|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11231#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 39 consensus length = 812 fasta sequence
[ACGAGCTTCAATGTGTCCTGGTGTTTGAAGTGGCCACGAAGTCCCTTCATCTATAGTGATTTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA-GTAGTAGTAGCAGCAGCAGCAG-TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG-TTTGAAATACA-G-AAAAAAAATGATG-AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG-TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA-ACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCATTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTGTAACTCTTCTATTTAGAAACGTAATTTATTTTATACTTTTAGAATTTGCTGTTATTACTCTGTTAAGGAAATAAAAGTACTAAACAAAAAAAAAAAAAAAAA]
[+] EMBL CD083970 [ACGAGGTTCAATGTGTCCTGGTGTTTGAAGTGGCCACGAAGTCCCTTCATCTATAGTGATTTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATG ]
[+] EMBL CD131235 [ CTTCAATGTGTCCTGGTGTTTGAAGTGGCCACGAAGTCCCTTCATCTATAGTGATTTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TT ]
[+] EMBL CD133831 [ CTTCAATGTGTCCTGGTGTTTGAAGTGGCCACGAAGTCCCTTCATCTATAGTGATTTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G ATAA ]
[+] EMBL CD188599 [ TGGCCACGAAGTCCCTTCATCTATAGTGATTTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTA ]
[-] EMBL CD147696 [ GTCTCATTATTCTATTTCAACGTACTCCCATAAGAAACTGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATT ]
[+] EMBL CD137454 [ GACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA ACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGG ]
[+] EMBL CD137340 [ GACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTCCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA ACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGG ]
[+] EMBL CD137399 [ GACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTG GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA GAAAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA ACAGGCTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGG ]
[-] EMBL CD137446 [ ACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA GAAAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCTTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAAGACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGGC ]
[+] EMBL CD169843 [ AAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCC ]
[+] EMBL CD186438 [ AAGGTTATCGGAAAAGAAGTATGTAGTAGTAGCAGCAGCAGCAGTTTCTAGCAGTATTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAGAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAA ]
[+] EMBL CD168975 [ AAGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGTGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCC ]
[-] EMBL CD186515 [ AGGTTATGGGAAAAGAAGTA GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCT ]
[+] EMBL CD114386 [ cAAG AGTG GTAGTAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114354 [ ccagAGTG GCAGCAGTAGCAGCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA GAAAAAAAAATGATG AAAAAAAACCGCTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG NTGCAAACAACA ]
[+] EMBL CD114428 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCACGTGGACAAACTATCGGTGG TTGCAAACAACATAACCCAC ]
[+] EMBL CD114348 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCAC ]
[+] EMBL CD114366 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACGCTTTGAAATACAGG AAAAAAAATGATG AAAAAAAACCGTTGTATTTTTTGTTATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD088248 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AGAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGATCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACGCCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114502 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGAACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114504 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAGAATGATG AAAAAAAACCGTTGTTTTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114505 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAG AGCGACG TTTG AATACA G AANAAAATGATG AAAAAAAAC ]
[+] EMBL CD114501 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGAACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114516 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD071835 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACCTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAA ]
[+] EMBL CD114473 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAA ]
[+] EMBL CD114411 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCAC ]
[+] EMBL CD071869 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCAC ]
[+] EMBL CD114532 [ GCAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCCGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCAC ]
[-] EMBL CD144691 [ CAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACAT ]
