cluster # 11233

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Schistosoma mansoni
cluster # 11233 cluster # 11233 Sequences # 41 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11233#0 length = 955 sequences # 21
consensus_11233#1 length = 861 sequences # 3
consensus_11233#2 length = 828 sequences # 13

consensus_11233#3 length = 544 sequences # 2
consensus_11233#4 length = 402 sequences # 1
consensus_11233#5 length = 212 sequences # 1

consensusID : consensus_11233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 955
fasta sequence

                              [TATTATATATTATATTAAGTTATTACAATTTTTGAAGATGAAATATTAAGTTACTTCACTTTAAAGTTTCGACAACAAAAAAACAAATTCGTATTTATAAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTCGCNCACGTTTATCGGGGTTCCACCTCGTGCCGAATTNTGGCCTCGGAGGG]

[+] EMBL CD076164             [TATTATATATTATATTAAGTTATTACAATTTTTGAAGATGAAATATTAAGTTACTTCACTTTAAAGTTTCGACAACAAAAAAACAAATTCGTATTTATAAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTC                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD075135             [TATTATATATTATATTAAGTTATTACAATTTTTGAAGATGAAATATTAAGTTACTTCACTTTAAAGTTTCGACAACAAAAAAACAAATTCGTATTTATAAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGGGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGGGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTC                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD072895             [                                                                                                  AAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCAT AAAATTATTC                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD073989             [                                                                                                  AAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTA                                                                                                                                                                                                            ]
[+] EMBL CD073406             [                                                                                                  AAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAAAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATT                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AI068230             [                                                                                                           TAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCCTGTTGATATCTGGATCAATTTCCCAT                                                                                                                                                                                                                                        ]
[+] EMBL AI068276             [                                                                                                           TAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAATCATCTGTAAGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AI068185             [                                                                                                           TAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACATGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGACAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AI067378             [                                                                                                           TAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AI067128             [                                                                                                                                                   AGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD140180             [                                                                                                                                                                                                                                      ATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATTAGG                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD140080             [                                                                                                                                                                                                                                            ATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACGTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTC                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD079732             [                                                                                                                                                                                                                                                               TTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTCGCNCACGTTTATCGGGGTTCCACCTCGTGCCGAATTNTGGCCTCGGAGGG]
[-] EMBL CD083909             [                                                                                                                                                                                                                                                                                AGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGcctcgt                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD111180             [                                                                                                                                                                                                                                                                                                     TTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACGGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCCAGGTGATTACGAACCTC                                                                                                                                                                                                              ]
[-] EMBL CD078952             [                                                                                                                                                                                                                                                                                                              TGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTNTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTCGCca                                              ]
[-] EMBL CD063592             [                                                                                                                                                                                                                                                                                                                   CTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCa                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD136934             [                                                                                                                                                                                                                                                                                                                          cTTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATC                                                                                                                                                                                                                                                  ]
[+] EMBL CD136894             [                                                                                                                                                                                                                                                                                                                                          CATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACG                                                                                                                                                                                                                    ]
[-] EMBL CD136909             [                                                                                                                                                                                                                                                                                                                                           ATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAA                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD137897             [                                                                                                                                                                                                                                                                                                                                                                                                 CATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAAGCACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_11233#0
TATTATATATTATATTAAGTTATTACAATTTTTGAAGATGAAATATTAAGTTACTTCACT
TTAAAGTTTCGACAACAAAAAAACAAATTCGTATTTATAAGTTAAATTAGAAATTGAAAA
AAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGAT
TAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTG
AAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGG
CATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAAC
TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGA
AGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTA
GAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACT
GACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA
GGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATT
ACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCC
CATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCC
TCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAA
GCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGT
TTTTCGCNCACGTTTATCGGGGTTCCACCTCGTGCCGAATTNTGGCCTCGGAGGG

consensusID : consensus_11233#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 861
fasta sequence

                              [GNTTTTTTTTAACTTTTTTTTCGTATTTATAAGTTAAATTAG-AATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATT-CCACC-AATAAGATGGACATGAAG-TAGAAC-AACAAGCACAC-AGAATGCATTC-ATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCT-AAAAAGC-AAACAAATGCAC-AGAAGTATTGGT-ATGATACATT-ATTACATGGACTTCAATACTAAAAATATGAAGGGAAACAATTCAGATGAGTAGCATACCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCAGTCCCTC]

