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Schistosoma mansoni
cluster # 11348 cluster # 11348       Sequences # 55       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11348#0 length = 1188 sequences # 44  
consensus_11348#1 length = 543 sequences # 2  
consensus_11348#2 length = 383 sequences # 1  
consensus_11348#3 length = 300 sequences # 2  
consensus_11348#4 length = 258 sequences # 4  
consensus_11348#5 length = 252 sequences # 2  

consensusID : consensus_11348#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 44
consensus length = 1188
fasta sequence
                              [TTTGTTTTTGGCGTGGAGATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG-CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT-AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG-CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA-AAATGTGGCGATCGT-GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG--TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA-CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGCACAATTACTTCTAAATCCGACAAGGAATAAAATAAAATAATCATATGGTAAAATAAAAAAACAAAAAAAGAATGGCNATGCCATGCAGCTGCATTACCGTACCTCGTGCCGAATTCGGCACGAGCCACCACCCAGTCTCTTGTTTCGACTATACCATAATTCTGATGCGGATAGTCGTGATTTATTATGTGATTTTATACAAAATGGTTCAAATAGTACGACTCAGTCCTCTAGTATTAACAATAAAAACAAGGATGTTCCTAATAAACGTGGACGTAAAAAATAACTTAAATGCAATACTGTCCCGGTTGATTTCTTAAAGCATTTTAAATTTGTGTTTTATCTTTTACTTAATATGTACATCTGTAAACACTAACTGTAATGTTTTCTTTTGCAAGTTGTTTAAAAAAAGATTGATTG]

[-] EMBL CD185122             [TTTGTTTTTGGCGTGGAGATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCGAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD143183             [     TTTTGGCGTGGAGATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGAAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGCGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAGAGTTTCCTTCAGAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD143235             [     TTTTGGCGTGGAGATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT ATAAAAGCC AACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BF936478             [                 GATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACCGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD143182             [                       TAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGGAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGATTATATTCGCGGAGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGCTCGTGTATTGTGGT ACAACAG CAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCCGAA GTACTGTAGTTTGCAATCTTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD143076             [                       TAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAAGGACTGTAGTTTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD181990             [                             TATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD131070             [                                                                   AAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD184678             [                                                                    AGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTGATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD184990             [                                                                    AGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGTTTTTGCTGAACGACATGGTNATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD155811             [                                                                       ACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGAATTTGCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAG AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD195483             [                                                                                                                                  ATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATACCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCCAAAAAGTTTTGCCATCGACTTGCCGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD071145             [                                                                                                                                       TATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGCGCTATGGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD071152             [                                                                                                                                       TATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD071052             [                                                                                                                                       TATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAACCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGGTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCATGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD143072             [                                                                                                                                                             AAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTCCTTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD143188             [                                                                                                                                                                   TTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD157824             [                                                                                                                                                                               GTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCGATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACCGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGNGCTATGGTTGGTCTCGTTGCTGGTGGCGGNCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD137461             [                                                                                                                                                                                      gtccCCA TAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAGAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD098189             [                                                                                                                                                                                                                         ATTCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD199960             [                                                                                                                                                                                                                           TCATACAAGTTGATCAAGCAAACATTTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD098364             [                                                                                                                                                                                                                                      GATCAAGCAAACATTTATCGCGGTCGGAAGGCTTGCATACTGGACAGTTCGTGTGTTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTATGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTAATGTTGGTTCGCTCACAATCCCGACNTAAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD125092             [                                                                                                                                                                                                                                                    TTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD125056             [                                                                                                                                                                                                                                                    TTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD125051             [                                                                                                                                                                                                                                                    TTATCGCGG CGGAAGGCCTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD125041             [                                                                                                                                                                                                                                                    TTATCGCGG CGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD185093             [                                                                                                                                                                                                                                                                       TGCATACTGGACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD122012             [                                                                                                                                                                                                                                                                                 ACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD121988             [                                                                                                                                                                                                                                                                                 ACAGTTCGTGTATTGTGGT AAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATG CCCGAAGGAACTGTAGTTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD158614             [                                                                                                                                                                                                                                                                                                                                                      CCCGAAGGAACTGTAGCTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD158615             [                                                                                                                                                                                                                                                                                                                                                      CCCGAAGGAACTGTAGCTTGCAATCTTGAGGAA AAATGTGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD136578             [                                                                                                                                                                                                                                                                                                                                                                               cTGAGGAA AAATGT GCGATCGTGGGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCNCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD155797             [                                                                                                                                                                                                                                                                                                                                                                               agGAGGAATAAATGTGGCGATCGT AGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD137465             [                                                                                                                                                                                                                                                                                                                                                                                             TGGCGATCGT GGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTG  TCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGCACAATTACTTCTAAATCCGACAAGGAATAAAAT                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD155604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCC                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD136484             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATa                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BG931588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD098200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BG930385             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 aTTGATGG GG GGTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGac                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BG931113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAGAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGa                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BG931370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGag                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BG930823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD060559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTAGACAAACCGATTTTTATAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCA CGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGCACAATTACTTCTAAATCCGACCAGGAATg                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AW017054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGACGTATTCGTGGTACCCGCACAATTACTTTTAAATCCGCCAAGGAATAAAATAAAATAATCATATGGTAAAATAAAAAAACAAAAAAAGAATGGCNATGCCATGCAGCTGCATTACCGTACCTCGTGCCGAATTCGGCACGAGCCACCACCCAGTCTCTTGTTTCGACTATACCATAATTCTGATGCGGATAGTCGTGATTTATTATGTGATTTTATACAAAATGGTTCAAATAGTACGACTCAGTCCTCTAGTATTAACAATAAAAACAAGGATGTTCCTAATAAACGTGGACGTAAAAAATAACTTAAATGCAATACTGTCCCGGTTGATTTCTTAAAGCATTTTAAATTTGTGTTTTATCTTTTACTTAATATGTACATCTGTAAACACTAACTGTAATGTTTTCTTTTGCAAGTTGTTTAAAAAAAGATTGATTG]


