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Schistosoma mansoni
cluster # 11391 cluster # 11391       Sequences # 64       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11391#0 length = 689 sequences # 53  
consensus_11391#1 length = 667 sequences # 3  
consensus_11391#2 length = 401 sequences # 1  
consensus_11391#3 length = 327 sequences # 6  
consensus_11391#4 length = 248 sequences # 1  

consensusID : consensus_11391#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 53
consensus length = 689
fasta sequence
                              [TTTTTTTTTTTTTTTTGCTAAATTATCCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG-TAAGGATT-AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG-GTGC-TT-GGTTGA--CCTGGATGTGTTTGATGTACAAACGACTGGCT-TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA-TT-TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC-TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTCCCGCTCCCAAGA]

[+] EMBL AI395482             [TTTTTTTTTTTTTTTTGCTAAATTATCCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGGATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGGGCAGACTTTTT                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD076780             [                         TCCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTG                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD146707             [                                        TTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAA                                                                                                                                                                                                           ]
[+] EMBL CD146705             [                                        TTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TATTAAGTAA                                                                                                                                                                                                           ]
[+] EMBL CD146982             [                                        TTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGAC                                                                                                                                                                                                                          ]
[+] EMBL CD146798             [                                        TTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTCCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAG                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD130562             [                                                                                                       TTCTTCTTTGCTAACTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGNTAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTG                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD184298             [                                                                                                                     CTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGGCTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCc                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD130763             [                                                                                                                     CTGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATG TAAGGATT AATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGT                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD130612             [                                                                                                                      TGTGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATAACTTCTACATGGCATGGTGAACACATG TAAGGATTAAATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGAAGCGTTT                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD182248             [                                                                                                                                                                                                                                         ACGACGTCGCATTTTA  GTGC TT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCTCTC CCTCCNTTTATGTCTTTGTA ACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGAC TTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182278             [                                                                                                                                                                                                                                          CGACGTCGCATTTTA  GTGC TC GGTTGA  CCTGCATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACATTT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[+] EMBL CD182265             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAAATATCTCTTTCTTCTCAATGACA TTNTTTTAGGTAAGGTTGTGCTCGCTGAAAAGTAATTCCTTTAATTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCA GTATGGGGATCTGGC TTTGCAAGTTTTA CTTCATC                                                                                            ]
[+] EMBL CD182296             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACAACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTT                                                                                                                                                                                                                 ]
[+] EMBL CD182282             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTC                                                                                                                                                                                                                                ]
[+] EMBL CD182333             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTGGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGCGCAGAAGCTGAAGCAGCCTTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTa                                                                                                                                                                                                                                ]
[+] EMBL CD182331             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTNTGAAATGAGTCCTCAGGTATGGGATTCTTGCTTTTGC AGTTNTACCTTCATCC                                                                                           ]
[+] EMBL CD182332             [                                                                                                                                                                                                                                           GACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTA                                                                                                                                                                                                                                                                ]
[-] EMBL CD182204             [                                                                                                                                                                                                                                            ACGTCGCATNTTA  GTGCTTT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGTAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182252             [                                                                                                                                                                                                                                            ACGTCGCATNTTAG GCGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182249             [                                                                                                                                                                                                                                            ACGTCGCATNTTAG GTGC TT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGCTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182276             [                                                                                                                                                                                                                                            ACGTCGCA TTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATCGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCGCACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD093527             [                                                                                                                                                                                                                                            ACGTCGCATTTAAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTGGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD125176             [                                                                                                                                                                                                                                            ACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGAC TTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCCTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAG TTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182263             [                                                                                                                                                                                                                                            ACGTCGCA TTTAGTNNGC TT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCATNTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTACAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182209             [                                                                                                                                                                                                                                            ACGTCGCATTTTA  GTGC TTNGGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCTCTC CCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCGCAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182309             [                                                                                                                                                                                                                                            ACGTCGCATTTTAG GTGC  T GG TGACCCCTGNATGTGTTTGATGTACAAACGACTGGCTCTC CCTCCTTNTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182275             [                                                                                                                                                                                                                                            ACGTCGCATNTTAG GTGC TT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182203             [                                                                                                                                                                                                                                            ACGTCGCATNTTAG GTGC TT GGTTGA  CCTGNATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD182285             [                                                                                                                                                                                                                                            ACGTCGCATTTTAG GTGC TT GGTTGA  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGC TTTGCAAGTTTTACCTTCATCCT                                                                                          ]
[-] EMBL CD159356             [                                                                                                                                                                                                                                                                        A  CCTGGATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTATGCTCGCTGGAGAGTCA                                                                                                                                                                                     ]
[-] EMBL CD159097             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[-] EMBL CD159222             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[-] EMBL CD159259             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAACCGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[-] EMBL CD159376             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[-] EMBL CD159074             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[-] EMBL CD159253             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCTAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTGCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCA                                   ]
[-] EMBL CD159204             [                                                                                                                                                                                                                                                                                ATGTGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC                                                                                                                                                                                ]
[+] EMBL CD160970             [                                                                                                                                                                                                                                                                                   TGTTTGATGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTG                          ]
[-] EMBL CD133029             [                                                                                                                                                                                                                                                                                          TGTACAAACGACTGGCT TCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTTACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAA                                  ]
[-] EMBL CD202740             [                                                                                                                                                                                                                                                                                                                             TTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCCCAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTCCCG         ]
[-] EMBL CD185230             [                                                                                                                                                                                                                                                                                                                                  ATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTCCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTA                                             ]
[-] EMBL CD131726             [                                                                                                                                                                                                                                                                                                                                  ATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTA                                             ]
[-] EMBL CD156767             [                                                                                                                                                                                                                                                                                                                                                 ATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTC            ]
[-] EMBL CD156732             [                                                                                                                                                                                                                                                                                                                                                 ATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCACGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTC            ]
[-] EMBL CD156710             [                                                                                                                                                                                                                                                                                                                                                 ATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTC            ]
[-] EMBL CD156707             [                                                                                                                                                                                                                                                                                                                                                 ATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTC            ]
[-] EMBL CD157496             [                                                                                                                                                                                                                                                                                                                                                                    AAGTAGCATTTGAGCAGACTTGTTGGGCCATCTACCATGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACGACCAACGCCACCATCAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA  T TTTTAAGTAAGTTTGTGCTCGATGGAGAGTCATTCCTTTCAC                                                                                                                                                                           ]
[-] EMBL CD182273             [                                                                                                                                                                                                                                                                                                                                                                                                                                   AGCATGACGACCAACGCCGCCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTG GCAAGC CACTCATGCATG TTTTGAAATGAGTCCTCAGGTATGGGATTCCTGC TTTGCAAGTTTTACCCTCATCCT                                                                                          ]
[-] EMBL CD182256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACA TT TTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCGCAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGGATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTGCCCACc                                                                        ]
[-] EMBL CD159392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTCCCTTCACTGCACAAGCACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAACGTGGACGGACAAACTTCCCGCTCCCAAGA]
[+] EMBL CD123191             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAA                                  ]
[-] EMBL CD123368             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGC TTTGCAAGTTTTACCTTCATCCTCATCATTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAA                                 ]


