These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11385#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 61 consensus length = 602 fasta sequence [CATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG-CCTCTTCGTTCGA-CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT-CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC-CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT-CACCGGCCTCTTTCCTTAT-CTTCTTGAC-AACTGGCTCGTCATTACCGTTCTTAGCTTCATG-ATCTGCAACATCTTTGGCATCCACAGAC-TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG-TGTG-CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAGCCAAATTNTGGCCCTGGAGG] [+] EMBL CD073927 [CATCTGTTATATTATATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTC ] [-] EMBL CD079667 [ ATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCACCTCGTGCCAAATTNTGGCCCTGGAGG] [-] EMBL CD062870 [ AGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAATAAGAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCATGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACT ] [+] EMBL CD061395 [ CGGGTTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCG TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGACAAACTGGCTCGTCATTACCGTACTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGG ] [+] EMBL CD178027 [ TTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCG TTTTCGTTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ] [+] EMBL BG932747 [ acTAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAG ] [-] EMBL BG931073 [ tcAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTTGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGAg ] [-] EMBL BG930610 [ tcAGAATAAAAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGAt ] [+] EMBL CD133678 [ AAATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CACCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCC ] [-] EMBL CD189794 [ AATCGATAAAAATGTTACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACCGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCAT ] [+] EMBL CD193420 [ TACAAAAAGACATAAATGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG ] [+] EMBL CD122184 [ TGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ] [+] EMBL CD122161 [ TGCCTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATC ] [+] EMBL CD190062 [ tgtcgTGGAGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTAGACTGAAGGCGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTACATTCTGATGTA CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ] [+] EMBL CD062844 [ AGTGCATAAAAATGCCGAAGTTTAATCACTGGACCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [+] EMBL CD062859 [ AGTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [+] EMBL CD062872 [ AGTGCATAAAAATGCCGCAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGGCATGTTCGCCGTTAC ] [+] EMBL CD062955 [ GTGCATAAAAATGCCGAAGTTTAATCACTGGACCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [+] EMBL CD062880 [ GTGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [-] EMBL CD062879 [ TGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTGACT ] [-] EMBL CD062892 [ TGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACT ] [+] EMBL CD062949 [ gaaGCATAAAAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [+] EMBL CD189909 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTNTCAAAGAC ] [+] EMBL CD190054 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCGGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGTCCACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGACTTTCCTTTTCAACa ] [+] EMBL CD189930 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGAa ] [+] EMBL CD189688 [ AAATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCATCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCCTAGCTTCATGNATCTGC ACATCTTTGGCA CCACAGAC TTCCTTTTCAACTCTCNCATTTTCGACTCAACGGGAGTGACCTCA ] [-] EMBL CD188621 [ AATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACA ] [-] EMBL CD133331 [ AATGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATCAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ] [-] EMBL CD144667 [ TGCCGAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ] [-] EMBL CD144560 [ TGCGAAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCC TTTCTGATTCGGAATCGACCCCATCGTCTGA TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTT ] [-] EMBL CD062873 [ CGAAGTTTAATCACTGG CCTCTTCGTTCAAGCTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGAC ] [+] EMBL CD062862 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCCGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTAC ] [+] EMBL CD062864 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTACACCGACATGTTCGCCGCTAC ] [+] EMBL CD062881 [ GAAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGAT ] [-] EMBL CD126044 [ AAGTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTac ] [-] EMBL CD069516 [ GTTTAATCACTGG CCTCTTCGTTCGA CTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGATGTGCCAGCGACAGACTCCATCTGAGACAGGTT ] [+] EMBL CD062841 [ TTCGTTCGA CTACTTGTCGACTGAAGGAGCATAACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTATTCATCCTGATGTT CACCGACATGTTCGCCGTTAC ] [-] EMBL CD145924 [ TCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTC ] [+] EMBL CD190439 [ CCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGNCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCA ] [-] EMBL CD190403 [ CTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC ] [-] EMBL CD188098 [ CTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCGGCCACCGCCGATCTACTCTCCGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGC ] [+] EMBL CD185053 [ CGGACCCATCGTCTGATTTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ] [-] EMBL CD201542 [ GACCCATCG TTTTCATTCTGATGTT CACCGACATGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAG ] [+] EMBL CD197992 [ GTCTGATTTTTCATTCTGATGTT CACCGACACGTTCGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTT ] [+] EMBL