These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11372#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 25 consensus length = 1164 fasta sequence [CATTTCTATCTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG-AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA-ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATC-AATTTGTTGCAGAGACTTTCATTGTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCAACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATATCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTATTTTTTAGATGAATATTACCAACAACATGGACGTGTGATAGCTATGCTTATTTGTTTCATTTTTTTTATTATTTTAACGAAGAACCTTTTTTGTATTGAGTATTATGCATAGTCATATATC] [+] EMBL CD094817 [CATTTCTATCTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGA ] [-] EMBL CD094464 [ ATTTCTATCTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAA ] [-] EMBL CD159357 [ TGGTGAGTCAACTCTCCCCCCCAAAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [+] EMBL CD159183 [ CTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGTGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGCTTGCCTTAGGAAATGGAGTTTCATTTGATGAGATATTAT AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAACTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD120920 [ CTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD120984 [ CTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCGCAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD121059 [ CTGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD121105 [ CTGTCACCACCAAACTATGAGAGTCTGTCAACGGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCGATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [-] EMBL CD159121 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD121703 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTCTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAAACACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159325 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTCCCAGCCAATCATATATCAATCTTGATAGTGATCAATTTAGATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCAGTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159234 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAACGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAACCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159304 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159444 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159158 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159143 [ TGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159396 [ cGTCACCACCAAACTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [+] EMBL AI976131 [ GAAATGGAGTTGCAGGTGATGAGATATTAG AAAAAAAAATTAGGAAAATGAATCACCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTA ATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGCAGAAACTGTGTGCCCTGCAGACGAGCATTCGAAGAGTTTCAAGTTGCATCTGCTTCTTGGAAATATTCTAAGCAGCATGATGATCGGCTGTTCTTCGAGATTGCGGACTTTGACAAGGCACCTGGTGTGTTTGAGTTACTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAGTCATGCGATGGATAACGGGAATTACGCATATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTA ] [+] EMBL CD078776 [ CTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCT TTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATCNAATT ] [+] EMBL CD150478 [ CAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATCCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACGTCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATC ] [-] EMBL CD062752 [ TATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGAAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACATAAAGGAAATATAAAGCAATCGGATTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTATGGGCAAGTGT ] [+] EMBL CD128630 [ TTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTAGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTGATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTG ] [+] EMBL CD112797 [ CTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGGAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTACGTCGAATCAACTTGGACTGTTTATATAATC ] [-] EMBL CD163690 [ AGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATC AATTTGTTGCAGAGACTTTCATTGTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCAACTACTGA ] [-] EMBL CD073236 [ GCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGATTCGCT TTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATC AATTTGTTGCAGAGACTTTCATTGTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTTTCATGACTGAAGTTAGTTCAACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATATCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTATTTTTTAGATGAATATTACCAACAACATGGACGTGTGATAGCTATGCTTATTTGTTTCATTTTTTTTATTATTTTAACGAAGAACCTTTTTTGTATTGAGTATTATGCATAGTCATATATC] consensusID : consensus_11372#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1151 fasta sequence [CTCGCGGCCAAGATTCGGCACGAGGTGCCAGCCTATTCCTGTG-CTTGGTGAGTAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCCAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTCTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGGTAAATATCTTTCACTTTTAAATTTCTCAGATTCGCTTATTCCGACCTCCGAATTATGCCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTCATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATCAATTTGTTGCAGAGACTTTCATTGTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCAACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATATCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTTATTTTTAGATGAAT] [+] EMBL CD077690 [CTCGCGGCCAAGATTCGGCACGAGGTGCCAGCCTATTCCTGTG CTTGGTGAGTAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGGAAATGAATCAGCTTACTACCAGCC ] [+] EMBL CD121039 [ aCTGTGCCTTGGTGAGCAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTCCGCAACTCATCCGCCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD159213 [ CTGTCACCACCAAACGTACGTGTCTTGGTGCTCTTTTCGCAACTCATTCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCACGGGGATGGTTTTTCTCTTTGATTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGTCTAGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAAAAACTGTGT ] [+] EMBL CD121737 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [-] EMBL CD159177 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTAGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159436 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD120876 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159176 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGACATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCAATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159229 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTAGTTTGTTTGTCCTCGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159266 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159373 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159351 [ cGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD118430 [ GTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTANAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCCAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTCTTCCGCCGAAGCAATCATGCGATGGATAACGGGAATTACGCAAATCCAGGTAAATATCTTTCACTTTTAAATTTCTCAGATTCGCTTATTCCGACCTCCGAATTATGCCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCG ] [+] EMBL CD149962 [ GATAACGGGAATTACGCAAATCCAGGTAAATATCTTTCACTTTTAAATTTCTCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGCGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTCATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGAGAAATTAAGGCCTTTATATACGATGGTTCTGACTATCAATTTGTTGCAGAGACTTTCATTGTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCAACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATATCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTTATTTTTAGATGAAT] consensusID : consensus_11372#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 837 fasta sequence [TGACTTATTTACCTTGCTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGAGGCTGCGGGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCCATCGATCACA] [-] EMBL CD133412 [TGACTTATTTACCTTGCCGACTCCTGTGCTTGGTGAGTAAACTGTCACCAACAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCGTCCGCCCTTAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATC ] [+] EMBL BF936965 [ CTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCTTGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAACGGGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGAGGCTGCGGGTTCTGTACTT ] [+] EMBL AI975780 [ CTGATTCCTGTGCTTGGTGAGTAAACTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCACCTCATTCGCCCTTAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTGACTTCTCTTTGCCAGGTTGTACTCGTTTGCCTTAAGAAATGGAGTTTCACTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCATCTTACTACCAGCCGATCATATATCAATCTTGATACCGA ] [+] EMBL CD159211 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTAAGGAAATGGAGTTTCAGTTGGTGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD159273 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCCTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD159401 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD121000 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATACGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD121113 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [+] EMBL CD159151 [ CTGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGCTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGT ] [-] EMBL CD121072 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159393 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159246 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTCGCCTTAGGAGATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159379 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCAAATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159316 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAG AAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATACCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD121112 [ TGTCACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGAGGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCATATATAAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [-] EMBL CD159374 [ tcgttagtCAACTCACCCGCCCTAAATATGAGAGTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCCTTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGACATTAGAAAAAAAAATTAGGAAAATGAATCAGCTTACTACCAGCCAATCGTATATCAATCTTGATACCGATCAATTTAATCTTCTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCTAGTAGAAACTGTGTG ] [+] EMBL BG931832 [ cTCTTCGCGATTGCGGACTTTGACAAGGCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCACCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCCGAAGCAATCATGCGATGGATAAC GGGAATTACGCAAATCCAGATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTGCCCTTTTTATGTCCCTTGGGGCTGC GGTTCTGTACTTTCGTCGAATCAACTTGGACTGTTTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCTGGGCAAGTGTACAATCATATTCGTGGACCTCCCATCGATCACA] consensusID : consensus_11372#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 540 fasta sequence [ATCATGGATGTGCTGAATAATGGAAAAAACACATCTTACAATTTCTCCATTAGGAGGTGGCGCATGAAAAAGCGGAGGTCCACGAATATGATTGTACACTTGCCCAGAAATAGAACAAAAAATAACACCCTACAATAAAAAAGTACTCATTAAGTGACACTGTACATACTGATCATTGAGAAATAACTTACACTCAAGTCATTAATGAACAAAATGTTAGCGATTATTCTATTTGCAAAATCTAGGCTTGAACTAGGATTATAAGTAGA-TAATAAAAAATAGGGAGCTAGGGGAAATAGTTTATTGGGTCAGGGTGTCATTACTCTGGAAAAAAGTAAGAATATAGGAAATTAAGAAAACAAGACAAACTAACACTAATGCTAATAAGATTAATTAAGAACAAAGAATTAAAAAAGCGGAAGGTATGTTAAATATAAATACATTTCTTAAATATACCGACCGAGCGACGTACGTATTTAACTAACACGAGACCTATTATTGTCGAATGACTAAGATACATCAATAATGATTGTTACAGAA] [+] EMBL CD177704 [ATCATGGATGTGCTGAATAATGGAAAAAACACATCTTACAATTTCTCCATTAGGAGGTGGCGCATGAAAAAGCGGAGGTCCACGAATATGATTGTACACTTGCCCAGAAATAGAACAAAAAATAACACCCTACAATAAAAAAGTACTCATTAAGTGACACTGTACATACTGATCATTGAGAAATAACTTACACTCAAGTCATTAATGAACAAAATGTTAGCGATTATTCTATTTGCAAAATCTAGGCTTGAACTAGGATTATAAGTAGATTAATAAAAAATAGGGAGCTAGGGGAAATAGTTAATTGGGTCAGGGTGTCATTA ] [+] EMBL CD177722 [ AAAAACACATCTTACAATTTCTCCATTAGGAGGTGGCGCATGAAAAAGCGGAGGTCCACGAATATGATTGTACACTTGCCCAGAAATAGAACAAAAAATAACACCCTACAATAAAAAAGTACTCATTAAGTGACACTGTACATACTGATCATTGAG AATAACTTACACTCAAGTCATTAATGAACAAAATGTTAGCGATTATTCTATTTGCAAAATCTAGGCTTGAACTAGGATTATAAGTAGA TAATAAAAAATAGGGAGCTAGGGGAAATAGTTTATTGGGTCAGGGTGTCATTACTCTGGAAAAA ] [+] EMBL CD165758 [ TTATAAGTAGA TAATAAAAAATAGGGAGCTAGGGGAAATAGTTTATTGGGTCAGGGTGTCATTACTCTGGAAAAAAGTAAGAATATAGGAAATTAAGAAAACAAGACAAACTAACACTAATGCTAATAAGATTAATTAAGAACAAAGAATTAAAAAAGCGGAAGGTATGTTAAATATAAATACATTTCTTAAATATACCGACCGAGCGACGTACGTATTTAACTAACACGAGACCTATTATTGTCGAATGACTAAGATACATCAATAATGATTGTTACAGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11372#1 CTCGCGGCCAAGATTCGGCACGAGGTGCCAGCCTATTCCTGTGCTTGGTGAGTAAACTGT 60 consensus_11372#2 ---------------TGACTTATTTACCTTGCTGATTCCTGTGCTTGGTGAGTAAACTGT 45 consensus_11372#0 ----------------------CATTTCTATCTGATTCCTGTGCTTGGTGAGTAAACTGT 38 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 CACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCACCCTTAGTATGAGA 120 consensus_11372#2 CACCACCAAACGTACGTGTCTTCGTGCTCTTTTCGCAACTCATCCGCCCTTAATATGAGA 105 consensus_11372#0 CACCACCAAAC------------------------------------------TATGAGA 56 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 GTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCC 180 consensus_11372#2 GGCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCC 165 consensus_11372#0 GTCTGTCAACAGATGGACATCACATTCTCGGGGATGTTTTTTCTCTTTGTTTGTTTGTCC 116 consensus_11372#3 -----------------------------------------------ATCATGGATGTGC 13 ** *** * consensus_11372#1 TTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAA 240 consensus_11372#2 TTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAA 225 consensus_11372#0 TTGTTTGCCTTAGGAAATGGAGTTTCAGTTGATGAGATATTAGAAAAAAAAATTAGGAAA 176 consensus_11372#3 TGAATAATGGAAAAAACACATCTTACAATTTCTC---CATTAGGAGGTGGCGC-ATGAAA 69 * * * ** ** ** ** * ***** * * **** consensus_11372#1 ATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTT 300 consensus_11372#2 ATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTT 285 consensus_11372#0 ATGAATCAGCTTACTACCAGCCAATCATATATCAATCTTGATACCGATCAATTTAATCTT 236 consensus_11372#3 AAGCGGAGGTCCACGAATA--TGATTGTACACTTGCCCAGAAATAGAACAAAA-AATAAC 126 * * * ** * * ** ** * * ** * ** *** *** consensus_11372#1 CTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCT 360 consensus_11372#2 CTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCT 345 consensus_11372#0 CTGCTAAAATCACAGCCTCGGAATTACTCAGTTATATTACTTCTGACTGCTTTAAGTTCT 296 consensus_11372#3 ACCCTACAATAAAA-------AAGTACTCA-TTAAGTGACA-CTGTACATACTGATCATT 177 *** *** * * ** ****** *** * ** *** * * * consensus_11372#1 AGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCT 420 consensus_11372#2 AGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCT 405 consensus_11372#0 AGTAGAAACTGTGTGCCCTGCAGACAAGCATTCGAAGAGTTTCAAGTTGTATCTACTTCT 356 consensus_11372#3 GAGAAATAACTTACACTCAAGTCATTAATGAACAAAATGTTAGCGATTAT-TCTATTTGC 236 * * * * * * * * * ** *** ** * **** ** consensus_11372#1 TGGAAATATTCCAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAG 480 consensus_11372#2 TGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAG 465 consensus_11372#0 TGGAAATATTCTAAGCAGCATGATGATCGGTTGTTCTTCGCGATTGCGGACTTTGACAAG 416 consensus_11372#3 AAAATCTAGGCTTGA-ACTAGGATTATAAGTAGATAATAAAAAATAGGGAGCT----AGG 291 * ** * * * *** ** ** * * * * * *** * * * consensus_11372#1 GCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCA 540 consensus_11372#2 GCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCA 525 consensus_11372#0 GCACCTGGTGTCTTTGAGTTTCTACATCAAGAAACTGCTCCCGCGATTGTGTATGTATCA 476 consensus_11372#3 GGAAATAGT-TTATTGGGTCAGGGTGTCA-----TTACTCT-GGAAAAAAGTAAGAAT-- 342 * * * ** * *** ** *** * *** * * *** * ** consensus_11372#1 CCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTCTTCCGCC 600 consensus_11372#2 CCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCC 585 consensus_11372#0 CCTAAAGGAAATATAAAGCAATCGGACTACATGGATATTACGATTAGTGGGTTTTCCGCC 536 consensus_11372#3 ---ATAGGAAAT-TAAGAAAACAAGAC-AAACTAACACTAATGCTAATAAGATTAATTAA 397 * ******* *** ** *** * * * * ** ** * * * consensus_11372#1 GAAGCAATCATGCGATGGATAACGGG-AATTACGC-AAATCCAGGTAAATATCTTTCACT 658 consensus_11372#2 GAAGCAATCATGCGATGGATAACGGGGAATTACGC-AAATCCAG---------------- 628 consensus_11372#0 GAAGCAATCATGCGATGGATAACGGG-AATTACGC-AAATCCAG---------------- 578 consensus_11372#3 GAACAAAGAAT----TAAAAAAGCGGAAGGTATGTTAAATATAA---------------- 437 *** ** ** * * ** ** * ** * **** * consensus_11372#1 TTTAAATTTCTCAGATTCGCTTATTCCGACCTCCGAATTATGCCGGAACCATGCTACTTG 718 consensus_11372#2 --------------ATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTG 674 consensus_11372#0 --------------ATTCGCTTATTCCGACCTCCAAATTATACCGGAACCATGCTACTTG 624 consensus_11372#3 ----------------------ATAC--ATTTCTTAAATATACCG--ACCGAGCGACGTA 471 ** * * ** ** *** *** *** ** ** * consensus_11372#1 CCCTTTTTATGTCCCTTGGGGCTGCGG-TTCTGTACTTTCGTCGAATCAACTTGGACTGT 777 consensus_11372#2 CCCTTTTTATGTCCCTTGAGGCTGCGGGTTCTGTACTTTCGTCGAATCAACTTGGACTGT 734 consensus_11372#0 CCCTTTTTATGTCCCTTGGGGCTGCGG-TTCTGTACTTTCGTCGAATCAACTTGGACTGT 683 consensus_11372#3 CG-TATTTAACTAACACGAGACC----------TATTATTGTCGAAT-GACTAAGA-TAC 518 * * **** * * * * * ** * * ******* *** ** * consensus_11372#1 TTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTCATTTTTTGTTCTATTTCT 837 consensus_11372#2 TTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCT 794 consensus_11372#0 TTATATAATCGTTCACTATGGAGTGCAATATCATTGGGTGTTATTTTTTGTTCTATTTCT 743 consensus_11372#3 ATCAATAAT-GATTGTTACAGAA------------------------------------- 540 * ***** * * ** ** consensus_11372#1 GGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGA 897 consensus_11372#2 GGGCAAGTGTACAATCATATTCGTGGACCTCCCATCGATCACA----------------- 837 consensus_11372#0 GGGCAAGTGTACAATCATATTCGTGGACCTCCGCTTTTTCATGCGCCACCTCCTAATGGA 803 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 GAAATTAAGGCCTTTATATACGATGGTTCTGACTATCAATTTGTTGCAGAGACTTTCATT 957 consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 GAAATTAAGGCCTTTATATACGATGGTTCTGACTATCAATTTGTTGCAGAGACTTTCATT 863 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 GTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCA 1017 consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 GTGATGGTTTTATATATTGGTTGTTCAGGTGGAATTCTTCTCATGACTGAAGTTAGTTCA 923 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 ACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATA 1077 consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 ACTACTGATCCAACAAAGCGGAAAGTTTACACAATATCAGGAATAGCCCTATTTATAATA 983 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 TCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTT 1137 consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 TCTATCCACTTTATACTATCAGTCTTTCGAAGGAAATATCACGGCTATCCATATGGATTA 1043 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 ATTTTTAGATGAAT---------------------------------------------- 1151 consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 TTTTTTAGATGAATATTACCAACAACATGGACGTGTGATAGCTATGCTTATTTGTTTCAT 1103 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 ------------------------------------------------------------ consensus_11372#2 ------------------------------------------------------------ consensus_11372#0 TTTTTTTATTATTTTAACGAAGAACCTTTTTTGTATTGAGTATTATGCATAGTCATATAT 1163 consensus_11372#3 ------------------------------------------------------------ consensus_11372#1 - consensus_11372#2 - consensus_11372#0 C 1164 consensus_11372#3 - |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||