>consensus_11348#0 TTTGTTTTTGGCGTGGAGATGGGTAGGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGA GTTTTCAAAGCACATACCAAACATCGTAAAGGAGCTGCTAAGTTGCGTCCAAATGATTTT GCTGAACGACATGGTTATATTCGCGGTGTAGTTAAAGAAATAATTCATGATCCGGGTCGT GGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAA ACATTTATCGCGGCGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCC AAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGC AATCTTGAGGAAAAATGTGGCGATCGTGGGAGGTTAGCTCGTGCAAGTGGAAATTATGCT ACTGTTGTCGCTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCC AAAAAAGTTTTGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGG GTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCAT TGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGGTGGT AACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAA GTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGCACAATTACTTCT AAATCCGACAAGGAATAAAATAAAATAATCATATGGTAAAATAAAAAAACAAAAAAAGAA TGGCNATGCCATGCAGCTGCATTACCGTACCTCGTGCCGAATTCGGCACGAGCCACCACC CAGTCTCTTGTTTCGACTATACCATAATTCTGATGCGGATAGTCGTGATTTATTATGTGA TTTTATACAAAATGGTTCAAATAGTACGACTCAGTCCTCTAGTATTAACAATAAAAACAA GGATGTTCCTAATAAACGTGGACGTAAAAAATAACTTAAATGCAATACTGTCCCGGTTGA TTTCTTAAAGCATTTTAAATTTGTGTTTTATCTTTTACTTAATATGTACATCTGTAAACA CTAACTGTAATGTTTTCTTTTGCAAGTTGTTTAAAAAAAGATTGATTG



