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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11323#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 41 consensus length = 655 fasta sequence
[TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA-GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA-GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT-GTCAA-TTGAATATCCTAAAGATACATC-GGATGCTATCACTAAAGTTCAGAG-CCAAGGAAGAATCATGA-TAGCG-AACGCCAAACGTCATGCAGATG-C-TT-GTTTAAAG-ATGAAAGGTAGTGCAG-AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG-AAACCAATATCTTTAGGC-AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCNATTANTTTGTACCCTCCATGCCCCCTAANTTTANTGGAAATTACACAT]
[-] EMBL CD094773 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ]
[-] EMBL CD094915 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ]
[-] EMBL CD094797 [TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGC ]
[-] EMBL CD097501 [ AACGGTTAACCTTGGAGTGGGTTCTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAA ]
[+] EMBL CD136524 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG CTTT GTTT AAG ATGAAAG ]
[+] EMBL CD136437 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTANAGATACATC GGATGCTACCACTANAGTTCAGAG CCAAGGAAAGATCATGA TAGCG AACG ]
[+] EMBL CD121052 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCC ]
[+] EMBL CD136601 [ TTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGNGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCT AATGCCCG AACATCAt ]
[-] EMBL CD132181 [ TAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATC ]
[+] EMBL CD188858 [ TGGAGTGGGTTTTTTATCTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG C ]
[+] EMBL AA559489 [ ggTTTTTATTTCTAGCGATGACCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGGATAACATCGCTTCCANAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCNCAATCCCA GGACTGGTANATAANTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCA ]
[+] EMBL AA559382 [ CCTCTAAGCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGGACTGGTAGATAAGTTCAAGAAGCAATATNCAGCTTTGGTCAA TTGAATATCCTNAAGATACATCGGGATGCTATCACTAAAGTTCAGAGCCCAAGGAAGAATCNTGANTNGCGAAANGCCAAACGTCNTGCNGATG C TTGGTTTAAAGAATGAAAagg ]
[+] EMBL BG932182 [ GCGGGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCG ]
[+] EMBL CD132613 [ CTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTA ]
[+] EMBL CD132572 [ CTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAGTATG AAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACT ]
[+] EMBL CD188176 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAACCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTG ]
[+] EMBL CD188182 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGC ATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG ANACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGG ]
[+] EMBL CD188207 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGGTG C TT GTTTAAAG ATGAAAGGTAGTACAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAGAGGTCTGCACCGCCG ]
[+] EMBL CD188160 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTACGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAGCTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC ]
[+] EMBL CD132604 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAGGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGNTGTGCCAGAAATCAT ]
[+] EMBL CD132570 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGANAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG ]
[+] EMBL CD132603 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCCAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCATGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAAC AACTGCCTCCTGTAGA ]
[+] EMBL CD132596 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAATGAAAGCTGCTCTA ]
[+] EMBL CD132593 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATGNC TT GTTT AAG ATGAAAGGTAGTGCAGAAAAAAATGAAg ]
[+] EMBL CD132567 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTG ]
[+] EMBL CD132579 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGT ]
[+] EMBL CD188206 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCCTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCCCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTCTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATG ]
[+] EMBL CD188173 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACAT ]
[+] EMBL CD188178 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGCAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACA ]
[+] EMBL CD188226 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATGACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTCCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAA ]
[+] EMBL CD188218 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGGTGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAA ]
[+] EMBL CD132598 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAA GGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGACAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGAAGCGAACGGTTTATCGAACGCCGGNNAACNNATATC TCAGGCAAATACGG CA TTTANAAA GTCTGCACCCGCGA TCATT GGACTTC ATTA ]
[-] EMBL CD136552 [ GAACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAG ]
[-] EMBL CD136550 [ ACACTATGCCCATGTTGTCGCAATCCCA GGACTGGTAGATAAGTTCAAGAAGCAATATACAGC TT GTCAATTTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAG ]
[+] EMBL CD114489 [ AGATAAGTTCAAGAAGCAATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCACCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTC ]
[-] EMBL CD130312 [ AAGTTCAAGAAGCAATATACAGC TT GTCAATTTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ]
[+] EMBL CD068070 [ AGAAGC ATATACAGCTTT GTCAA TTGAATATCCTAAAGATACATC GGATGCTATCACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTC ]
[+] EMBL CD136449 [ CACTAAAGTTCAGAG CCAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCA ]