[+] EMBL CD073745             [GNTTTTTTTTAACTTTTTTTTCGTATTTATAAGTTAAATTAG ATTTGAAAAAAAAATTAGTCAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATT CCACC AATAAGATGGACATGAAG TAGAAC AACAAGCACAC AGAATGCATTC ATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCT AAAAAGC AAACAAATGCAC AGAAGTATTGGT ATGATACATT ATTACATGGACT                                                                                                                                                           ]
[+] EMBL AI395214             [  TTTTTTTT   TTTTTTTT  TATTTATAAGTTAAATTAGAAATTGAAAAAAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCCACCAAATAAGATGGACATGAAGTTAGAACAAACAAGCACACAAGAATGCATTCAATAAAGCCAATCTAG                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD079475             [                                  TAAATTAG AATTGAAAAAANA  TAGTGAGGGTTCACTAT AATAGTAA TTA CCGAATTCGAGAAAATACGTGA TAATGTGATCATA GGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTG TTATACTGA TGAAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTGGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATT CCACC AATAAGATGGACATGAAG TAGAAC AACAAGCACAC AGAATGCATTC ATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCTAAAAAAGCAAAACAAATGCACAAGAAGTATTGGTAATGATACATTAATTACATGGACTTCAATACTAAAAATATGAAGGGAAACAATTCAGATGAGTAGCATACCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCAGTCCCTC]




>consensus_11233#1
GNTTTTTTTTAACTTTTTTTTCGTATTTATAAGTTAAATTAGAATTGAAAAAAAAATTAG
TGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGATTAATGTGAT
CATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATT
AGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCT
GTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAA
CGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACA
GCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACAACAA
GCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACTGACTGATAA
TAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATA
AAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATA
TGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCTAAAAAGC
AAACAAATGCACAGAAGTATTGGTATGATACATTATTACATGGACTTCAATACTAAAAAT
ATGAAGGGAAACAATTCAGATGAGTAGCATACCATATACAGGCAAGGTGATTACGACCCT
CTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGG
TAGGATCTTGTTCAGTCCCTC

consensusID : consensus_11233#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 828
fasta sequence

                              [TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACACCAAGCACACAGAATGCAT-TCATAAAGCCCATCTAGCTTTGCTCTGTCT-TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT-CCAAGACCATAGGTCC-ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG-TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT-TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCTAAAAACACGAGTACTTCAAGCAGAGTATATGGGAAATATGCAGCCTAAAACTCGGAACACAAGAAACGAAGTGCAATAATACAGCTGCCAAGGT--------CCTCGTGCCGAATTNTTGGCCTCGGAG]

[-] EMBL CD078255             [TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGAAGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTAGAACACCAAGCACACAGAATGCAT TCATAAAGCCCATCTAGCTNTGCTCTGTCT TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCAT AAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTT                                                                                                                                                                           ]
[-] EMBL CD081303             [                                                                                                                              CAAGCACACAGAATGCAT TCATANAGCCCATCTAGCTTTGCTCTGTCT TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCTAAAAACACGAGTACTTCAAGCAGAGTATATGGGAAATATGCAGCCTAAAACTCGGAACACAAGAAACGAAGTGCAATAATACAGCTGCCAAGGT        CCTCGTGCCGAATTNTTGGCCTCGGAG]
[+] EMBL CD060476             [                                                                                                                               AAGCACACAGAATGCATATCATAAAGCCCATCTAGCTTTAGTCCGTCTATCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD140820             [                                                                                                                                AGCACACAGAATGCAT TCATAAAGCCCATCTAGCTTTGCTCTGTCT TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCA                                                                                                                                                                                                                                                        ]
[-] EMBL CD061838             [                                                                                                                                                          CCATCTAGCTTTGCTCTGTCT TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAA GTTTTCATACGTGGAGCTGATCCCGATG AGTGTGATACTCTAGGAG                                                                                                                                                                                                                ]
[-] EMBL CD136715             [                                                                                                                                                                AGCTNTGCTCTGTCT TCTACTGACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCAT                                                                                                                                                                                                                                                       ]
[-] EMBL CD082566             [                                                                                                                                                                                                               TATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCTAAAAACACGAGTACTTCAAGCAGAGTATATGGGAAATATGCAGCCTACAACTCGGAACACAAGAAACGAAGTGCAATAATACAGCTGCCAAGGTCAATGATGCCTCGTGCCGAA TCTTGGCtc     ]
[+] EMBL CD123249             [                                                                                                                                                                                                                                   TTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAACAGCCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTC                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD077635             [                                                                                                                                                                                                                                                            AACGGTACTGAGCATANANATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGG                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD167848             [                                                                                                                                                                                                                                                                                          CTGGAATAGGATCCTTAATTACATACATATGAGGCAATGGATATATTTTAGTTGTCTCGTTGATATTTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTTTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGT                                                                                                                                                 ]
[-] EMBL CD140112             [                                                                                                                                                                                                                                                                                                                            CAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCat                                                                                                                                ]
[-] EMBL CD140147             [                                                                                                                                                                                                                                                                                                                               TGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCAT CCAAGACCATAGGTCC ACAATCGTTGAGATCGACTTGATAGTTTTGCATGGTGGG TTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCat                                                                                                                                ]
[-] EMBL AA999444             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCCAAGACCATAGGTCCTACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGT TGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCT                                                                                                                                          ]




