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Schistosoma mansoni
cluster # 11278 cluster # 11278       Sequences # 46       consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11278#0 length = 1526 sequences # 30  
consensus_11278#1 length = 1128 sequences # 12  
 consensus_11278#2 length = 502 sequences # 2  
consensus_11278#3 length = 249 sequences # 1  
consensus_11278#4 length = 179 sequences # 1  
consensusID : consensus_11278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 30
consensus length = 1526
fasta sequence 
                              [TTTTTTTTTTTTTTTTTTTTTTTTAACCAAGGAATGACAATCATCATTATTTTAAATACA-TTAGTGAATGATTCTCACTTTTGTGATGCCATATATAAATATGAGAGGACACT--------AGAGAGAGAGAGAGAGAGAGCGCAGAAGAGTGGAGTGGAGGGGAGTAAGAAGTGATTGAAAAGGATACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACT-TTTTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA-TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC-TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT-AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA-CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATTTA]

[+] EMBL AI395794             [TTTTTTTTTTTTTTTTTTTTTTTTAACCAAGGAATGACAATCATCATTATTTTAAATACA TTAGTGAATGATTCTCACTTTTGTGATGCCATATATAAATATGAGAGGACACT        AGAGAGAGAGAGAGAGAGAGCGCAGAAGAGTGGAGTGGAGGGGAGTAAGAAGTGATTGAAAAGGATACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACT TTTTACATTGTTCCCATGGGAATTGCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCCTGACTATTACACCAGGTCGTAAATCGAAA TCTTCACAATAATATCCAATAA TTCTTATCGCTTATCTTTGCAGTTCGATAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD074352             [                                        TCATCATTATTTTAAATACACTTAGTGAATGATTCTCACTTTTGTGATGCCATATATAAATATGAGAGGACACTAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCAGAAGAGTGGAGTGGAGGGGAGTAAGAAGTGAGTGAAAAGGATACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACT TTTTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD063831             [                                                                                                                                                                                                                                                                       TATA TCATGA TAGA  TTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACT TTTTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAG TTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD080440             [                                                                                                                                                                                                                                                                                                              ATGCC TGATC TTCACA GTTAGAATGT  ACTNNTNTACA TGTTCCCAT GGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD113776             [                                                                                                                                                                                                                                                                                                                                   TAGAATGTGAACT TTTTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCGGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATTATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTCCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCTGCTGCAGGTAAATGATATgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD163632             [                                                                                                                                                                                                                                                                                                                                         GTTAACT TTGTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD151590             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD190420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCGTGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD118411             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCACGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCGCTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACCGTTAAGACGTTGCAACTCTTATAATC                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD180559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACCGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACGTTG                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD084397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAATGATTTTTCGGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTG TGCTCAATTACTGTTAAGACGTTGCA                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD078213             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCctcgtgccg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD095550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD155956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAA TCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAC TTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD158020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCACCAATTACAAATTCTTCCAGCTGGATTTAAATGATATTTAGTTTCTTCATCTAAGAGATTTGCAGGGATCACTTTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD140160             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTAGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAACAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAG                                                                                                                                                                ]
[+] EMBL CD156003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCA CCCCACCATTTGTGAAAACAGGCATCCTGNGGTAGTTTAAGCACACGGCCAGGAAT   ]
[-] EMBL CD163090             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAG AATTCATCAAGTATGGCAT                                                                                                                                            ]
[+] EMBL CD095179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGATGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAGCA                                                                                ]
[+] EMBL CD095162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGCT AAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAA CCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAAT   ]
[-] EMBL CD095329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TACATTTACGCCTACATGTGGCTAGACGTTATTTTAAAGCGTGTGATAGGGTGACTGTTAAAGGGCATGCATTCTTCAGTTTCGTCAG TGCATAACCCAAACA TAAACCTTGATCTCCAGCACCGATATCCTCAA TTTTCTTCCCTCATGTACACCTTNTGCGATATCTGAACTNTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAGCAA                                                                               ]
[-] EMBL AI976635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCC                                ]
[-] EMBL AI977541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTACACCTTTTGCAATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCGATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATCAGTCCTCTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAGCAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTA                    ]
[-] EMBL CD148431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATTTA]
[-] EMBL CD097795             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATT  ]
[-] EMBL CD148436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCAACTCTTATAATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATTTA]
[-] EMBL CD151891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATT  ]
[+] EMBL CD110916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGGATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATT  ]
[+] EMBL CD110982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTGGCGCAGAAATTCATCAAGTATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGGATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGCCAGGAATT  ]
[-] EMBL CD150043             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGTAGTTTAAGCACACGGgatg       ]




