Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 11229 cluster # 11229       Sequences # 40       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11229#0 length = 1483 sequences # 30  
consensus_11229#1 length = 703 sequences # 5  
consensus_11229#2 length = 545 sequences # 5  

consensusID : consensus_11229#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 30
consensus length = 1483
fasta sequence
                              [TGTTGGTGGATCGTCTACCACTTTATTTTGATAGCAAACAAAAACCCGAATGCATCGAAAGAAGACGTTCAAAAGGTGTTAGATGCTAAGTGGAAAGAATTCGCCATAATGAATCCTTATATCCCAAAAGGAGAGGAAGACTTAGACGATGATTTCGACGATGTTGACACGGAAACCCAGGAGGATGGAGTTTCTGACATCCGTATTCACAATATGTCATTCAAAAAACGTAAAGGTGCTGTGGGGAAGCACATGGTT-AAATATCTTCGGCCGGGTATGCAACTCCACTTTC-TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC-GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC-C-CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA-TTTCCCCT-GGTTGTTGCACGCACTTTTAC-GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGTGTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA-CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC-TAAATCAGATAACAACCCAGTCATCTCAGTACC-AATAGACTCGGATAAAGCCGCTGTTAAATT-TTTAGCGGATAATGAATCAAAACCTGTTATAGAAGAATAGT-ACTCTTNTAATACANAACCACAGCATATTNTCATTTTAACCACTTTCACGTAGACGTCCCACAAGAAAAATTT]

[+] EMBL CD111334             [TGTTGGTGGATCGTCTACCACTTTATTTTGATAGCAAACAAAAACCCGAATGCATCGAAAGAAGACGTTCAAAAGGTGTTAGATGCTAAGTGGAAAGAATTCGCCATAATGAATCCTTATATCCCAAAAGGAGAGGAAGACTTAGACGATGATTTCGACGATGTTGACACGGAAACCCAGGAGGATGGAGTTTCTGACATCCGTATTCACAATATGTCATTCAAAAAACGTAAAGGTGCTGTGGGGAAGCACATGGTTCAAATATCTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD129925             [                                                                                                                                                                                                                                                             TGGTT AAATATCTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169386             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGACTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD169808             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169598             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGGGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGGGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169411             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169496             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC AAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169851             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCGAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD169447             [                                                                                                                                                                                                                                                                         CTTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAGGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD068552             [                                                                                                                                                                                                                                                                          TTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAGAAAGATCAAGCGTGATCTCTAAAGGAACTGAGGACCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTACTGAAAATCGcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD068675             [                                                                                                                                                                                                                                                                          TTCGGCCGGGTATGCAACTCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAAC AGGA GTGAAATAATGCTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD068587             [                                                                                                                                                                                                                                                                          TTCGGCCGGGTATGCAACTCCACTTTCTTACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGACTTCaggctttt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD068631             [                                                                                                                                                                                                                                                                             gcgCGGGT TGCGA TCCACTTTC TACTGGAGCGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGCGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD113975             [                                                                                                                                                                                                                                                                                                                                         CTCCCCCTTCACCTGCTCATGTACCAGCTGCAACACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTC GT ATTTTTTTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTCGGTGTGTTTTGATCCCGAGTTACAAGAACCTCCAGAATGAACTTGGCCTTGTCCCCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD170456             [                                                                                                                                                                                                                                                                                                                                                                                                        AAAAGAAAAAGCGTGGTC GTAAAAAAATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD168852             [                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTGAGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAAAGGCACGCTGTG CCAAA TAGTAGANTCGAAGTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGATTTTCCCCTAGGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD068605             [                                                                                                                                                                                                                                                                                                                                                                                                                                     TGAGGAACACTCTGTGGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAGAGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTCCTACTGCTGGTGGGAATGGC C CTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTAAAGTAAACCATACTCACCAGAAGACAACTGCTCGA TTTCCCCT GGTTGTTGCACGCACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD066743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGCTCGA TTTCCCCT GGATGTTGCACGCACTTTTAC TAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCACGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGTGTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAAGAAGGTATCACATCAGTTTCTAGAGGACATAAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD067230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGCTCGA TTTCCCCT GGTTGTTGCACGTACTTTTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGTGTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAAGATGGAAAAATAGTATCCGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD202344             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTAC GAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTTGTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGTGTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTANAATTACCGATGAACTTGTCCA                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD195101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAA                                                                                                                                                                                                                             ]
[+] EMBL CD195325             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAACCCTCCTAAAATTACCGATGAACTTGTCCATACACAC                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD194949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGGAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC TAAATCAGATAACAACCCAGTCATCTCAGTACC AATAGACTCNGATAAAGCCGCTGTTAAATT CTTAGCGGATAATGAATCANAACCTGTTATAGAAGAATAGT ACTCTTNTAATACANAACCACAGCATATTNTCATTTTAACCACTTTCACGTAGACGTCCCACAAGAAAAATTT]
[+] EMBL CD195165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC TAAATCAGATAACAACCCAGTCATCTCAGTACCAAATAGACTC GATAAAGCCGCTGTTTAATT TTTAGCGGATAATGAATCAAAACCTGTTATAGAAG ATAGTAACTCTTTTAATACAANACCACAGCATATT TCATT                                      ]
[+] EMBL CD195372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC TAAATCAGAATACAACCCAGTCATCTCATTACC ANTAGACTCGGATTAAGCCGCTGTTAAATT TTTAGCGGATAATGAATCCAAACCTGGTATt                                                                                    ]
[+] EMBL CD195353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAGCCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGACGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTCTTAATTCAGAT ACAACCCAGTCATCTCAGTACC AATAGACTTCGATAAAGCCGCTGTTAAATTCTTCAACGGTTATTGAATCACACCCTGTTtt                                                                                     ]
[+] EMBL CD194849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC TANATCAGATAACAACCCAGTCATCTCAGTACC AATAGACTCGGATAAAGCCGC                                                                                                                             ]
[+] EMBL CD195096             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGGAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTNCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTG                                                                                                                                                                                                                          ]
[+] EMBL CD195284             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCCAGAAGGAAGTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATGCCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC                                                                                                                                                                                     ]
[+] EMBL CD066700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTATCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAA CCTCCTAAAATTACCGATGAACTTGTCCATACACACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTG                                                                                                                                                                                                                                                  ]


