These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11242#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 41 consensus length = 1640 fasta sequence [GGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGT-AAGGC-AATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT-CCGAAGACCTCCCCACTG-ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA-CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA-ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC-TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAAC----ATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGCTTTGTCAAGT-CATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGG-GCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTG] [-] EMBL CD091740 [GGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGC AATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATTAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGTAGAGGGAGCTATATTGTTATTCGCAGGGATGATACCCAAGACCTCCCCACTG ACAAAA ] [+] EMBL CD069349 [ ATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGC AATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTACGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCG ] [-] EMBL CD195368 [ gAGTATTTATTTGTGTATGATGTATTTGT AAGGCAAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCA ] [-] EMBL CD195305 [ AAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCTACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCA ] [+] EMBL CD127491 [ AGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGCTTAAATCAAC ACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAn ] [+] EMBL CD068170 [ TTCTGTTTAG TAGAATATGTGTCTGGTGTGGTAGATG TGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTC ] [-] EMBL CD068083 [ AGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTTGAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATTAGCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACA TAC CTCA ] [+] EMBL CD085502 [ aAGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCATTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCGGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCCCATCACCATATTACACTCTCACTACATAAACATCTATAACCGAAAACCCA ] [+] EMBL CD195192 [ AGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATC ] [+] EMBL CD195068 [ AGGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATC ] [-] EMBL CD195020 [ GGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCA ] [-] EMBL CD194916 [ GGGAGCTATATTGTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTG ACAAAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCA ] [+] EMBL CD068206 [ GTTATTCAAAGGGATGAT CCGAAGACCTCCCCACTGTACAAGAACTACGCGT CGAGCGAGCCCAATTAGGGATCGACGCAGGCTTC ] [+] EMBL CD091260 [ CGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCGACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAg ] [+] EMBL CD091273 [ CGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACGCTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATAACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATC ] [+] EMBL CD091283 [ CGGAGTGCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAAGTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACATCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATAACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCT ] [-] EMBL CD094954 [ TTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTA ] [-] EMBL CD132250 [ TCAACAATAACATACCTAGTATTCTTCAACACATAACACTCAATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAA ] [-] EMBL CD153948 [ CTAACAACATACACAACCATTCGCATCACCATATTACACTCTCACTACATAAACATTTATAA CGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAAC ATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGCTTTGTCA ] [+] EMBL CD085316 [ AATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACAAACCATACTGAAACAGTGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAAC ATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGCTTTGTCAAGT CATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCA ] [-] EMBL CD085182 [ ATGCACTCGCAAACATCAATTACAATATTCAAAA ACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGC TAAATCAACAACATCTTTCAGGCAGAGCACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAAC ATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAG ] [-] EMBL CD085162 [ TGCACTCGCAANCATCAATTNCAATA TCAAAANCCACAACCCACATATACTACTTCACATCAATTCAGTAGACAAAATCCANCATCATACGCAACTCGGGCAATGNCATCGCGN TAAATCAACAGCATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACACACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAACATATATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGCTTTGTCAAGT CATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTA ] [-] EMBL CD134389 [ ATTACCATCATTTCACAAATCCCAATGTACTAATACTATTCACAACACCTAATCCTCAAATCAAAACAAACACACCATACTGAAACAACGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTA ] [-] EMBL CD090982 [ nCAATGTNNTANTNNTANTNNCAACACCTAATCCTCAAATCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAA ] [-] EMBL CD085218 [ TACTATTCACAACACNTAATCCCCAAATCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACGCTCCTCTCAGTCAGCAACAAGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAACTAATATCCTTCTCACATAACTAAC ATATATATATATATTAGACACAAATATCATACGTGATTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGCTTTGTCAAGT CATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGGATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGCATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGT ] [+] EMBL CD179645 [ ATTCAAGGCTTTGTCAAGT CATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAGCTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAACAATGACCATGTCATGGGATCTTGTAATGgcaa ] [+] EMBL CD091862 [ ATTCAAAGCTTTGTCAAGTACATTCCAACTACATTGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACACAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAA ] [-] EMBL CD091907 [ TTCAAAGCTTTGTCAAGT CATTCCAACTACATTGCATTACCACACACTTGTCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAG ] [-] EMBL CD091827 [ TTCAAAGCTTTGTCAAGT CATTCCAACTACATTGCATTACCACACACTTGTCAACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATGTATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCTTTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTAgt ] [+] EMBL CD129709 [ CACTTGGCTACTTATTCCCTTGTAGCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAATGTGAAGTTCGGTAAAT ] [+] EMBL CD129706 [ gggTTGCCTACTTATTCCCTTGTAGCTTCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAGTCAACTAGATCAGTGTGAAGTTCGGTAG ] [+] EMBL CD132459 [ ctACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACTTTGTGACACGGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAG ] [+] EMBL CD187834 [ TACTCAGAGGACTCAGGCGCACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAGTGCGATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTATGTATGATGTATTTGCGAACGCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGGTGCTTTCT ] [+] EMBL CD187826 [ TCAGGCACACCCACTAACAATGTTGAATTACGAACGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTATGTATGATGTATTTGCGAAGGCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGG GCTTTCTGTTTAGTTTGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTG] [+] EMBL CD123870 [ tttttttCCCACTAACAATGNNGAATTACGAACGACCCATATATACACATATACATTGNGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTATTGCGAAGTACCAGTGAACCACTGTCTATCTGTTGGGTTTGGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAG ] [-] EMBL CD129759 [ CGACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAGTCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAACGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTG ] [+] EMBL CD068260 [ gatgCCATATATACACATATACA TGTGACACAGGATAATTACCTTCGAATGCAATGGTCCCATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTCAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTT ] [+] EMBL CD191463 [ GCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAGGGCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGCTAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGT GCTTTCTGTTTAGTTTGAA ] [-] EMBL CD191434 [ CAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGAGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGT GCTTTCTGTTTAGTTTGAAT ] [-] EMBL CD135416 [ TATGACTAAGTATATGAACTCATTTAGTCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAAGGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGGTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGCAATTGTTGTCTGTTTATGGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAGAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTT GG TCTTTCTGTTTAGTTT AATATnntt ] [-] EMBL CD191420 [ TATGAACTCATTTAATCAACTAGATCAGTGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGTGCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGCAATTGTTGTCTG TTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGT GCTTTCTGTTTAGTTTGAAT ] consensusID : consensus_11242#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 430 fasta sequence [TTATAACGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGCTAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACCCATGTTGGACATCACTGCATAAACATTTATAACGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGCTAAATCAACAACAT] [+] EMBL CD187203 [TTATAACGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGCTAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCATCATTCCACCCATGTTGGACATCACTGCATAAACATTTATAACGAAAAACCAATTCTCAACAAAAATCACCATCAAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATACTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCATCGCGCTAAATCAACAACAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11242#0 GGTGTTTATGGAATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTAAG 60 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GCAATTGTTGTCTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAG 120 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 TGTATGAAGTGGGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGTGCTTTCTGTTTAGTT 180 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 TGAATATGTGTCTGGTGTGGTAGATGTTGGTGTTAGATTTGCGTGTGGTTGGCAGTAGTT 240 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GAGTGAAGAGGGAGCTATATTGTTATTCAAAGGGATGATCCGAAGACCTCCCCACTGACA 300 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 AAAACTACGCGTCCGAGCGAGCCCAATTAGGGATCGTCGCAGGCTTCAACACGCCGGAGT 360 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GCAATGGCGAGCCTCCACCTGGGGCCAGGGCATTCGTGATCACCCTGGTCCCGGCGCCAA 420 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GTAAGTTTAAGCAAACGATTCAACAATAACATACCTATTATTCTTCAACACATTACACTC 480 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 AATCATCAATTAGCAAACATTTCACACTAACAACATACACAACCATTCGCATCACCATAT 540 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 TACACTCTCACTACATAAACATTTATAACGAAAAACCAATTCTCAACAAAAATCACCATC 600 consensus_11242#1 ----------------------TTATAACGAAAAACCAATTCTCAACAAAAATCACCATC 38 ************************************** consensus_11242#0 AAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATA 660 consensus_11242#1 AAATACACAAATGCACTCGCAAACATCAATTACAATATTCAAAAACACCAACCACATATA 98 ************************************************************ consensus_11242#0 CTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCAT 720 consensus_11242#1 CTACTTCACATCAATTCAGTAGACAAAATCCAACATCATACGCAACTCGGGCAATTGCAT 158 ************************************************************ consensus_11242#0 CGCGCTAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCAT 780 consensus_11242#1 CGCGCTAAATCAACAACATCTTTCAGGCAGAACACACATCACACAAACACAGATTACCAT 218 ************************************************************ consensus_11242#0 CATTCCAC-------AAATCCCAATGTACTAATACTATTCAC-AACACCTAATCCTCAAA 832 consensus_11242#1 CATTCCACCCATGTTGGACATCACTGCATAAACATTTATAACGAAAAACCAATTCTCAA- 277 ******** * ** ** * ** * * * ** ** * * *** ***** consensus_11242#0 TCAAAACAAACAAACCATACTGAAACAATGCATCTCCGGGAACAACACTCCTCTCAGTCA 892 consensus_11242#1 CAAAAATCACCATCAAATACACA---AATGCAC--TCGCAAACATCAATTACAATATTCA 332 **** * ** **** * ****** ** **** ** * * *** consensus_11242#0 GCAACA--AGTGACAGAGACCGCGACACATTGACCAACACTCTACGGGCAATAACACAAC 950 consensus_11242#1 AAAACACCAACCACATATACTACTTCACATCA------ATTCAGTAGACAAAATCCAACA 386 **** * *** * ** * ***** * ** * *** * * * consensus_11242#0 TAATATCCTTCTCACATAACTAACATATATATATATATTAGACACAAATATCATACGTGA 1010 consensus_11242#1 TCATACGCAACTCGGGCAATTG-CATCGCGCTAAATCAACAACAT--------------- 430 * *** * *** ** * *** ** ** *** consensus_11242#0 TTACATTTACCACAACCACAAACATCAATGTCACTCAAGTCAGCTGTCCGTATTCAAAGC 1070 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 TTTGTCAAGTCATTCCAACTACATCGCATTACCACACACTTGTCTACTTATTCCCTTGTA 1130 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GCTGCACAACCACTACTCAGAGGACTCAGGCACACCCACTAACAATGTTGAATTACGAAC 1190 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GACCCATATATACACATATACATTGTGACACAGGATAATTACCTTCGAATGCAATAGTCC 1250 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 CATCACAATCACAACGCAACTATGACTAAGTATATGAACTCATTTAATCAACTAGATCAG 1310 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 TGTGAAGTTCGGTAGATGGAAATGTGCACGAAGAATGACAATGTCATGGTATCTGTTAGT 1370 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GCGAAGTACCAGTGAACCAGTGTCTATCTGTTGGGTTGTGTAAGAGCTGGTGTTTATGGA 1430 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 ATGAGTGAAATGGTGTAAGTATTTATTTGTGTATGATGTATTTGTGAAGGCAATTGTTGT 1490 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 CTGTTTATAGATGATTGATGGGTCGTTATATTGTGGAATGAAAGTAAAGTGTATGAAGTG 1550 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 GGTGAAGGTGAGTTTATTCGAGCGATAGTTTGGGGCTTTCTGTTTAGTTTGAATATGTGT 1610 consensus_11242#1 ------------------------------------------------------------ consensus_11242#0 CTGGTGTGGTAGATGTTGGTGTTAGATTTG 1640 consensus_11242#1 ------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||