>consensus_11278#0
TTTTTTTTTTTTTTTTTTTTTTTTAACCAAGGAATGACAATCATCATTATTTTAAATACA
TTAGTGAATGATTCTCACTTTTGTGATGCCATATATAAATATGAGAGGACACTAGAGAGA
GAGAGAGAGAGAGCGCAGAAGAGTGGAGTGGAGGGGAGTAAGAAGTGATTGAAAAGGATA
CGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTT
ATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTT
GATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGAC
CAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGA
CTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGC
TTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAG
CGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCA
CCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACG
CTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTA
AACCAGCATCACTTTGAGGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATT
TAGTTTTCTCATCTAAGAGATTTGCAGGGATCACTTCTTTAATAACATATTCCAATAAAT
CAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGT
GTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCT
TTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTAT
TTAAAGCGTGTGATAGGGTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCAT
AACCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTA
CACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTAT
AATCTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGTTT
TTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACTTT
TTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAGTA
TGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGAAG
TGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGGGT
AGTTTAAGCACACGGCCAGGAATTTA

consensusID : consensus_11278#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1128
fasta sequence 
                              [ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAA-AAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT-GACGA-TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA-GTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTG--GAGAAGACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGAACAAAGTGACCATAAACACCAGTTTGTAAATAACGAGGTGTACGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTTACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTTCGAC-AAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAGTTCCCTCGTGCAAAATTNTTGGCTG]

[-] EMBL CD127796             [ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAGAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD170903             [                TGTGAGTGGAGAAGACGACGAA AAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAATAGGGCGGATCGCTCGCTGAATATCATGATTGTGATGATGGAGCTGATTGTCGGAATGGTCACTCTGACGATGTGACGTGG GACGACGACGAACAGCGTGATGGTGTGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD129228             [                    AGTGGAGAAGACGACGAA AAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGAAGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTG  GAGAAGACGACcaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD127795             [                    AGTGTAGAAGACGACGAA AAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD169410             [                       GGAGAAGACGACGAA AAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGACGAAAAGCATGACGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGCGATGATTGTAGGAATGGTCACGATGACca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD166973             [                                          cgTGATGGTGCGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACTAAAAGCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD062850             [                                                      ATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTGGGAATGGTCACGATGGACGANTGTGAGTGGAGAAGACGACGNAAAGCATGATGG GTGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD072473             [                                                                                              GGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD129928             [                                                                                                                                                GGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGAGCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGACGAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD129948             [                                                                                                                                                GGAATGGTCACGAT GACGA TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGA GTGGAGAAGACGGCGAAAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD069273             [                                                                                                                                                                                                                                                                                                                                                                                                         GGA TTCTCGCTGAATATCATGA TTTGATGATGGAGATGA TGTAGGAATGGTCACGATGACGATGTGAGTG  GAGAAGACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGAACAAAGTGACCATAAACACCAGTTTGTAAATAACGAGGTGTACGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTTACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTTCGAC AAGACCAGATTT                                                                                                                                                                                                                                                                ]
[-] EMBL CD079567             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gagtaaGAAGTGAGTGAAAAGGATACGACTAGCAAATGCANAATTACGTAAAGTAGTAAACAAACAAAATNTGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGACCAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACG TCGACAAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAGTTCCCTCGTGCAAAATTNTTGGCTG]