>consensus_11229#0 TGTTGGTGGATCGTCTACCACTTTATTTTGATAGCAAACAAAAACCCGAATGCATCGAAA GAAGACGTTCAAAAGGTGTTAGATGCTAAGTGGAAAGAATTCGCCATAATGAATCCTTAT ATCCCAAAAGGAGAGGAAGACTTAGACGATGATTTCGACGATGTTGACACGGAAACCCAG GAGGATGGAGTTTCTGACATCCGTATTCACAATATGTCATTCAAAAAACGTAAAGGTGCT GTGGGGAAGCACATGGTTAAATATCTTCGGCCGGGTATGCAACTCCACTTTCTACTGGAG CGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAA CACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTCGTAAAAAAATTG AGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAG AGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTC CTACTGCTGGTGGGAATGGCCCTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTA AAGTAAACCATACTCACCAGAAGACAACTGCTCGATTTCCCCTGGTTGTTGCACGCACTT TTACGAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTT GTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGT GTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGA AGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAAC CAGCTGTAACATCTGACAAGGATGGAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTG AAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTT GTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTC CTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTA GAATACTTACATGGAGATGGTTTGAACCTCCTAAAATTACCGATGAACTTGTCCATACAC ACTATCATCAGCGTTCACAAGAACAGGTCCATGAAGTAAAAAGTGAGGAAACGTTAAATG CCGAAATTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTCTAAATCAGATAACA ACCCAGTCATCTCAGTACCAATAGACTCGGATAAAGCCGCTGTTAAATTTTTAGCGGATA ATGAATCAAAACCTGTTATAGAAGAATAGTACTCTTNTAATACANAACCACAGCATATTN TCATTTTAACCACTTTCACGTAGACGTCCCACAAGAAAAATTT



consensusID : consensus_11229#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 703
fasta sequence
                              [GGATAATGAATCAAAACCTGTTATAGAAGATAGTAACTCTTTAAATACAAAACCACAGCATATTTCAATTAAACCACTTCACGTAAGATGTCCCACAAGAGAATTTTTTGTCAAGTACTCAGATTTGTCATACTGGCACTCTGAATGGCTCACTGAACTACAGCTAGATGTTCACCACCCAATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATGGGGTGTTAGACCGGAATGGTTACAACCGCAAAGGATCATCGACCATAGAACTGGTAGAGGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACCATATGATGAATGCACATGGGAAGCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGAATATCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGGTTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGAGCTGGCTGCTGAAAATTTAAGTCCTGAATTACTCCGTAAACTACCACCAGATAAATGTTTGACAGATTTAAAGAAACAATACACTTCGTCACCAAGCTTTCTT]