>consensus_11391#0 TTTTTTTTTTTTTTTTGCTAAATTATCCAGCCATATATATTTAGATAATTAAAAACCAGC ACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTG TGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTAC ATGGCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATATGTACGACGTCG CATTTTAGGTGCTTGGTTGACCTGGATGTGTTTGATGTACAAACGACTGGCTTCTCCTCC TTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTG AGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTGCTTGAGCATGACG ACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCTCAATGACATTTTT TAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCAT GTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGCTTTGCAAGTTTTACCTTCATCCTC ATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAACAGCGCCAAAAAAC GTGGACGGACAAACTTCCCGCTCCCAAGA



consensusID : consensus_11391#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 667
fasta sequence
                              [GNATTCGGTACGAGGATTATCAAGGAGAAGGTTATGGATTAGTAGGTGAAGAAACGTATGTTAAAAAACCAAAAGATCCTAGTAAATATGATCAATATGGAAATTATAT-CCTGATTATCAGACACCACAACCTTCTCCTCCTCCTCCTCATCCTACTCCTATACCTTCTAATTCAAACGAACAACCTAGTGGTAACGTAGGAGAAAACGTTAATAATGAGGAAGGCGAAG-AT-ATAAACCCGATGAAACAGAAGAGAACGAA-TATAAGCCTACTAGATATGTTAAATATAAGAAATACAAACCGTCAAACAAACGCGTATCAAGCAAAACAAAATCATCCAAGAAAGGAACGAAAGGAACCAAAGGAACGAAAGGAACGAAAGGAAAGAGGGGAAAAGGAAAGTATAAAAAATATGGAAATAGGTACAAACCACAACCAACACCACATCCAGAAGAACCACAAACTATACCACAACATGGCGAAGACGACGGAGAAGATGAAGAAAACGAACAGTGATATTGGTAAACATAGGTGAATAAAATACAAATGCAAACAACATGAAAAATGATCTTTATATTAAACTAATATGAACTGTTTATACAAGTGAACTGTTATAATAATAATAATAATAATAATAATGGTAATAACATAAAAAAAAAAAAAAAAA]