[-] EMBL CD130302 [ CAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ]
[-] EMBL CD130367 [ CAAGGAAGAATCATGA TAGCG AACGCCAAACGTCATGCAGATG C TT GTTTAAAG ATGAAAGGTAGTGCAG AAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTA ]
[+] EMBL AA559519 [ AAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGG AAACCAATATCTTTAGGC AATACGGACATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTNCTAGTTACNTATTCNATTANTTTGTACCCTCCATGCCCCCTAANTTTANTGGAAATTACACAT]
consensusID : consensus_11323#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 562 fasta sequence
[TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG-CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCTCCATGCCCCCTAAGTTTAGTGG]
[+] EMBL BF936670 [TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAGGTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCTCCATGCCCCCTAAGTTTAGTGG]
[+] EMBL CD132595 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGCCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATG ]
[+] EMBL CD132590 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTAAG CCCA ]
[+] EMBL CD132585 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAGAAAGCA ]
[+] EMBL CD132576 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACCATG CCCATGTTGTCGCAATCCCAGGACTGGTAGA ]
[+] EMBL CD132575 [ TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCCATG TGTCGCAATCCCAGGACTGG ]
[+] EMBL CD136506 [ tctacgCAGACAATCTTGTATCAAGGATAACATCGCTTCCAGAATCTTTGCCACCATTTAATTGGGAACACTATG CCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCTTGATAGCGAACGCCAAACGTCATGCAGA ]
[+] EMBL CD093753 [ cgcaCGGAGCGAACGGTTTATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATT ]
[+] EMBL CD093776 [ TATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCACTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATT ]
[-] EMBL CD093766 [ ATCGAACGCCGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCATTGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTA ]
consensusID : consensus_11323#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 338 fasta sequence
[TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTTACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGGTAGTGCAGAAAAA]
[+] EMBL CD188169 [TGCCCGAAACATCAATTAGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTTACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATTAATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAGCAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTTCAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAGATGAAAGGTAGTGCAGAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11323#0 TACATACTGAACGGTTAACCTTGGAGTGGGTTTTTTATTTCTAGCGATGACCTCTAAGCG 60
consensus_11323#1 ------------------------------------------------------------
consensus_11323#2 ------------------------------------------------------------
consensus_11323#0 GGTTGTGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATT 120
consensus_11323#1 -----TGGTTTCAGCTGTGAATTGGTCTGAACTGTATTCTAAATGCCCGAAACATCAATT 55
consensus_11323#2 -------------------------------------------TGCCCGAAACATCAATT 17
*****************
consensus_11323#0 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGG----------- 169
consensus_11323#1 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGG----------- 104
consensus_11323#2 AGATCAATTCAGGGAGTTAAAGACAAAGTCAGACAATCTTGTATCAAGGTAAAATAGCTT 77
*************************************************
consensus_11323#0 ---------------------------ATAACATCGCTTCCAGAATCTTTGCCACCAATT 202
consensus_11323#1 ---------------------------ATAACATCGCTTCCAGAATCTTTGCCACCAATT 137
consensus_11323#2 ACTTTACTAGATATTGTTCGTTATAGGATAACATCGCTTCCAGAATCTTTGCCACCAATT 137
*********************************
consensus_11323#0 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 262
consensus_11323#1 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 197
consensus_11323#2 AATTGGGAACACTATGCCCATGTTGTCGCAATCCCAGGACTGGTAGATAAGTTCAAGAAG 197
************************************************************
consensus_11323#0 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTT 322
consensus_11323#1 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACATCGGATGCTATCACTAAAGTT 257
consensus_11323#2 CAATATACAGCTTTGTCAATTGAATATCCTAAAGATACGTCGGATGCTATCACTAAAGTT 257
************************************** *********************
consensus_11323#0 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 382
consensus_11323#1 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 317
consensus_11323#2 CAGAGCCAAGGAAGAATCATGATAGCGAACGCCAAACGTCATGCAGATGCTTGTTTAAAG 317
************************************************************
consensus_11323#0 ATGAAAGGTAGTGCAGAAAAAATGAAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG 442
consensus_11323#1 ATGAAAG-----------------AAAGCTGCTCTAAACAAACTGCCTCCTGTAGATGAG 360
consensus_11323#2 ATGAAAG--------------------GTAGTGCAGAAAAA------------------- 338
******* * * * ** **
consensus_11323#0 GTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC 502
consensus_11323#1 GTTGTGCCAGAAATCATGGTTGCATATTTTGGGCTTCGGAGCGAACGGTTTATCGAACGC 420
consensus_11323#2 ------------------------------------------------------------
consensus_11323#0 CGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCAT 562
consensus_11323#1 CGGAAACCAATATCTTTAGGCAATACGGCCATTTTAAAAAGGTCTGCACCGCCGATTCAT 480
consensus_11323#2 ------------------------------------------------------------
consensus_11323#0 TGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCNATTANTTTGTACCCT 622
consensus_11323#1 TGGGACTTCAATTAACATAAATGACCAGTTCTAGTTACGTATTCGATTAGTTTGTACCCT 540
consensus_11323#2 ------------------------------------------------------------
consensus_11323#0 CCATGCCCCCTAANTTTANTGGAAATTACACAT 655
consensus_11323#1 CCATGCCCCCTAAGTTTAGTGG----------- 562
consensus_11323#2 ---------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||