consensusID : consensus_11348#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 543
fasta sequence
                              [ACAGGTCAATTTGTTTACTGTGGGAAGAAAGCATCCCTGCAAATCGGAAATATTCTCCCAGTTGGTGTTATGCCTGAAGGTACAATTGTATGTTGTCTTGAGGAGAAATCAGGAGATCGTGGAAAGTTAGCTCGTACATCTGGCAACTATGCCACAGTCATCTCTCATAATCCAGAGACAAAG-AAGACCAGAGTTAAATTGCCTTCTGG-ATCAAAAAAAGTTGTTTTCTCAGCAAACAGAGCCATGATTGGTATTGTTGCAGGTGGTG-GTAGAATTGATAAACCTAT-ATTGAAAGCAGGTAGAGCTTATCACAAGTACAAGGCCAAGAGGAATTGCTGGCCTAAAGTCAGAGGTGTTGCCATGAACCCATGTTGAGCATCCTCACGGTGGTGGTAACCATCAACACATTGGTAAAGCATCTACTGTCAGACGTGATGCCTCTGCTGGTAAAAAGGTTGGTCTTATTGCTGCTCGTCGTACTGGCAAGTTGAGGGGTACCAAGCAAATTGCAAAAGAAAAAGAATAAAGTTATTTGTGATTATG]

[+] EMBL CD146505             [ACAGGTCAATTTGTTTACTGTGGGAAGAAAGCATCCCTGCAAATCGGAAATATTCTCCCAGTTGGTGTTATGCCTGAAGGTACAATTGTATGTTGTCTTGAGGAGAAATCAGGAGATCGTGGAAAGTTAGCTCGTACATCTGGCAACTATGCCACAGTCATCTCTCATAATCCAGAGACAAAG AAGACCAGAGTTAAATTGCCTTCTGG ATCAAAAAAAGTTGTTTTCTCAGCAAACAGAGCCATGATTGGTATTGTTGCAGGTGGTG GTAGAATTGATAAACCTAT ATTGAAAGCAGGTAGAGCTTATCACAAGTACAAGGCCAAGAGGAATTGCTGGCCTAAAGTCAGAGGTGTTGCCATGAACCCATGTTGAGCATCCTCACGGTGGTGGTAACCATCAACACATTGGTAAAGCATCTACTGTCAGACGTGATGCCTCTGCTGGTAAAAAGGTTGGTCTTATTGCTGCTCGTCGT                                                                 ]
[+] EMBL CD146536             [                                                                                                                                                          CAGTCATCTCTCATAATCCAGAGACAAAGTATGACCAGAGTTCTGTTGCCTTCTGGAATCAAAAAAAGTTGCTTTCTCAGCAAACAGAGCCATGATTGGCATTGGTGCAGGTGGCGTGT GAATTGACAAACCTATCATTGAAAGCCGGTAGAGCTTATCACAAGTACAAGGCCTAGAGGACTTGCTGGCCTAAAGTCATAGGTGTTGCCCTGAACCC TGTTGAGCATCCTCACGGTGGTGGTAACCATCAACACATTGGTAAAGCATCTACTGTCAGACGTGATGCCTCTGCTGGTAAAAAGGTTGGTCTTATTGCTGCTCGTCGTACTGGCAAGTTGAGGGGTACCAAGCAAATTGCAAAAGAAAAAGAATAAAGTTATTTGTGATTATG]


>consensus_11348#1 ACAGGTCAATTTGTTTACTGTGGGAAGAAAGCATCCCTGCAAATCGGAAATATTCTCCCA GTTGGTGTTATGCCTGAAGGTACAATTGTATGTTGTCTTGAGGAGAAATCAGGAGATCGT GGAAAGTTAGCTCGTACATCTGGCAACTATGCCACAGTCATCTCTCATAATCCAGAGACA AAGAAGACCAGAGTTAAATTGCCTTCTGGATCAAAAAAAGTTGTTTTCTCAGCAAACAGA GCCATGATTGGTATTGTTGCAGGTGGTGGTAGAATTGATAAACCTATATTGAAAGCAGGT AGAGCTTATCACAAGTACAAGGCCAAGAGGAATTGCTGGCCTAAAGTCAGAGGTGTTGCC ATGAACCCATGTTGAGCATCCTCACGGTGGTGGTAACCATCAACACATTGGTAAAGCATC TACTGTCAGACGTGATGCCTCTGCTGGTAAAAAGGTTGGTCTTATTGCTGCTCGTCGTAC TGGCAAGTTGAGGGGTACCAAGCAAATTGCAAAAGAAAAAGAATAAAGTTATTTGTGATT ATG



consensusID : consensus_11348#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 383
fasta sequence
                              [TTTTGGCGTGGATATGGGTATGGCTATTCGAAGACAGCGTAAGGGTGCCGGAAGAGTTTTCAAAGCACATACCAAACATAGCAAAGGCAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTATTAAAGAAATAATTCATGATCCGGGTCGCGGCGCTACATTAACCAAAGTTTCCTTCATAGATGTCTATTCATACATGTTGATCAAGCAAACATTTACCGTGGCGGAAGCGCTTGCATACTGGACAGTTCATGTATTGTGGTGAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGTAATGCCCGAATGAACTGTCCTTTGCCATCTTGACGAAAAATGTGACGATCGT]