[+] EMBL CD077920             [GNATTCGGTACGAGGATTATCAAGGAGAAGGTTATGGATTAGTAGGTGAAGAAACGTATGTTAAAAAACCAAAAGATCCTAGTAAATATGATCAATATGGAAATTATATACCTGATTATCAGACACCACAACCTTCTCCTCCTCCTCCTCATCCTACTCCTATACCTTCTAATTCAAACGAACAACCTAGTGGTAACGTAGGAGAAAACGTTAATAATGAGGAAGGCGAAG ATAATAAACCCGATGAAACAGAAGAGAACGAA TATAAGCCTACTAGATATGTTAAATATAAGACATACAAACCGTCAAACAAACGCGTATCAAGCAAAACAAAATCATCCAAGACAGGAACGAAAGGAACCAAAGGAACGAAAGGAACGAAAGGAc                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD083520             [        cACGAGGATTATGAAGGAGAAGGTTATGGATTAGTAGGTGAAGAAACGTATGTTAAAAAACCAAAAGATCCTAGTAAATATGATCAATATGGAAATTATAT CCTGATTATCAGACACCACAACCTTCTCCTCCTCCTCCTCATCCTACTCCTATACCTTCTAATTCAAACGAACAACCTAGTGGTAACGTAGGAGAAAACGTTAATTATGAGGAAGGCGAAGCAT ATAAACCCGATGAAACAGAAGAGAACGAACTAT AGCCTACTAGATATGTTAAATATTAGAAATACAAACCGTCAAACAAACGCGTATCATGCAAAACAAAATCATCCAAGAAAGGAACGAAAGGAACCAAAGGAACGAAAGGAACGAAAGGAAAGA                                                                                                                                                                                                                                                                                       ]
[-] EMBL AI395438             [                                                                                                                                                                                                                                                             agggGAACGAA TATAAGCCCACTAGATATGTTAAATATAAGAAATACAAACCGTCAAACAAACGCGTATCAAGCAAAACAAAATCATCCAAGAAAGGAACGAAAGGAACCAAAGGAACGAAAGGAACGAAAGGAAAGAGGGGAAAAGGAAAGTATAAAAAATATGGAAATAGGTACAAACCACAACCAACACCACATCCAGAAGAACCACAAACTATACCACAACATGGCGAAGACGACGGAGAAGATGAAGAAAACGAACAGTGATATTGGTAAACATAGGTGAATAAAATACAAATGCAAACAACATGAAAAATGATCTTTATATTAAACTAATATGAACTGTTTATACAAGTGAACTGTTATAATAATAATAATAATAATAATAATGGTAATAACATAAAAAAAAAAAAAAAAA]


>consensus_11391#1 GNATTCGGTACGAGGATTATCAAGGAGAAGGTTATGGATTAGTAGGTGAAGAAACGTATG TTAAAAAACCAAAAGATCCTAGTAAATATGATCAATATGGAAATTATATCCTGATTATCA GACACCACAACCTTCTCCTCCTCCTCCTCATCCTACTCCTATACCTTCTAATTCAAACGA ACAACCTAGTGGTAACGTAGGAGAAAACGTTAATAATGAGGAAGGCGAAGATATAAACCC GATGAAACAGAAGAGAACGAATATAAGCCTACTAGATATGTTAAATATAAGAAATACAAA CCGTCAAACAAACGCGTATCAAGCAAAACAAAATCATCCAAGAAAGGAACGAAAGGAACC AAAGGAACGAAAGGAACGAAAGGAAAGAGGGGAAAAGGAAAGTATAAAAAATATGGAAAT AGGTACAAACCACAACCAACACCACATCCAGAAGAACCACAAACTATACCACAACATGGC GAAGACGACGGAGAAGATGAAGAAAACGAACAGTGATATTGGTAAACATAGGTGAATAAA ATACAAATGCAAACAACATGAAAAATGATCTTTATATTAAACTAATATGAACTGTTTATA CAAGTGAACTGTTATAATAATAATAATAATAATAATAATGGTAATAACATAAAAAAAAAA AAAAAAA