[-] EMBL CD145427             [GGATAATGAATCAAAACCTGTTATAGAAGATAGTAACTCTTTAAATACAAAACCACAGCATATTTCAATTAAACCACTTCACGTAAGATGTCCCACAAGAGAATTTTTTGTCAAGTACTCAGATTTGTCATACTGGCACTCTGAATGGCTCACTGAACTACAGCTAGATGTTCACCACCCAATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATGGGGTGTTAGACCG                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD067124             [                                                                                                                                                                                                                   GATACGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATGGGGTGTTAGACCGGAATGGTTACAACCGCAAAGGATCATCGACCATAGAACTGGTAGAGGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACCATATGATGAATGCACATGGGAAGCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGAATATCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGGTTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGAGCTGGCTGCTGA                                                                                           ]
[-] EMBL CD066590             [                                                                                                                                                                                                                                                                GGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATGGGGTGTTAGACCGGAATGGTTACAACCGCAAAGGATCATCGACCATAGAACTGGTAGAGGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACCATATGATGAATGCACATGGGAAGCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGAATATCGTACAATGCGT AGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGGTTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGAGCTGGCTGCTGA                                                                                           ]
[-] EMBL CD199263             [                                                                                                                                                                                                                                                                       CTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATGGGGTGTTAGACCGGAATGGTANCAACCGCAAGGGATCATCGACCATAGAACTGGTAGAGGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACCATATGATGAATGCACATGGGAAGCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGAATATCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGGTTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGAGCTGGCTGCTGAAAATTTAAG                                                                                  ]
[+] EMBL CD112023             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGTTGATATGGATAAATTCATTGAAGAATATCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGGTTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGAGCTGGCTGCTGAAAATTTAAGTCCTGAATTACTCCGTAAACTACCACCAGATAAATGTTTGACAGATTTAAAGAAACAATACACTTCGTCACCAAGCTTTCTT]


>consensus_11229#1 GGATAATGAATCAAAACCTGTTATAGAAGATAGTAACTCTTTAAATACAAAACCACAGCA TATTTCAATTAAACCACTTCACGTAAGATGTCCCACAAGAGAATTTTTTGTCAAGTACTC AGATTTGTCATACTGGCACTCTGAATGGCTCACTGAACTACAGCTAGATGTTCACCACCC AATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGA TGGGAGCACCTATAGGGGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGA ACGCTTCTATAAATGGGGTGTTAGACCGGAATGGTTACAACCGCAAAGGATCATCGACCA TAGAACTGGTAGAGGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACCATATGA TGAATGCACATGGGAAGCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGA ATATCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGG TTCATTGTCGGTTGTCAGTTTGTGCAAAAGACATAAACCTGGTCGCCGTTCTTCAAAAGA GCTGGCTGCTGAAAATTTAAGTCCTGAATTACTCCGTAAACTACCACCAGATAAATGTTT GACAGATTTAAAGAAACAATACACTTCGTCACCAAGCTTTCTT



consensusID : consensus_11229#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 545
fasta sequence
                              [CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCT-GTAACA--TCTG-ACAA-GGAT-GG-AAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAACCTCCTAAAATTACCGATGAACTTGTCAAGTACTCAGATTTGTCATACTGGCACTCTGAATGGCTCACTGAACTACAGTTAGATGTTCACCACCCAATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCGT]

[+] EMBL CD194985             [CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCT GTAACA  TCTG ACAA GGAT GG AAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTGAACCTCCTAAAATTACCGATGAACTTGTCAAGTACTCAGATTTGTCATACTGGCACTCTGAATGGCTCACTGAACTACAGTTAGATGTTCACCACCCAATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCGT]
[+] EMBL CD195375             [CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCT GTAACA  TCTG ACAA GGAT GG AAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACCACATAGCTTGTTTAATTCCACCTTTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCAC                                                                                                                                                                                                                                                     ]
[+] EMBL CD168265             [                                                                                            aacCCAGCTGGTAACATTTCTG ACAAGGGATGGG AAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD168246             [                                                                                                     gtTAACAN TCTGCACAAGGGAT GGAAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGT                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD170017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGAACTATAGTCCGATGTTCACCACCCAATCATGCTGCGAAATTATTTCAAGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAGCTCG ]


