAAA]
[-] EMBL CD158275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAT AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAAT                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BG931354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTT AATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATCTACTTTTTAAATGTA                                                                                                                                                                                                                                                                       ]
[+] EMBL CD126203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGTAATTTTGGTTTAAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCC                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BG930270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGCGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGT                                                                                                                                                                                                                                                                        ]
[-] EMBL AI395063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTGGA CTACAATTTCACGTTCGGTTGTGATG AACACTTGCGCTAGCGTTGAAA TCCTTGTTATACCACACTAAAT TTTTTCCACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGATGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAGTTCTTATGTAAAAAAAAAAAAAAAA]
[-] EMBL BG930201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAGCCCATGATTATTTATTTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTATTTACTGAt                                                                                                                          ]


>consensus_11226#0 CTCCGAGCCAAGATTCGGCACGAGGTGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAG ATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAG ATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAA CCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGA AAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCT CTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGT TTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGA AGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGG GTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAA CGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATAC GTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCA TCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTT CCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGAT CCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGGTTTA ATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTTGTGA TGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTT CACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGA ATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTTCGAG CCCATGATTATTTATTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCTTTTA TTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATGTTGA TGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAGTTCTTATGTAAAAA AAAAAAAAAAA



consensusID : consensus_11226#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 838
fasta sequence
                              [AATTCCAGTGATCATCGACGATGGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGA-AGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC-TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCT-GTCGTAATTTTGGTTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD178266             [AATTCCAGTGATCATCGACGATGGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGA AGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAGGACATTCAGAGTTTTA                                                                                                                                                                                                                                     ]
[+] EMBL CD126231             [                                                                                                                                                                                                        AATGAGGTTGAGACAGTTGCTGA TGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAGTATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACCGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGAATCATCATAAGATCCATATTTTCGGCCGg                                                                                                                                                                                                                                                          ]
[+] EMBL CD112666             [                                                                                                                                                                                                            AGGTTGAGA AGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD112038             [                                                                                                                                                                                                                  gac AGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGT                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BG930539             [                                                                                                                                                                                                                                                                                  GTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGGAATGCTTATAAATACAATGTTGCGATTCA                                                                                                                                                                                                                                                                                   ]
[+] EMBL BG931520             [                                                                                                                                                                                                                                                                                  cTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCT GTC                                                                                                                                                                                                                           ]
[+] EMBL BG930990             [                                                                                                                                                                                                                                                                                  aTCGGCAAAAATCAGATGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAATGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTC TGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCGTTTGCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTGCT GTCGTAATATTGGTTTAATCTTAGTGTAGAGG                                                                                                                                                                                              ]
[-] EMBL AI395462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           nCCAAATTCCATTTCTTGGAACGTGCTGTAGTACAGGATAGTCCTTCAAGCGATTACTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCT GTCGTAATTTTGGTTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTAAAAAAAAAAAAAAAAAAA]
[+] EMBL CD145295             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTCTTAGTTTCT GTCGTAATTTTGGATTAATCTTTGCGTAAAGGTGCTTCTGTCATACTCTGGACCTACGATCTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTT                                                                                           ]
[-] EMBL CD139178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTCGTCGTAATTTTGGTTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAA                                                                                                   ]
[-] EMBL CD139171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCT GTCGTAATTTTGGTTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAA                                                                                                   ]


>consensus_11226#1 AATTCCAGTGATCATCGACGATGGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTG CAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAA TGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATA GAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACA TGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGA TTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAAC TGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTC AAGTCCACCGGTTAGCCGAACCTCCAAATTCCATCTCTGGAACATGCTGTAGTACAGGAT AGTCCTTCAAGCGATTATTTTCCTCACCGTTTTCCTTTCAATATTAACTTATGGTAATGC TTATAAATACAATGTTGCGATTCATCATAAGATCCATATTTTCGGCCGCCAAAAGACATT CAGAGTTTTAGTTTCTGTCGTAATTTTGGTTTAATCTTTGTGTAGAGGTGCTTCTGTCAT ACTCTGGACCTACGATTTCACGTTCGGTTGTGATGAAACACTTGCGCTAGCGTTGAAATT CCTTGTTATACCACACTAAATGTTTTTCCACTTCATATAAAGCCTACAAAGCCAATTAGT CACCATTTACTTTTTAAATGTAAATATATTTGAATTCTTAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11226#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 586
fasta sequence
                              [TAACTGCTCGAGGGACCAAAAAAGTCTTACGACGCACTGTTTAAAATTTTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCG]