>consensus_11278#1
ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACT
TGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGA
TTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTGGAGAAGACGA
CGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAG
GGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCAC
GATGACGATGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTG
ACCTTGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATG
ATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTGGAGAAGACGACTAGCAAA
TGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTTATTATATATAT
ATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTTGATCTTTCACA
GGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGAACAAAGTGACCA
TAAACACCAGTTTGTAAATAACGAGGTGTACGGAGATCCAATTCCTTGACTATTACACCA
GGTCGTAAATCGAAATTCTTTACAATAATATCCAATAATTTCTTATCGCTTATCTTTGCA
GTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAGCGTACGAAAGC
TGGACTAGGACACGTTCGACAAGACCAGATTTTACAAGGGATTTAGCCACCCAACGTGCT
GCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACGCTCCGCCCCCA
TGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTAAACCAGCATCA
CTTTGAGGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCA
TCTAAGAGATTTGCAGGGATCAGTTCCCTCGTGCAAAATTNTTGGCTG

consensusID : consensus_11278#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 502
fasta sequence 
                              [GGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATNTGCAGGGATCACTTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAACCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATAGCTGTTAAGACGTTGCAACTCCTTTCCTTCCTAGGCATGGTTAGTGCGGTCAGAATTCTTACAC]

[-] EMBL CD150439             [GGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAGAGATNTGCAGGGATCACTTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGGGTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAACCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCTGAACTTTGTTGCTCAATAGCTGTTAAGACGTTGCAACTCCTTTCCTTCCTAGGCATGGTTAGTGCGGTCAGAATTCTTACAC]
[-] EMBL CD158003             [                                                                                                                                                                                      AGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTT AATCGGGACCTGCCCAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTT TTTAAAG                                                                                                                                                                                                                     ]




>consensus_11278#2
GGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATTTAGTTTTCTCATCTAAG
AGATNTGCAGGGATCACTTCTTTAATAACATATTCCAATAAATCAGCTCGAACTTTCTCC
AAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGTGTACTCGTAAAGGTCGA
CAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCTTTGAATCGGGACCTGCC
CAAGGCAGGATACCATTACGCCTACATGTGGCTAGACGTTTATTTAAAGCGTGTGATAGG
GTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCATAACCAAACATTAAACCT
TGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGTACACCTTTTGCGATATCT
GAACTTTGTTGCTCAATAGCTGTTAAGACGTTGCAACTCCTTTCCTTCCTAGGCATGGTT
AGTGCGGTCAGAATTCTTACAC

consensusID : consensus_11278#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence 
                              [TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAGAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGGAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATG]

[+] EMBL CD170848             [TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAGAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGGAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATG]




>consensus_11278#3
TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTGACCTTGAC
GAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAAT
GGTCACGATGACGATGTGAGTGGAGAAGACGACGAAGAGCATGATGGTGTGATTCACTTG
ATGCTGACCTTGAAGATGACCTTGACGGAGAGGGCGGATTTCTCGCTGAATATCATGATT
TTGATGATG

consensusID : consensus_11278#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 179
fasta sequence 
                              [NNNTNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAAGGAAAGACAATCATCATTATTTTAAATACATTAGTGAATGATCCTCACTTTTGTGATCCCATATNTAANTNTGAGAGGCACCTNNANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG]

[+] EMBL AI394822             [NNNTNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAAGGAAAGACAATCATCATTATTTTAAATACATTAGTGAATGATCCTCACTTTTGTGATCCCATATNTAANTNTGAGAGGCACCTNNANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG]