>consensus_11229#2 CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGAAGGAAGGTATCACATCAGTTTCTA AAGGAAATAAGGAGTGTGAAGATAGTGGATCTGAACCAGCTGTAACATCTGACAAGGATG GAAAAATAGTATCTGCTGTTCACCCAACCTCTCCTGAAAAAGATGAACATCAAGAATTTT GTACGGAATGTAGAGATGGTGGTGATCTTATTTGTTGTGATAACTGTCCAGCTAGTTACC ACATAGCTTGTTTAATTCCACCTCTGGCTAATATTCCTGAAGGAGTTTGGTTGTGTCCAC GTTGTGGCTGTAAACCACTAAAAGCCAAGGTGTGTAGAATACTTACATGGAGATGGTTTG AACCTCCTAAAATTACCGATGAACTTGTCAAGTACTCAGATTTGTCATACTGGCACTCTG AATGGCTCACTGAACTACAGTTAGATGTTCACCACCCAATCATGCTGCGAAATTATTTCA AGAAAAATGATATGGAAGAGCCTCCACTTCCTGAAGATGGGAGCACCTATAGGGGTCGAG CTCGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11229#0      TGTTGGTGGATCGTCTACCACTTTATTTTGATAGCAAACAAAAACCCGAATGCATCGAAA 60
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      GAAGACGTTCAAAAGGTGTTAGATGCTAAGTGGAAAGAATTCGCCATAATGAATCCTTAT 120
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      ATCCCAAAAGGAGAGGAAGACTTAGACGATGATTTCGACGATGTTGACACGGAAACCCAG 180
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      GAGGATGGAGTTTCTGACATCCGTATTCACAATATGTCATTCAAAAAACGTAAAGGTGCT 240
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      GTGGGGAAGCACATGGTTAAATATCTTCGGCCGGGTATGCAACTCCACTTTCTACTGGAG 300
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      CGGGCAGTGAGGCTCCAAGTCAGTCCCCTCCCCCTTCACCTGCTCATGTACCAGCTGCAA 360
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      CACCGCCTTTGAAGATTCGAATAAGCAAGAAAAAGAAAAAGCGTGGTCGTAAAAAAATTG 420
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      AGGAGCAGTCTGTTGGAGGCCATAACACAAGTGATGAAGAATTCGAACGACAGTTAGAAG 480
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      AGGCCGAATTAGCTCAAGATGAAGAACGTGATCGTCGCAAGCAACGGGCAGGTAGGCGTC 540
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      CTACTGCTGGTGGGAATGGCCCTGGGTCCAAATTAGTCGATTCGAGTTTCCTGTCTAGTA 600
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      AAGTAAACCATACTCACCAGAAGACAACTGCTCGATTTCCCCTGGTTGTTGCACGCACTT 660
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      TTACGAAAATCGGCGAGGAAGAAGGTTATGAGACCGATCATCAGGATTATTGCGAAGTTT 720
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ------------------------------------------------------------
                                                                                   

consensus_11229#0      GTCAACAAGGAGGTGAAATAATGCTGTGTGATACATGTCCACGTGCATATCATTTGGTGT 780
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      ---------------------------------------GGATAATGAATCAAAACCTGT 21
                                                                                   

consensus_11229#0      GTTTAGATCCAGAGTTAGAAGAAGCTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGA 840
consensus_11229#2      ------------------------CTCCAGAAGGAACTTGGTCTTGTCCCCACTGTGAGA 36
consensus_11229#1      TATAGAAGATAGTAACTCTTTAAATACAAAACCACAGCATATTTCAATTAAACCACTTCA 81
                                                 * * *    *     * *       **      *

consensus_11229#0      AGGAAGGTATCACATCAGT---TTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTG 897
consensus_11229#2      AGGAAGGTATCACATCAGT---TTCTAAAGGAAATAAGGAGTGTGAAGATAGTGGATCTG 93
consensus_11229#1      CGTAAGATGTCCCACAAGAGAATTTTTTGTCAAGTACTCAGATTTGTCATACTGGCACT- 140
                        * *** * ** **  **    ** *     ** **   **  *    *** ***  ** 

consensus_11229#0      AACCAGCTGTAACATCTGACAA-GGATGGAAAAATAGTATCTGCT-GTTCACCCAACCTC 955
consensus_11229#2      AACCAGCTGTAACATCTGACAA-GGATGGAAAAATAGTATCTGCT-GTTCACCCAACCTC 151
consensus_11229#1      --CTGAATGGCTCACTGAACTACAGCTAGATGTTCACCACCCAATCATGCTGCGAAATTA 198
                         *    **   **    ** *  * * **     *  * *   *  * *  * **  * 