[+] EMBL CD082073             [TAACTGCTCGAGGGACCAAAAAAGTCTTACGACGCACTGTTTAAAATTTTGCTCATTGGAGATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCG]
[+] EMBL CD195716             [                                                                                                                                                                      AGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCTCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAA                                                                                                                                                                                                                                                               ]
[+] EMBL CD139457             [                                                                                                                                                                                                                                                                              TTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTC                             ]
[+] EMBL CD063051             [                                                                                                                                                                                                                                                                                                                                                                           TTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTgggt ]


>consensus_11226#2 TAACTGCTCGAGGGACCAAAAAAGTCTTACGACGCACTGTTTAAAATTTTGCTCATTGGA GATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCA ACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAG AAAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCC TCTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACG TTTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAG AAGTTGCTGATTGCTAATAAGTGTGACATGGCGCATAACCGAGTTGTATCTTATGAAGAG GGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCGTCA ACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCTATA CGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCG



consensusID : consensus_11226#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 271
fasta sequence
                              [TGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAGATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGCTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGGTAAGCAGCATCTTAGGGATACCGATTGAATGAAGATATGGG]

[+] EMBL CD188829             [TGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAGATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGCTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGGTAAGCAGCATCTTAGGGATACCGATTGAATGAAGATATGGG]


>consensus_11226#3 TGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAGATCTTACTAATATGGCAAAAAAGTC TTACGACGCACTGTTTAAAATTCTGCTCATTGGAGATTCTGGTGCTGGCAAAACTTGCCT ACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAACCTTCATTTCAACGATAGGAATCGA TTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGGTAAGCAGCAT CTTAGGGATACCGATTGAATGAAGATATGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      CTCCGAGCCAAGATTCGGCACGAGGTGAACATTGGAAGCGGTGTTTTCAACCTTGCTGAG 60
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      ATCTTACTAATATGGCAAAAAAGTCTTACGACGCACTGTTTAAAATTCTGCTCATTGGAG 120
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      ATTCTGGTGTTGGCAAAACTTGCCTACTCGTTCGTTATGTAGAAGAGTCTTTTGTACCAA 180
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      -----------------------------------------TGAACATTGGAAGCGGTGT 19
consensus_11226#0      CCTTCATTTCAACGATAGGAATCGATTTTAAGATTAAAACAATTGAGTTAGAAGGAAAGA 240
consensus_11226#1      -----------------------AATTCCAGTG----ATCATCGACGATGGAAGGAAAGA 33
                                                                                   

consensus_11226#2      ---------------TAACTGCT-CGAGGGACCAAAAAAGTCTT---ACGACGCACTGTT 41
consensus_11226#3      TTTCAACCTTGCTGAGATCTTAC-TAATATGGCAAAAAAGTCTT---ACGACGCACTGTT 75
consensus_11226#0      AAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCT 300
consensus_11226#1      AAATAAAGCTACAGATATGGGATACTGCAGGCCAGGAACGCTTTCATACAATTACCTCCT 93
                                       *               **  ** *  **   ** *    **  *

consensus_11226#2      TAAAATTTTGCTCATTGGAGATTCTGGTGTTGGCAAA--ACTTGCCTACTCGTTCGTTAT 99
consensus_11226#3      TAAAATTCTGCTCATTGGAGATTCTGGTGCTGGCAAA--ACTTGCCTACTCGTTCGTTAT 133
consensus_11226#0      CTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGT 360
consensus_11226#1      CTTACTATCGCGGTGCCATGGGTATAATGTTGATATACGATATTACTAGTCGTCAAACGT 153
                          * *   **        *  * *  ** **  * *  *  *  *** ****      *

consensus_11226#2      GTAGAAGAGTCT---TTTGTACCAACCT--TCATTTCAACGATAGGAATCGATTTTAAGA 154
consensus_11226#3      GTAGAAGAGTCT---TTTGTACCAACCT--TCATTTCAACGATAGGAATCGATTTTAAGA 188
consensus_11226#0      TTGATAACGTCCAGACGTGGATGAATAGGACCTTTTCTTTGGCATCAAATGAGGTTGAGA 420
consensus_11226#1      TTGATAACGTCCAGACGTGGATGAATAGAACCTTTTCTTTGGCATCAAATGAGGTTGAGA 213
                        *   *  ***      ** *  **      * ****   *  *  **  **  ** ***