>consensus_11233#2
TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGA
AGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTA
GAACACCAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACT
GACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA
GGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATT
ACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCC
CATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCC
TCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAA
GCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGT
TTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCT
GATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGG
GATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCTAAAAACACGAGTA
CTTCAAGCAGAGTATATGGGAAATATGCAGCCTAAAACTCGGAACACAAGAAACGAAGTG
CAATAATACAGCTGCCAAGGTCCTCGTGCCGAATTNTTGGCCTCGGAG

consensusID : consensus_11233#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 544
fasta sequence

                              [ACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTNTGCTCTGTCTTCTACTGACTGATAATAAGTGTTCNTGCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAATTATTCGTNTCGGGAGGTGGGGGCGGTGGGGGGGGAGCNTATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTT]

[-] EMBL CD078336             [ACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTNTGCTCTGTCTTCTACTGACTGATAATAAGTGTTCNTGCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGGCTCAATAAAACGGTACTGAGCATAAAATTATTCGTNTCGGGAGGTGGGGGCGGTGGGGGGGGAGCNTATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTTTTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTGATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGGATTT]
[-] EMBL CD119349             [                                                                                                                                                                                                                                                                                        ACAAGATCCACAAATCACCTCACGGCAAAAAAATCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAGCATCCAAGACCATAGGTCCGCAATCATTGAGATCGCCTTTATAGTTTTGCATGGTGGGTTTTTCGCCACGTTTATCGGGGTTCCATCTagacgg                                                                                          ]




>consensus_11233#3
ACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTNTGCTCTGTCTTCTACTGA
CTGATAATAAGTGTTCNTGCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAAGG
CTCAATAAAACGGTACTGAGCATAAAATTATTCGTNTCGGGAGGTGGGGGCGGTGGGGGG
GGAGCNTATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCC
ATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATCCCCT
CACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATTAAAG
CATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTGGGTT
TTTCGCCACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGGAGCTG
ATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGTCAGGG
ATTT

consensusID : consensus_11233#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [GTTAAATTAGAATTGAAAAAANAATTAGTGAGGGTTCACTATAAATAGTAAGTAGCCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATAGCATTTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTAGAAATATAGGTAACTCCATTCACGAAACACCATTTAATGAATAAATTTGTAAAATCTTAAGTATTAAATGAATACCTATCACCATTCCACCT]

[-] EMBL CD077640             [GTTAAATTAGAATTGAAAAAANAATTAGTGAGGGTTCACTATAAATAGTAAGTAGCCCGAATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTGAAATAGATAGCATTTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTAGAAATATAGGTAACTCCATTCACGAAACACCATTTAATGAATAAATTTGTAAAATCTTAAGTATTAAATGAATACCTATCACCATTCCACCT]




>consensus_11233#4
GTTAAATTAGAATTGAAAAAANAATTAGTGAGGGTTCACTATAAATAGTAAGTAGCCCGA
ATTCGAGAAAATACGTGATTAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTT
CTTGTGTTTATACTGATTGAAATAGATAGCATTTTTCTTAATCTCTCCAATAGCCAAACC
AGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAG
TGACCACTTGTTTTGGAACTCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGAC
TAACCATCTAGAAATATAGGTAACTCCATTCACGAAACACCATTTAATGAATAAATTTGT
AAAATCTTAAGTATTAAATGAATACCTATCACCATTCCACCT

consensusID : consensus_11233#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 212
fasta sequence

                              [CTAGCTTTGTTCTGTCGTCGACTGACTGATAATAAGTCTTCTTTCCAAGATCCTCCCCACCCACAGGCCTTTTCTTTAAATAAAAAAAAATAGACCGGTCCTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATCTATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATGAAN]