consensusID : consensus_11391#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 401
fasta sequence
                              [GACGACGTCGCATCTACGTGCTTGTTAGCCTGTATGTGTATCATGTACAAACTGAATGGCTCTCCCTCCTTCTATGTCTCTGTATACGTCATTGCTGAATGCATTGTGCAGAAGCTTAAGTAGCATCTGAGCAAACTTTTTGGGCCATCTACCCTGAGATGTTTTCCAAACTTTTGCCTGAGCATGTCGACCAGCGCCACCATTAAATCGGCGGAAAGGAATAATCTCATTCTTCTCAATGACATTTTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCGTGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGCTTTGCAAGTTTTACCTTCAGCCTCATCTTTTGGTTCCCACGAGTGCTTTCCCATTA]

[-] EMBL CD182277             [GACGACGTCGCATCTACGTGCTTGTTAGCCTGTATGTGTATCATGTACAAACTGAATGGCTCTCCCTCCTTCTATGTCTCTGTATACGTCATTGCTGAATGCATTGTGCAGAAGCTTAAGTAGCATCTGAGCAAACTTTTTGGGCCATCTACCCTGAGATGTTTTCCAAACTTTTGCCTGAGCATGTCGACCAGCGCCACCATTAAATCGGCGGAAAGGAATAATCTCATTCTTCTCAATGACATTTTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACACTCATGCGTGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGCTTTGCAAGTTTTACCTTCAGCCTCATCTTTTGGTTCCCACGAGTGCTTTCCCATTA]


>consensus_11391#2 GACGACGTCGCATCTACGTGCTTGTTAGCCTGTATGTGTATCATGTACAAACTGAATGGC TCTCCCTCCTTCTATGTCTCTGTATACGTCATTGCTGAATGCATTGTGCAGAAGCTTAAG TAGCATCTGAGCAAACTTTTTGGGCCATCTACCCTGAGATGTTTTCCAAACTTTTGCCTG AGCATGTCGACCAGCGCCACCATTAAATCGGCGGAAAGGAATAATCTCATTCTTCTCAAT GACATTTTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAGCACA CTCATGCGTGTTTTTGAAATGAGTCCTCAGGTATGGGATTCCTGCTTTGCAAGTTTTACC TTCAGCCTCATCTTTTGGTTCCCACGAGTGCTTTCCCATTA



consensusID : consensus_11391#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 327
fasta sequence
                              [CCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGT-GGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAGGTGCTTGGTTGACCTGGATGTGTTTGATGTACAAACGACTGGCTTCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGGCCTCGTGCCGAAAATTGGCTCGGT]

[-] EMBL CD083205             [CCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGT GGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAGGTGCTTGGTTGACCTGGATGTGTTTGATGTACAAACGACTGGCTTCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGGCCTCGTGCCGAAAATTGGCTCGGT]
[+] EMBL CD184399             [  AGCCGTATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTCGGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGCATGACTTCTACATGGCATGGTGAACACct                                                                                                                                                           ]
[-] EMBL CD133982             [   GCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGT GGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGATTAAT                                                                                                                                               ]
[-] EMBL CD190900             [   GCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACCAACTGT GGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGATTAAT                                                                                                                                               ]
[-] EMBL AA931028             [   aCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGT GGAGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCA                                                                                                                                                                                           ]
[-] EMBL CD158478             [                                                                                                                   TAGGAACAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAGGTGCTTGGTTG                                                                                              ]


>consensus_11391#3 CCAGCCATATATATTTAGATAATTAAAAACCAGCACTCTCCTTCATTAGTTGTTTCTTTA TCTTTTTCTTAGATTCCTTCTTCTTTACTAACTGTGGAGCAGCTGCAGGTACCTTAGGAA CAATATCGTCTTTTGTAGCAAGTATGACTTCTACATGGCATGGTGAACACATGTAAGGAT TAATACGACCGTGGGCACGATATGTACGACGTCGCATTTTAGGTGCTTGGTTGACCTGGA TGTGTTTGATGTACAAACGACTGGCTTCTCCTCCTTTTATGTCTTTGTATACACCATTGC TGGCCTCGTGCCGAAAATTGGCTCGGT



consensusID : consensus_11391#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 248
fasta sequence
                              [TGTGTTTGATGTACAACCGACTGGCTTGTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGAATTTTTGGGTCATTTTCCTTGAGATGTCTTCCAGTCATTAGCTTGAGCATGGCGGCCAACTCCTCCATTAAATCGGCGGAAAGGAATAATGTCTGTCTTTTCAATGACTTTTCTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC]