[-] EMBL CD114302 [ CAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATGAAAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACT ]
[-] EMBL CD114374 [ CAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAG ]
[-] EMBL CD114177 [ CAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACT ]
[-] EMBL CD144731 [ CAGCAGCAG TTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACAT ]
[+] EMBL CD114410 [ GCAGTAG TTCTAGCACTGGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACG TTTGAAATACA G AAAAAAAATGATGAAAAAAAAACCGTTGTTTTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAATCTTTGTGCAAAGATATCAGCTTGGGATGAAAGGAGGATGTGGACCAGGTGGACAAACTATTGGTGGTTTGC GACCACATAACCCAC ]
[-] EMBL CD182213 [ gtAATACA G AAAAAAAATGATG AAAAAAAACCGTTGTATTTGCGGATATTGCCCTCATGGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAGCCCAC ]
[+] EMBL CD156988 [ TTTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACA ]
[-] EMBL AI976722 [ TTATGCAAAGATATCAGCATGGGATGAAAGGAGGATATGGACCAGGTGGACAAACTATTGGTGG TTGCAAACAACATAACCCACTTTACCCTAATACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA ACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCATTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTGTAACTCTTCTATTTAGAAACGTAATTTATTTTATACTTTTAGAATTTGCTGTTATTACTCTGTTAAGGAAATAAAA ]
[-] EMBL AI395785 [ ACACCACAATATCCGCTTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATGATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTCTCTCAACCTGGCGGCTCTCACCAA ACAGGTTATTTTCCGCAGCCAGGAATGCCACAGCAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCATTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTGTAACTCTTCTATTTAGAAACGTAATTTATTTTATACTTTTAGAATTTGCTGTTATTACTCTGTTAAGGAAATAAAAGTACTAAACAAAAAAAAAAAAAAAAA]
consensusID : consensus_11231#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 302 fasta sequence
[CAGCTCCAATGATGCCACAACAACATGCAGTCTGTCCTAACCCTGTCATGTTTTCACAGTCAAATGCATTCTTTCAACCTGGCGGCTTGTCACCAAACAGGTTATTTTCCCGCAGCCAGGGAATCCCACAGCAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCATTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTAATTTGCTGTTATTACTCTGTTAAGGAAATAAAAGTACTAAACAAAAAAAAAAAAAAAA]
[-] EMBL AI395401 [CAGCTCCAATGATGCCACAACAACATGCAGTCTGTCCTAACCCTGTCATGTTTTCACAGTCAAATGCATTCTTTCAACCTGGCGGCTTGTCACCAAACAGGTTATTTTCCCGCAGCCAGGGAATCCCACAGCAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCATTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTAATTTGCTGTTATTACTCTGTTAAGGAAATAAAAGTACTAAACAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11231#0 ACGAGCTTCAATGTGTCCTGGTGTTTGAAGTGGCCACGAAGTCCCTTCATCTATAGTGAT 60
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 TTATTCGATAATTATCTATCGTGTCTCATTATTCTACTTCAACGTACTCCCATAAGAAAC 120
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 TGCGACGCAATGGGTAAGAAGAAAGGTTATGGGAAAAGAAGTAGTAGTAGTAGCAGCAGC 180
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 AGCAGTTCTAGCAGTAGTTCTGGTGGCAGGTACAGGCCTGAACGAATTGAGAAGCGACGT 240
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 TTGAAATACAGAAAAAAAATGATGAAAAAAAACCGTTGTATTTGCGGATATTGCCCTCAT 300
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 GGTGCTCTAGCCTGCGACCAAAACTTTATGCAAAGATATCAGCATGGGATGAAAGGAGGA 360
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 TATGGACCAGGTGGACAAACTATTGGTGGTTGCAAACAACATAACCCACTTTACCCTAAT 420
consensus_11231#1 ------------------------------------------------------------
consensus_11231#0 ACCATGACACCACAATATCCGCCTGCACAGCCTTTCAACCCCATGCAACAAGCTCCAATG 480
consensus_11231#1 -------------------------------------------------CAGCTCCAATG 11
**********
consensus_11231#0 ATGCCACAACAACCTGCAGTCTGTCCTAACCCTGGCATGTTTTCACAGTCAAATGCATTC 540
consensus_11231#1 ATGCCACAACAACATGCAGTCTGTCCTAACCCTGTCATGTTTTCACAGTCAAATGCATTC 71
************* ******************** *************************
consensus_11231#0 TCTCAACCTGGCGGCTC-TCACCAAACAGGTTATTTTCC-GCAGCCAGG-AATGCCACAG 597
consensus_11231#1 TTTCAACCTGGCGGCTTGTCACCAAACAGGTTATTTTCCCGCAGCCAGGGAATCCCACAG 131
* ************** ********************* ********* *** ******
consensus_11231#0 CAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCA 657
consensus_11231#1 CAAAATTATGGCCCAGGCCATTATGGGAACCAGCCATATCCCCCTTAATTTTCTAAATCA 191
************************************************************
consensus_11231#0 TTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTTGTAACTCT 717
consensus_11231#1 TTGCAGTACACACATATCTGCTATCACAAGAAAACCAACGAGATATTTGCTT-------- 243
****************************************************
consensus_11231#0 TCTATTTAGAAACGTAATTTATTTTATACTTTTAGAATTTGCTGTTATTACTCTGTTAAG 777
consensus_11231#1 -----------------------------------AATTTGCTGTTATTACTCTGTTAAG 268
*************************
consensus_11231#0 GAAATAAAAGTACTAAACAAAAAAAAAAAAAAAAA 812
consensus_11231#1 GAAATAAAAGTACTAAACAAAAAAAAAAAAAAAA- 302
**********************************
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||