[-] EMBL CD136961             [CTAGCTTTGTTCTGTCGTCGACTGACTGATAATAAGTCTTCTTTCCAAGATCCTCCCCACCCACAGGCCTTTTCTTTAAATAAAAAAAAATAGACCGGTCCTGAGCATAAAAATTATTCATATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATCTATTTTAGTTGTCTTGTTGATATCTGGATCTATTTCCCATATGAAN]




>consensus_11233#5
CTAGCTTTGTTCTGTCGTCGACTGACTGATAATAAGTCTTCTTTCCAAGATCCTCCCCAC
CCACAGGCCTTTTCTTTAAATAAAAAAAAATAGACCGGTCCTGAGCATAAAAATTATTCA
TATCTGGAATTAGATCCTTAATTACATACATATGAGGCAATGGATCTATTTTAGTTGTCT
TGTTGATATCTGGATCTATTTCCCATATGAAN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      TATTATATATTATATTAAGTTATTACAATTTTTGAAGATGAAATATTAAGTTACTTCACT 60
consensus_11233#1      ------------------------------------------------------------
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      TTAAAGTTTCGACAACAAAAAAACAAATTCGTATTTATAAGTTAAATTAGAAATTGAAAA 120
consensus_11233#1      ---------GNTTTTTTTTAACTTTTTTTTCGTATTTATAAGTTAAATTAGAATTGAAAA 51
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      AAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGAT 180
consensus_11233#1      AAAAATTAGTGAGGGTTCACTATAAATAGTAAGTTAGCCGAATTCGAGAAAATACGTGAT 111
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      TAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTG 240
consensus_11233#1      TAATGTGATCATATGGTCTAAACAGTTCTCGTCTCCGGTTTCTTGTGTTTATACTGATTG 171
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      AAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGG 300
consensus_11233#1      AAATAGATTAGCATTTTCTTAATCTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGG 231
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      ------------------------------------------------------------
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      CATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAAC 360
consensus_11233#1      CATGTTTCTGTGCAATTCATAATAGTATGACATCGATAAAGTGACCACTTGTTTTGGAAC 291
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGA 60
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGA 420
consensus_11233#1      TCAGCCAAACGTTCATACGTATAATCATCACGTGAATCGACTAACCATCTGTAAGCCTGA 351
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      AGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTA 120
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      AGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTA 480
consensus_11233#1      AGCAGAACAGCGGGACCCAAATACTTATCACCATTCCACCAATAAGATGGACATGAAGTA 411
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      GAACACCAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACT 180
consensus_11233#3      --ACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTNTGCTCTGTCTTCTACT 58
consensus_11233#5      -------------------------------------CTAGCTTTGTTCTGTCGTCGACT 23
consensus_11233#0      GAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACT 540
consensus_11233#1      GAACAACAAGCACACAGAATGCATTCATAAAGCCCATCTAGCTTTGCTCTGTCTTCTACT 471
consensus_11233#4      -------------GTTAAATTAGAATTGAAAAAANAATTAGTGAGGGTTCA-CTATAAAT 46
                                                             ***    * *    *    * *

consensus_11233#2      GACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA 240
consensus_11233#3      GACTGATAATAAGTGTTCNTGCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA 118
consensus_11233#5      GACTGATAATAAGTCTTCTTTCCAAGATCCTCCCCACCCACAGGCCTTTTCTTTAAATAA 83
consensus_11233#0      GACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA 600
consensus_11233#1      GACTGATAATAAGTCTTCTTTCCAATATCTTCTTCATCCACATTCTTTTTCTTTAAATAA 531
consensus_11233#4      AGTAAGTAGCCCGAATTCGAGAAAATACGTGATTAAT--GTGATCATATGGTCTAAACAG 104
                             **    *  ***     ** *        *        * * *  * **** * 

consensus_11233#2      GGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCC--TTAA 298
consensus_11233#3      GGCTCAATAAAACGGTACTGAGCATAAAA-TTATTCGTNTCGGGAGGTGGGGGCGGTGGG 177
consensus_11233#5      AAAAAAATAGACCGGTCCTGAGCATAAAAATTATTCATATCTGGAATTAGATCC--TTAA 141
consensus_11233#0      GGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCC--TTAA 658
consensus_11233#1      GGCTCAATAAAACGGTACTGAGCATAAAAATTATTCATATCTGGAATTAGATCC--TTAA 589
consensus_11233#4      TTCTCGTC--TCCGGTTTCTTGTGTTTATACTGATTGAAATAGATAGCATTTTTCTTAAT 162
                                   ****     *  *  *   *  *       *             *   