[-] EMBL CD159103             [TGTGTTTGATGTACAACCGACTGGCTTGTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGAATTTTTGGGTCATTTTCCTTGAGATGTCTTCCAGTCATTAGCTTGAGCATGGCGGCCAACTCCTCCATTAAATCGGCGGAAAGGAATAATGTCTGTCTTTTCAATGACTTTTCTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCC]


>consensus_11391#4 TGTGTTTGATGTACAACCGACTGGCTTGTCCTCCTTTTATGTCTTTGTATACACCATTGC TGAATGCATTGTGCAGAAGCTGAAGTAGCATTTGAGCAGAATTTTTGGGTCATTTTCCTT GAGATGTCTTCCAGTCATTAGCTTGAGCATGGCGGCCAACTCCTCCATTAAATCGGCGGA AAGGAATAATGTCTGTCTTTTCAATGACTTTTCTTAAGTAAGTTTGTGCTCGCTGGAGAG TCATTCCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11391#0      ------------------------------------------------------------
consensus_11391#3      ------------------------------------------------------------
consensus_11391#2      ------------------------------------------------------------
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      GNATTCGGTACGAGGATTATCAAGGAGAAGGTTATGGATTAGTAGGTGAAGAAACGTATG 60
                                                                                   

consensus_11391#0      -------TTTTTTTTTTTTTTTTGCTAAATTATCCAGCCATATATATTTAGATAAT-TAA 52
consensus_11391#3      ---------------------------------CCAGCCATATATATTTAGATAAT-TAA 26
consensus_11391#2      ------------GACGACGTCGCATCTACGTGCTTGTTAGCCTGTATGTGTATCATGTAC 48
consensus_11391#4      ----------------------------------------------TGTGTTTGATGTAC 14
consensus_11391#1      TTAAAAAACCAAAAGATCCTAGTAAATATGATCAATATGGAAATTATATCCTGATTATCA 120
                                                                     * *      * *  

consensus_11391#0      AAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTC-TTCTT 111
consensus_11391#3      AAACCAGCACTCTCCTTCATTAGTTGTTTCTTTATCTTTTTCTTAGATTCCTTC-TTCTT 85
consensus_11391#2      AAACTGAATGGCTCTCCCTCCTTCTATGTCTCTGTATACGTCATTGCTGAATGCATTGTG 108
consensus_11391#4      AA-CCGACTGGCTTGTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTG 73
consensus_11391#1      GACACCACAACCTTCTCCTCCTCCTCCTCATCCTACTCCTATACCTTCTAATTC-AAACG 179
                        *         **    *      *     *     *              * *      

consensus_11391#0      TACTAACTGT-GG-AGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGT 169
consensus_11391#3      TACTAACTGT-GG-AGCAGCTGCAGGTACCTTAGGAACAATATCGTCTTTTGTAGCAAGT 143
consensus_11391#2      CAGAAGCTTA-AGTAGCATCTGAGCAAACTTTTTGGGCCAT-CTACCCTGAGATGTTTTC 166
consensus_11391#4      CAGAAGCTGA-AGTAGCATTTGAGCAGAATTTTTGGGTCAT-TTTCCTTGAGATGTCTTC 131
consensus_11391#1      AACAACCTAGTGGTAACGTAGGAGAAAACGTTAATAATGAG-GAAGGCGAAGATATAAAC 238
                        *  * **    * * *    *     *  **       *           *        

consensus_11391#0      ATGACTTCTACATG-GCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATA 228
consensus_11391#3      ATGACTTCTACATG-GCATGGTGAACACATGTAAGGATTAATACGACCGTGGGCACGATA 202
consensus_11391#2      CAAACTTTTGCCTGAGCATGTCGACCA-GCGCCACCATTAAATCGGCGGAAAGGAATA-A 224
consensus_11391#4      CAGTCATTAGCTTGAGCATGGCGGCCA-ACTCCTCCATTAAATCGGCGGAAAGGAATA-A 189
consensus_11391#1      CCG--ATGAAACAGAAGAGAACGAATATAAGCCT--ACTAGATATGTTAAATATAAGAAA 294
                             *      *   *    *   *         * **              *  * *