consensus_11226#2      TTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGATATGGGATACTGCAGGCC 214
consensus_11226#3      TTAAAACAATTGAGTTAGAAGGAAAGAAAATAAAGCTACAGGTAAGCAGCATCTTAGG-- 246
consensus_11226#0      AGTTGCTGATTG--CTAATAAGTGTGACA-TGGCGC-ATAACCGAGTTGTATCTTATGAA 476
consensus_11226#1      AGTTGCTGATTG--CTAATAAGTGTGACA-TGGCGC-ATAACCGAGTTGTATCTTATGAA 269
                               ****   **  * *   ** * *   ** * *     *    *    * *  

consensus_11226#2      AGGA-ACGCTTTCATACAAT----TACCTCCTCTTACTATCGCGGTGCCATGGGTATAAT 269
consensus_11226#3      GATA-CCGATTGAATGAAGA----TATGGG------------------------------ 271
consensus_11226#0      GAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCG 536
consensus_11226#1      GAGGGTCGGCAAAAAGCAGAGGAATATGGGATTGGTTTCCTGGAAACAAGTGCAAAGTCG 329
                             **     *   *      **                                  

consensus_11226#2      GTTGATATACGATATTACTAGTCGTCAAACGTTTGATAACGTCCAGACGTGGATGAATAG 329
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCT 596
consensus_11226#1      TCAACGAATGTACACAAGGCCTTCGAGGAACTGACTCGCGCCATCCTCCATAACAGTTCT 389
                                                                                   

consensus_11226#2      AACCTTTTCTTTGGCATCAAATGAGGTTGAGAAGTTGCTGATTGCTAATAAGTGTGACAT 389
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      ATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAAT 656
consensus_11226#1      ATACGTAGACATGAGTCGTCTACGGTGACTCAAGTCCACCGGTTAGCCGAACCTCCAAAT 449
                                                                                   

consensus_11226#2      GGCGCATAACCGAGTTGTATCTTATGAAGAGGGTCGGCAAAAAGCAGAGGAATATGGGAT 449
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCG 716
consensus_11226#1      TCCATCTCTGGAACATGCTGTAGTACAGGATAGTCCTTCAAGCGATTATTTTCCTCACCG 509
                                                                                   

consensus_11226#2      TGGTTTCCTGGAAACAAGTGCAAAGTCGTCAACGAATGTACACAAGGCCTTCGAGGAACT 509
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATA 776
consensus_11226#1      TTTTCCTTTCAATATTAACTTATGGTAATGCTTATAAATACAATGTTGCGATTCATCATA 569
                                                                                   

consensus_11226#2      GACTCGCGCCATCCTCCATAACAGTTCTATACGTAGACATGAGTCGTCTACGGTGACTCA 569
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      AGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGG 836
consensus_11226#1      AGATCCATATTTTCGGCCGCCAAAAGACATTCAGAGTTTTAGTTTCTGTCGTAATTTTGG 629
                                                                                   

consensus_11226#2      AGTCCACCGGTTAGCCG------------------------------------------- 586
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACAATTTCACGTTCGGTT 896
consensus_11226#1      TTTAATCTTTGTGTAGAGGTGCTTCTGTCATACTCTGGACCTACGATTTCACGTTCGGTT 689
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      GTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCC 956
consensus_11226#1      GTGATGAAACACTTGCGCTAGCGTTGAAATTCCTTGTTATACCACACTAAATGTTTTTCC 749
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      ACTTCACATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATAT 1016
consensus_11226#1      ACTTCATATAAAGCCTACAAAGCCAATTAGTCACCATTTACTTTTTAAATGTAAATATAT 809
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TTGAATTCTTATGTCTGACTTTTTGTCTTCATAAAACCATTTATTCATGTCTGTCTGCTT 1076
consensus_11226#1      TTGAATTCTTAAAAAAAAA-------AAAAAAAAAA------------------------ 838
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      CGAGCCCATGATTATTTATTTGTTTCATTTTGTGCTTCTTGGAATTGTACTAAGATTGCT 1136
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TTTATTTACTGACTTTCCCGTCCATCATTCCCTACCTTCATAATCCACGTGGTGTATATG 1196
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ------------------------------------------------------------
consensus_11226#3      ------------------------------------------------------------
consensus_11226#0      TTGATGTTTGGGGTTGTAAAAGTAATATGAAAAGAATAATTAAAGCCAAGTTCTTATGTA 1256
consensus_11226#1      ------------------------------------------------------------
                                                                                   

consensus_11226#2      ---------------
consensus_11226#3      ---------------
consensus_11226#0      AAAAAAAAAAAAAAA 1271
consensus_11226#1      ---------------
                                      




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)