CD193575 [ GTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGNGCGTGCACCAACGTTTTTCAAGAC ] [-] EMBL CD130789 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGC ] [-] EMBL CD133948 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTG ] [-] EMBL CD190852 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGAC ] [-] EMBL CD190897 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGAC ] [-] EMBL CD133939 [ TCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGC ] [-] EMBL CD144280 [ TAGTGCC TTGGTGTC TGTGAGGCATCG CTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ] [-] EMBL CD144252 [ TAGTGCCTTTGGTGTCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCA ] [+] EMBL CD194509 [ TCTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTTAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTAT ] [-] EMBL CD194510 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ] [-] EMBL CD194403 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ] [-] EMBL CD194537 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ] [-] EMBL CD194407 [ CTTGTGAGGCATCGTCTTCGGTAC CGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCTCCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCACCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATT ] [-] EMBL CD132802 [ GCATCGTC TCGGGGCGCGTCGTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGTGAGCCTTTTCGTCCTCACCGGAGT CACCGGCCTCTTTCCTTATAAAAAAAAAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGga ] [-] EMBL CD130143 [ ACTCTCTGGACTGTGAGCCTTTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGA ] [-] EMBL CD142008 [ TTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAaat ] [-] EMBL CD142041 [ TTTCGTCTTCATCGGTGT CACCGGCCTCTTTCCTTAT CTTCTTGAC AACTGGCTCGTCATTACCGTTCTTAGCTTCATG ATCTGCAACATCTTTGGCATCCACAGAC TTCCTTTTCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTG TGTG CAGCGACAGACTCCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACA ] consensusID : consensus_11385#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 451 fasta sequence [AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGGAGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTGCCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACCTTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTCAAAAGCCTCCCACAAAAAGGCCGCGCGTGACCGGTTTCAGGCAATTGTACTTTGGGCTCTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCCACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGTAACAGCACACGAGAACAATTTGGTCACATTCAAA] [+] EMBL CD128183 [AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGGAGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTGCCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACCTTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTCAAAAGCCTCCCACAAAAAGGCCGCGCGTGACCGGTTTCAGGCAATTGTACTTTGGGCTCTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCCACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGTAACAGCACACGAGAACAATTTGGTCACATTCAAA] consensusID : consensus_11385#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 165 fasta sequence [TGTCTGGAAGAGCGAGCCATATGTCTGGCATGCATAAAAATGCCGAAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTTTTCATTCTGATGTTCACCGACATGTTGGCCGTTAC] [+] EMBL CD062874 [TGTCTGGAAGAGCGAGCCATATGTCTGGCATGCATAAAAATGCCGAAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTTCTGATTCGGAATCGGACCCATCGTTTTCATTCTGATGTTCACCGACATGTTGGCCGTTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11385#0 CATCTGTTATATTAGATATAAGTGAATAATAAACTTGTGCAAAAGCTGCCGGGTTAGAAT 60 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 -AACGGTAAGACTAAAAGCAGCAACTCAAGGTCTGAGGGCGAAGTCGTACTGCTGACTGG 59 consensus_11385#0 AAAAATCGATAAAAATGTTACAAAAAGACA--TAAATGCCTGGAGTGCATAAAAATGCCG 118 consensus_11385#2 -------------TGTCTGGAAGAGCGAGC--CATATGTCTGGCATGCATAAAAATGCCG 45 consensus_11385#1 AGAGGGGTTTGACAGCAGTAAGGTGTTTCCTTCGGACAACCAGCATCTGCAACAATGCTG 119 * * * * ** ***** * consensus_11385#0 AAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTT 178 consensus_11385#2 AAGTTTAATCACTGGCCTCTTCGTTCGACTCCTTGTCGACTGAAGGTGCATCACCCTTTT 105 consensus_11385#1 CCTTCTCACAAGGAGGGAGGCGGTTAGAAAAGATCAACCCTAAAAATGTCACGCCTCACC 179 * * * * * *** ** * ** ** ** * ** consensus_11385#0 CTGATTCG-GAATCGGACCCATCGTCTGATTTTTCATTCTGATGTTCA--CCGACATGTT 235 consensus_11385#2 CTGATTCG-GAATCGGACCCATCGT------TTTCATTCTGATGTTCA--CCGACATGTT 156 consensus_11385#1 TTAGCTCACGGATTTCCGTCTCCGGAGGTAAGACCCTTTGAAGAACGAAGCTAATACGTC 239 * ** * ** * ** * ** * * * * * ** consensus_11385#0 CGCCGTTACTGCCGTTTACATGTTCGCTTGTCCCATTAGTGCCTTTGGTGTCTTGTGAGG 295 consensus_11385#2 GGCCGTTAC--------------------------------------------------- 165 consensus_11385#1 AAAAGCCTCCCACAAAAAGGC-CGCGCGTGACCGGTTTCAGGCAATTGTACTTTG-GGCT 297 * * consensus_11385#0 CATCGTCTTCGGTACCGTCTTCATCCAACTCAGCCACCGCCGATCTACTCTCTGGACTGT 355 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 CTGCGGTCACGCTCCCAGGTCGTTAAGATCAACATTAATCCAACTTCCTTTTCAGGTCCC 357 consensus_11385#0 GAGCCTTTTCGTCTTCATCGGTGTCACCGGCCTCTTTCCTTATCTTCTTGACAACTGGCT 415 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 ACAAGAAATACCCTTCCACGGTATGGGCAGCCGGGAAGTGATATTAGCCCTCATACACGT 417 consensus_11385#0 CGTCATTACCGTTCTTAGCTTCATGATCTGCAACATCTTTGGCATCCACAGACTTCCTTT 475 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 AACAGCACACGAGAACAATTTGGTCACATTCAAA-------------------------- 451 consensus_11385#0 TCAACTCTTCAATTTTCGACTCAACGTGAGTGACCTCATCTTTGTGTGCAGCGACAGACT 535 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 ------------------------------------------------------------ consensus_11385#0 CCATCTGAGACAGGTTATTGGGCGTGCACCAACGTTTTCAAAGACAGCCAAATTNTGGCC 595 consensus_11385#2 ------------------------------------------------------------ consensus_11385#1 ------------------------------------------------------------ consensus_11385#0 CTGGAGG 602 consensus_11385#2 ------- consensus_11385#1 ------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||