consensus_11233#2      TTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATC-TATT 357
consensus_11233#3      GGGGGAGCNTATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATC-TATT 236
consensus_11233#5      TTACATACATATGAGGCAATGGATCTATTTTAGTTGTCTTGTTGATATCTGGATC-TATT 200
consensus_11233#0      TTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATC-TATT 717
consensus_11233#1      TTACATACATATGAGGCAATGGATATATTTTAGTTGTCTTGTTGATATCTGGATC-TATT 648
consensus_11233#4      CTCTCCAATAGCCAAACCAGGATTCAATCCTTTTGGGCATGTTTCTGTGCAATTCATAAT 222
                                    *  * * *  *  **  *  * * * ****  * *     ** ** *

consensus_11233#2      TCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATC 417
consensus_11233#3      TCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATC 296
consensus_11233#5      TCCCATATGAAN------------------------------------------------ 212
consensus_11233#0      TCCCATATACAGGCAAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCACATATC 777
consensus_11233#1      TCCC---TAAAAAGCAAACAAATGCACAGAAGTATTGGTATGATACATTA-TTACATGGA 704
consensus_11233#4      AGTATGACATCGATAAAGTGACCACTTGTTTTGGAACTCA--GCCAAACGTTCATACGTA 280
                                                                                   

consensus_11233#2      CCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATT 477
consensus_11233#3      CCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATT 356
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      CCCTCACGGCAAGAACGTCGAAATGTCAGGGTAGGATCTTGTTCATTCTTTATCTTGATT 837
consensus_11233#1      CTTCAATACTAAAAATATGAAGGGAAACAATTCAGATGAGTAGCATACCATATACAGGC- 763
consensus_11233#4      TAATCATCACGTGAA--TCGACTAACCATCTAGAAATATAGGTAACTCCAT-TCACGAAA 337
                                                                                   

consensus_11233#2      AAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTG 537
consensus_11233#3      AAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTG 416
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      AAAGCATCCAAGACCATAGGTCCACAATCATTGAGATCGACTTGATAGTTTTGCATGGTG 897
consensus_11233#1      AAGGTGATTACGACCCTCTATATTCATTGCACAAGAACCAC---ATATCCCCTCACGGCA 820
consensus_11233#4      CACCATTTAATGAATAAATTTGTAAAATCTTAAGTATTAAATGAATACCTATCACCATTC 397
                                                                                   

consensus_11233#2      GGTTTTTCGCC-ACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGG 596
consensus_11233#3      GGTTTTTCGCC-ACGTTTATCGGGGTTCCATCTGTAAATGGAAAAGGTTTTCATACGTGG 475
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      GGTTTTTCGCNCACGTTTATCGGGGTTCCACCTCGTGCCGAATTNTGGCCTCGGAGGG-- 955
consensus_11233#1      AGAACGTCGAAATGTCAGGGTAGGATCTTGTTCAGTCCCTC------------------- 861
consensus_11233#4      CACCT------------------------------------------------------- 402
                                                                                   

consensus_11233#2      AGCTGATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGT 656
consensus_11233#3      AGCTGATCCCGTCGCAGTTGAAGCGCAACGAGCGAGACTGAAAGATGATAGCGAAAAAGT 535
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      ------------------------------------------------------------
consensus_11233#1      ------------------------------------------------------------
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      CAGGGATTTCCACATAATGAATTTCAATAAGCAGTGGTTTCTTTGGGCTCTAAAAACACG 716
consensus_11233#3      CAGGGATTT--------------------------------------------------- 544
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      ------------------------------------------------------------
consensus_11233#1      ------------------------------------------------------------
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      AGTACTTCAAGCAGAGTATATGGGAAATATGCAGCCTAAAACTCGGAACACAAGAAACGA 776
consensus_11233#3      ------------------------------------------------------------
consensus_11233#5      ------------------------------------------------------------
consensus_11233#0      ------------------------------------------------------------
consensus_11233#1      ------------------------------------------------------------
consensus_11233#4      ------------------------------------------------------------
                                                                                   

consensus_11233#2      AGTGCAATAATACAGCTGCCAAGGTCCTCGTGCCGAATTNTTGGCCTCGGAG 828
consensus_11233#3      ----------------------------------------------------
consensus_11233#5      ----------------------------------------------------
consensus_11233#0      ----------------------------------------------------
consensus_11233#1      ----------------------------------------------------
consensus_11233#4      ----------------------------------------------------