>consensus_11278#4
NNNTNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAA
GGAAAGACAATCATCATTATTTTAAATACATTAGTGAATGATCCTCACTTTTGTGATCCC
ATATNTAANTNTGAGAGGCACCTNNANAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11278#0      TTTTTTTTTTTTTTTTTTTTTTTTAACCAAGGAATGACAATCATCATTATTTTAAATACA 60
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TTAGTGAATGATTCTCACTTTTGTGATGCCATATATAAATATGAGAGGACACTAGAGAGA 120
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      GAGAGAGAGAGAGCGCAGAAGAGTGGAGTGGAGGGGAGTAAGAAGTGATTGAAAAGGATA 180
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATTTGTGTCTCCAATTT 240
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      ATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAAAAAATGGATGCCTT 300
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      GATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGGGAATTCCGGTCGAC 360
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CAAAGTGACCATAAACAGCAGTTTGTAAATAACGAGGTGTTCGGAGATCCAATTCCTTGA 420
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CTATTACACCAGGTCGTAAATCGAAATTCTTCACAATAATATCCAATAATTTCTTATCGC 480
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTCTGCAATACCGATAG 540
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CGTACGAAAGCTGGACTAGGACACGTCGACAAAGACCAGATTTTACAAGGGATTTAGCCA 600
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ------------------------------------------------------------
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATCTTTCCCAGAAAACG 660
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ---------------------ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAA 39
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      CTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGATTTTTCTGCCAGTTA 720
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      AGCATGATGGTGTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGG 99
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      AACCAGCATCACTTTGAGGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATT 780
consensus_11278#2      -----------------GGACCACCAATTACAAATCTTCCAGCTGGATTTAAATGATATT 43
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ATTTCTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGA 159
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TAGTTTTCTCATCTAAGAGATTTGCAGGGATCACTTCTTTAATAACATATTCCAATAAAT 840
consensus_11278#2      TAGTTTTCTCATCTAAGAGATNTGCAGGGATCACTTCTTTAATAACATATTCCAATAAAT 103
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      CGATGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTG-ACCT 218
consensus_11278#3      ---TGTGAGTGGAGAAGACGACGAAAAGCATGATGGTGTGATTCACTTGATGCTG-AC-- 54
                                                                                   

consensus_11278#0      CAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGT 900
consensus_11278#2      CAGCTCGAACTTTCTCCAAAGTTACATGTTCATCATGCTGTGTAGAAATGACCACTGTGT 163
consensus_11278#4      --------NNNTNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 52
consensus_11278#1      TGAAGATGACCTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGG 278
consensus_11278#3      ----------CTTGACGAAGAGGGCGGATTTCTCGCTGAATATCATGATTTTGATGATGG 104
                                  *                                                

consensus_11278#0      GTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCT 960
consensus_11278#2      GTACTCGTAAAGGTCGACAAGCTCCATGATCATTTAAATACTCTACCGTCACCTGAGTCT 223
consensus_11278#4      NNAACC--AAGGAAAGACAATCATCATTAT--TTTAAATACATTAGTG---AATGATCCT 105
consensus_11278#1      AGATGATTGTAGGA--ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAAAGCAT 336
consensus_11278#3      AGATGATTGTAGGA--ATGGTCACGATGACGATGTGAGTGGAGAAGACGACGAAGAGCAT 162
                         *        *    *    *   ** *   * * * *     *          *   *

consensus_11278#0      TTGAATCGGGACCTGCCCAAGGCAGGATACCATTAC-GCCTACATGTGGCTAGACGTTTA 1019
consensus_11278#2      TTGAATCGGGACCTGCCCAAGGCAGGATACCATTAC-GCCTACATGTGGCTAGACGTTTA 282
consensus_11278#4      CACTTTTGTGATC--CCATATNTAANTNTGAGAGGC-ACCTNNANAGAGAGAGAGAGAGA 162
consensus_11278#1      GATGGT-GTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGAAGAGGGCGGATTT 395
consensus_11278#3      GATGGT-GTGATTCACTTGATGCTGACCTTGAAGATGACCTTGACGGAGAGGGCGGATTT 221
                            * * **    *   *                  ***  *    *   *       