[+] EMBL CD113372             [TTTTGGCGTGGATATGGGTATGGCTATTCGAAGACAGCGTAAGGGTGCCGGAAGAGTTTTCAAAGCACATACCAAACATAGCAAAGGCAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGAACGACATGGTTATATTCGCGGTGTATTAAAGAAATAATTCATGATCCGGGTCGCGGCGCTACATTAACCAAAGTTTCCTTCATAGATGTCTATTCATACATGTTGATCAAGCAAACATTTACCGTGGCGGAAGCGCTTGCATACTGGACAGTTCATGTATTGTGGTGAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGTAATGCCCGAATGAACTGTCCTTTGCCATCTTGACGAAAAATGTGACGATCGT]


>consensus_11348#2 TTTTGGCGTGGATATGGGTATGGCTATTCGAAGACAGCGTAAGGGTGCCGGAAGAGTTTT CAAAGCACATACCAAACATAGCAAAGGCAGCTGCTAAGTTGCGTCCAAATGATTTTGCTG AACGACATGGTTATATTCGCGGTGTATTAAAGAAATAATTCATGATCCGGGTCGCGGCGC TACATTAACCAAAGTTTCCTTCATAGATGTCTATTCATACATGTTGATCAAGCAAACATT TACCGTGGCGGAAGCGCTTGCATACTGGACAGTTCATGTATTGTGGTGAAAAAGCCAAAC TTCAAATTGGCAATATCCTTCCCATAGGTGTAATGCCCGAATGAACTGTCCTTTGCCATC TTGACGAAAAATGTGACGATCGT



consensusID : consensus_11348#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 300
fasta sequence
                              [CACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGCCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACTGCCATCAATAGAAA]

[+] EMBL CD162645             [CACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGCCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACTGCCATCAATAGAAA]
[+] EMBL CD162668             [CACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGCCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCC                  ]


>consensus_11348#3 CACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAA GTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGT CTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGA CCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGCCGATGTCTACCCGACCGCCACC AGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACCCGACTGCCATCAATAGAAA



consensusID : consensus_11348#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 258
fasta sequence
                              [ACTCTCCCACTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGGCGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGGAAAAATGTGGCGATCGTGGGAGGTTA]

[+] EMBL CD155261             [ACTCTCCCACTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGGCGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGGAAAAATGTGGCGATCGTGGGAGGTTA]
[-] EMBL CD116591             [                                                              TTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGGCGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGGAAAAATGTGGCGATCGTGGGAGGTTA]
[+] EMBL CD155143             [                                                                                         GTTGATCAAGCAAACATTTATCGCGGCGGAAGACTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAGACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGGAAAAATGTGGCGATCGTGGGAGGTT ]
[+] EMBL CD059878             [                                                                                                            ATCGTGTTGGAAGGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAATTGGCAATATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGT                                           ]


>consensus_11348#4 ACTCTCCCACTAGTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAA GTTTCCTTCAGAGATGTATATTCATACAAGTTGATCAAGCAAACATTTATCGCGGCGGAA GGCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAATTGGCAAT ATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGGAAAAATGT GGCGATCGTGGGAGGTTA



consensusID : consensus_11348#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 252
fasta sequence
                              [TCGGATAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGGACCCCCCGTCCATCACAATACCATAT]

[-] EMBL BG931204             [TCGGATAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGGACCCCCCGTCCATCACAATACCATAT]
[-] EMBL BG931074             [TCGGGTAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGGTGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGGA                         ]