consensus_11391#0      TGTACGACGTCGCATTTTAGGTGCTTGGTTGACCTGGATGTGTTTGATGTACAAACGACT 288
consensus_11391#3      TGTACGACGTCGCATTTTAGGTGCTTGGTTGACCTGGATGTGTTTGATGTACAAACGACT 262
consensus_11391#2      TCTCATTCTTCTCAATGACATTTTTTAAGTAAGTT---TGTGCTCGCTGGAGAGTCA--T 279
consensus_11391#4      TGTCTGTCTTTTCAATGACTTTTCTTAAGTAAGTT---TGTGCTCGCTGGAGAGTCA--T 244
consensus_11391#1      TACAAACCGTCAAACAAACGCGTATCAAGCAAAACAAAATCATCCAAGAAAGGAACGAAA 354
                       *      * *   *          *      *                  *    *    

consensus_11391#0      GGCTTCTCCTCCTTTTATGTCTTTGTATACACCATTGCTGAATGCATTGTGCAGAAGCTG 348
consensus_11391#3      GGCTTCTCCTCCTTTTATGTCTTTGTATACACCATTGCTG---GCCTCGTGCCGAAAATT 319
consensus_11391#2      TCCCTTCACTGCACAAGCACACTCATGCGTGTTTTTGAAATGAGTCCTCAGGTATGGGAT 339
consensus_11391#4      TCCC-------------------------------------------------------- 248
consensus_11391#1      GGAACCAAAGGAACGAAAGGAACGAAAGGAAAGAGGGGAAAAGGAAAGTATAAAAAATAT 414
                                                                                   

consensus_11391#0      AAGTAG-CATTTGAGCAGACTTTTTGGGCCATCTACCCTGAGTTGTTTTCCAGACTTTTG 407
consensus_11391#3      GGCTCG-GT--------------------------------------------------- 327
consensus_11391#2      TCCTGC-TTTGCAAGTTTTACCTTCAGCCTCATCTTTTGGTTCCCACGAGTGCTTTCCCA 398
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      GGAAATAGGTACAAACCACAACCAACACCACATCCAGAAGAACCACAAACTATACCACAA 474
                                                                                   

consensus_11391#0      CTTGAGCATGACGACCAACGCCACCATTAAATCGGCGGAAAGGAATAATCTCTTTCTTCT 467
consensus_11391#3      ------------------------------------------------------------
consensus_11391#2      TTA--------------------------------------------------------- 401
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      CATGGCGAAGACGACGGAGAAGATGAAGAAAACGAACAGTGATATTGGTAAACATAGGTG 534
                                                                                   

consensus_11391#0      CAATGACATTTTTTAAGTAAGTTTGTGCTCGCTGGAGAGTCATTCCCTTCACTGCACAAG 527
consensus_11391#3      ------------------------------------------------------------
consensus_11391#2      ------------------------------------------------------------
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      AATAAAATACAAATGCAAACAACATGAAAAATGATCTTTATATTAAACTAATATGAACTG 594
                                                                                   

consensus_11391#0      CACACTCATGCATGTTTTTGAAATGAGTCCTCAGGTATGGGATTCTTGCTTTGCAAGTTT 587
consensus_11391#3      ------------------------------------------------------------
consensus_11391#2      ------------------------------------------------------------
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      TTTATACAAGTGAACTGTTATAATAATAATAATAATAATAATAATGGTAATAACATAAAA 654
                                                                                   

consensus_11391#0      TACCTTCATCCTCATCTTTTGGTTCCCACGAGTACTTTACCATTATTCCTAAGATTAAAC 647
consensus_11391#3      ------------------------------------------------------------
consensus_11391#2      ------------------------------------------------------------
consensus_11391#4      ------------------------------------------------------------
consensus_11391#1      AAAAAAAAAAAAA----------------------------------------------- 667
                                                                                   

consensus_11391#0      AGCGCCAAAAAACGTGGACGGACAAACTTCCCGCTCCCAAGA 689
consensus_11391#3      ------------------------------------------
consensus_11391#2      ------------------------------------------
consensus_11391#4      ------------------------------------------
consensus_11391#1      ------------------------------------------
                                                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)