consensus_11278#0      TTTAAAGCGTGTGATAGGGTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCA 1079
consensus_11278#2      TTTAAAGCGTGTGATAGGGTGACTGTTAAGGGCATGCATTCTTCAGTTTCGTCAGTTGCA 342
consensus_11278#4      GAGAGAGAGAGAGAGAG------------------------------------------- 179
consensus_11278#1      CTCGCTGAATATCATGATTTTGATGATGGAGATGATTGTAGGAATGGTCACGATGACGAT 455
consensus_11278#3      CTCGCTGAATATCATGATTTTGATGATG-------------------------------- 249
                             *      *                                              

consensus_11278#0      TAACCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGT 1139
consensus_11278#2      TAACCAAACATTAAACCTTGATCTCCAGCACCGATATCCTCAATTTTTCTTCCCTCATGT 402
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      GTGAGTGGAGAAGACGACTAGCAAATGCAAAATTACGTAAAGTAGTAAACAAACAAAATT 515
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      ACACCTTTTGCGATATCTGAACTTTGTTGCTCAATTACTGTTAAGACGTTGCAACTCTTA 1199
consensus_11278#2      ACACCTTTTGCGATATCTGAACTTTGTTGCTCAATAGCTGTTAAGACGTTGCAACTCCTT 462
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      TGTGTCTCCAATTTATTATATATATATGTATATTCATGATTAGATTTTCAAAGAAGAAAA 575
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TAAT-CTAAACCCTTGTGAGTATCATCGTAACCTATGTGTTTCACAACATTGCGGACAGT 1258
consensus_11278#2      TCCTTCCTAGGCATGGTTAGTGCGGTCAGAATTCTTACAC-------------------- 502
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      AAAATGGATGCCTTGATCTTTCACAGGTTAGAATGTTAACTTTTTACATTGTTCCCATGG 635
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TTTTTGTATATCAACTACAGCGTTCGATGAGATTTCACCTCCAACAAGAATAAGTCCACT 1318
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      GAATTCCGGTCGAACAAAGTGACCATAAACACCAGTTTGTAAATAACGAGGTGTACGGAG 695
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TTTTACGAAAGATTCACACGCTACTTTGGCTTCGGGATCTTGGCGCAGAAATTCATCAAG 1378
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ATCCAATTCCTTGACTATTACACCAGGTCGTAAATCGAAATTCTTTACAATAATATCCAA 755
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      TATGGCATCACTTATCTGATCACAAACTTTGTCTGGATGTCCTTCACCAACAGACTCAGA 1438
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      TAATTTCTTATCGCTTATCTTTGCAGTTCCATAACTGTTTACATTAATAGCCAACGGTTC 815
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      AGTGAACAAAAATGTGTCCGATCCGGCATCCCCACCATTTGTGAAAACAGGCATCCTGGG 1498
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      TGCAATACCGATAGCGTACGAAAGCTGGACTAGGACACGTTCGACAAGACCAGATTTTAC 875
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      GTAGTTTAAGCACACGGCCAGGAATTTA-------------------------------- 1526
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      AAGGGATTTAGCCACCCAACGTGCTGCATAAGCTGCAGATCGATCAACTTTGGAATAATC 935
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      TTTCCCAGAAAACGCTCCGCCCCCATGTGCACCCCAGCCTCCGTATGTGTCTACAATGAT 995
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      TTTTCTGCCAGTTAAACCAGCATCACTTTGAGGACCACCAATTACAAATCTTCCAGCTGG 1055
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#4      ------------------------------------------------------------
consensus_11278#1      ATTTAAATGATATTTAGTTTTCTCATCTAAGAGATTTGCAGGGATCAGTTCCCTCGTGCA 1115
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#0      -------------
consensus_11278#2      -------------
consensus_11278#4      -------------
consensus_11278#1      AAATTNTTGGCTG 1128
consensus_11278#3      -------------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)