consensus_11229#0      TCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTAT 1015
consensus_11229#2      TCCTGAAAAAGATGAACATCAAGAATTTTGTACGGAATGTAGAGATGGTGGTGATCTTAT 211
consensus_11229#1      TTTCAAGAAAAATGA-TATGGAAGAGCCTCCACTT--CCTGAAGATGGGAGCACCTATAG 255
                       *    * *** ****  **  *  *   *  **      *  ******  *      ** 

consensus_11229#0      TTGTTGTGATAACTGTCCAGCTAGTTA-CCACATAGCTTGTTTAATTCCACCTCTGGCTA 1074
consensus_11229#2      TTGTTGTGATAACTGTCCAGCTAGTTA-CCACATAGCTTGTTTAATTCCACCTCTGGCTA 270
consensus_11229#1      GGGTCGAGCTCGTGAAAAGGTTGCAGATCCCCACAATTTAGAAGAACGCTTCTATAAATG 315
                         ** * * *         * *    * ** ** *  **     *   *  ** *   * 

consensus_11229#0      ATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAA--AGCCAA 1132
consensus_11229#2      ATATTCCTGAAGGAGTTTGGTTGTGTCCACGTTGTGGCTGTAAACCACTAAA--AGCCAA 328
consensus_11229#1      GGGTGTTAGACCGGAAT-GGTTACAACCGCAAAG-GATCATCGACCATAGAACTGGTAGA 373
                          *    **  *   * ****    ** *   * *    *  ****   **   *   *

consensus_11229#0      GGTGTGTAGAATACTTACATGG--AGATGGTTTGAACCTCCTAAAATTACCGATGAACTT 1190
consensus_11229#2      GGTGTGTAGAATACTTACATGG--AGATGGTTTGAACCTCCTAAAATTACCGATGAACTT 386
consensus_11229#1      GGAGGTCAGACCTGGTATCTAGTTAAATGGCGTGATTTACC--ATATGATGAATGCACAT 431
                       ** *   ***     **  * *  * ****  ***    **  * ** *   *** ** *

consensus_11229#0      GTCCA-TACACACTATCATCA-GCGTTC-ACAAGAACAGGTCCATGAAGTAAAAAGTGAG 1247
consensus_11229#2      GTCAAGTACTCAGATTTGTCATACTGGC-ACTCTGAATGGCTCACTGAACTACAGTT--- 442
consensus_11229#1      GGGAA--GCACGAGACGGTGAAGTTGTTGATATGGATAAATTCATTGAAGAATA------ 483
                       *   *   * *       * *        *     *      **   *   * *      

consensus_11229#0      GAAACGTTAAATGCCGAAA-TTGTGTCGGGGAATGTTTGTACTGTTCCTGATCAAGATTC 1306
consensus_11229#2      -AGATGTTCACCACCCAA--TCATGCTGCGAAATTATTTCAAGAAAAATGATATGGA--- 496
consensus_11229#1      ---TCGTACAATGCGTAAGGTCTTCATGGGACATTTGTGTAGCACCGTGGGTCCTGATGG 540
                            **  *   *  **  *  *   * *  **   *  *        * *   **   

consensus_11229#0      TAAATCAGATAACAACCCAGTCATCTCAGTACCAATAGACTCGGATAAAGCCGCTGTTAA 1366
consensus_11229#2      -AGAGCCTCCA-CTTCCTGAAGATGGGAGCACCTATAG----GGGTCGAGCTCGT----- 545
consensus_11229#1      TTCATTGTCGG--TTGTCAGTTTGTGCAAAAGACATAAAC-CTGGTCGCCGTTCTTCAAA 597
                          *                       *  *   ***      * *        *     

consensus_11229#0      ATTTTTAGCGGATAATGAATCAAAACCTGTTATAGAAGAATAGTACTCTTNTAATACANA 1426
consensus_11229#2      ------------------------------------------------------------
consensus_11229#1      AGAGCTGGCTGCTGAAAATTTAAGTCCTGAATTACTCCGTAAACTACCACCAGATAAATG 657
                                                                                   

consensus_11229#0      ACCACAGCATATTNTCATTTTAACCACTTTCACGTAGACGTCCCACAAGAAAAATTT 1483
consensus_11229#2      ---------------------------------------------------------
consensus_11229#1      TTTGACAGATTTAAAGAAACAATACACTTCGTCACCAAGCTTTCTT----------- 703
                                                                                




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)