>consensus_11348#5 TCGGATAGACAAACCAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAG GCATTGTTGGCCCACAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGG TGGTAACCATCAACATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCG CAAAGTTGGTCTAATAGCTGCTAGACGAACTGGACGTATTCGTGGGACCCCCCGTCCATC ACAATACCATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      ------------------------------------------------------------
consensus_11348#1      ACAGGTCAATTTGTTTACTGTGGGAAGAAAGCATCCCTGCAAATCGGAAATATTCTCCCA 60
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      ------------------------------------------------------------
consensus_11348#1      GTTGGTGTTATGCCTGAAGGTACAATTGTATGTTGTCTTGAGGAGAAATCAGGAGATCGT 120
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ----------------------------------------TTTTGGCGTGGATATGGGTA 20
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      -----------------------------------TTTGTTTTTGGCGTGGAGATGGGTA 25
consensus_11348#1      GGAAAGTTAGCTCGTACATCTGGCAACTATGCCACAGTCATCTCTCATAATCCAGAGACA 180
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      TGGCTATTCGAAGACAGCGTAAGGGTGCCGGAAGAGTTTTCAAAGCACATACCAAACATA 80
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      GGGTTATTCGAAGTCAGCGTAAGGGTGCCGGAGGAGTTTTCAAAGCACATACCAAACATC 85
consensus_11348#1      AAGAAGACCAGAGTTAAATTGCCTTCTGGATCAAAAAAAGTTGTTTTCTCAGCAAACAGA 240
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      GCAAAGGCAGCTGCTAAGTTGCGTCCAAATGATTTTGCTGA--ACGACATGGTTATATTC 138
consensus_11348#4      ------------------------------------------------------ACTCTC 6
consensus_11348#0      GTAAAGG-AGCTGCTAAGTTGCGTCCAAATGATTTTGCTGA--ACGACATGGTTATATTC 142
consensus_11348#1      GCCATGATTGGTATTGTTGCAGGTGGTGGTAGAATTGATAA--ACCTATATTGAAAGCAG 298
consensus_11348#5      -----------------------------TCGGATAGACAA--ACCAATTTTAAAAGCTG 29
consensus_11348#3      --------------CACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAA 46
                                                                                   

consensus_11348#2      GCGGTGT--ATTAAAGAAATAATTCATGATCCGGGTCGCGGCGCTACATTAACCAAAGTT 196
consensus_11348#4      CCACTA---GTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTT 63
consensus_11348#0      GCGGTGTA-GTTAAAGAAATAATTCATGATCCGGGTCGTGGCGCTCCATTAGCCAAAGTT 201
consensus_11348#1      GTAGAGCTTATCACAAGTACAAGGC-CAAGAGGAATTGCTGGCCTAAA---GTCAGAGGT 354
consensus_11348#5      GTCGAGCCTATCATAAGTATAAAGC-TAAAAGGCATTGTTGGCCCACA---GTCAGAGGT 85
consensus_11348#3      CCATAGC--ACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGA--GACCAACCAT 102
                                     *     *   *                      *     **    *

consensus_11348#2      TCCTTCATAGATGTCTATT---C--ATACATGTTGATCAAGCAAACATTTAC-CGTGGCG 250
consensus_11348#4      TCCTTCAGAGATGTATATT---C--ATACAAGTTGATCAAGCAAACATTTAT-CGCGGCG 117
consensus_11348#0      TCCTTCAGAGATGTATATT---C--ATACAAGTTGATCAAGCAAACATTTAT-CGCGGCG 255
consensus_11348#1      GTTGCCATGAACCCATGTTGAGC--ATCCTCACGGTGGTGGTAACCATCAACACATTGGT 412
consensus_11348#5      GTTGCCATGAACCC-TGTTGAAC--ATCCTCACGGTGGTGGTAACCATCAACATATAGGT 142
consensus_11348#3      AGCACGGCAAGTCGATGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGC 162
                                      * *    *  *              *  * **   *      *  

consensus_11348#2      GAAGC---GCTTGCATACTGGACAGTTCATGTATTGTGGTGAAAAAGCCAAACTTCAAAT 307
consensus_11348#4      GAAG----GCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAAT 173
consensus_11348#0      GAAG----GCTTGCATACTGGACAGTTCGTGTATTGTGGTAAAAAAGCCAAACTTCAAAT 311
consensus_11348#1      AAAGC---ATCTAC-TGTCAGACGTGATGCCTCTGCTGGTAAAAAGGTTGGTCTTATTGC 468
consensus_11348#5      AAACC---ATCTAC-AATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAATAGC 198
consensus_11348#3      AAGTCGATGTCTACCCGACCGCCACCA-GCAACGAGACCAACCATAGCACGGCAAGCCGA 221
                        *         * *      * *                    *  *     *       

consensus_11348#2      TGGCAAT-ATCCTTCCCATAGGTGTAATGCCCGAATGAACTGTCCTTTGCCATCTTGACG 366
consensus_11348#4      TGGCAAT-ATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGG 232
consensus_11348#0      TGGCAAT-ATCCTTCCCATAGGTGCAATGCCCGAAGGAACTGTAGTTTGCAATCTTGAGG 370
consensus_11348#1      TGCTCGTCGTACTGGC--AAGTTGAGGGGTACCAAGCAAAT-TGCAAAAGAAAAAGAATA 525
consensus_11348#5      TGCTAGACGAACTGGACGTATTCGTGGGACCCCCCGTCCAT-CACAATACCATAT----- 252
consensus_11348#3      TGTCTACCCGACCGCCACCAGCAACGAGACCAACCATAGCACGGCAAGTCGATGTCTACC 281
                       **         *       *                               *        

consensus_11348#2      AAAAATGTGACGATCGT------------------------------------------- 383
consensus_11348#4      AAAAATGTGGCGATCGTGGGAGGTTA---------------------------------- 258
consensus_11348#0      AAAAATGTGGCGATCGTGGGAGGTTAGCTCGTGCAAGTGGAAATTATGCTACTGTTGTCG 430
consensus_11348#1      AAGTTATTTGTGATTATG------------------------------------------ 543
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      CGACTGCCATCAATAGAAA----------------------------------------- 300
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      CTCACAATCCCGACACTAAACGAACTCGTGTCAAACTGCCATCAGGTGCCAAAAAAGTTT 490
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      TGCCATCGACTTGCCGTGCTATGGTTGGTCTCGTTGCTGGTGGCGGTCGGGTAGACAAAC 550
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      CAATTTTAAAAGCTGGTCGAGCCTATCATAAGTATAAAGCTAAAAGGCATTGTTGGCCCA 610
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      CAGTCAGAGGTGTTGCCATGAACCCTGTTGAACATCCTCACGGTGGTGGTAACCATCAAC 670
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      ATATAGGTAAACCATCTACAATTCGACGTGATGCATCTCATGGTCGCAAAGTTGGTCTAA 730
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      TAGCTGCTAGACGAACTGGACGTATTCGTGGTACCCGCACAATTACTTCTAAATCCGACA 790
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      AGGAATAAAATAAAATAATCATATGGTAAAATAAAAAAACAAAAAAAGAATGGCNATGCC 850
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      ATGCAGCTGCATTACCGTACCTCGTGCCGAATTCGGCACGAGCCACCACCCAGTCTCTTG 910
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      TTTCGACTATACCATAATTCTGATGCGGATAGTCGTGATTTATTATGTGATTTTATACAA 970
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      AATGGTTCAAATAGTACGACTCAGTCCTCTAGTATTAACAATAAAAACAAGGATGTTCCT 1030
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      AATAAACGTGGACGTAAAAAATAACTTAAATGCAATACTGTCCCGGTTGATTTCTTAAAG 1090
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      ------------------------------------------------------------
consensus_11348#4      ------------------------------------------------------------
consensus_11348#0      CATTTTAAATTTGTGTTTTATCTTTTACTTAATATGTACATCTGTAAACACTAACTGTAA 1150
consensus_11348#1      ------------------------------------------------------------
consensus_11348#5      ------------------------------------------------------------
consensus_11348#3      ------------------------------------------------------------
                                                                                   

consensus_11348#2      --------------------------------------
consensus_11348#4      --------------------------------------
consensus_11348#0      TGTTTTCTTTTGCAAGTTGTTTAAAAAAAGATTGATTG 1188
consensus_11348#1      --------------------------------------
consensus_11348#5      --------------------------------------
consensus_11348#3      --------------------------------------
                                                             




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)