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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11394#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 696 fasta sequence
[GATCGTGAGCTCAGTCTCAGAAGTTACAAGTTTCCTGCTATCGAAAATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATTTCCAATGTTGAAACGTCTAAAATCGTTGATACTTACAAACAATAAGATCGCCCGTATCGCCGAGGACTTGGGTCAGCATTTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTTTCTGACCTCAAAGATTTGGATCCTCTATCATCATGTGATAAATTAAATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTAGTAATGAACAGATTCACCATGGGG-AAGGCAAAGAAAACAATGCTGCTGCCCTAAATACATCCGTCGAAACCGATCANACTGAATTCAACCAA]
[+] EMBL CD199165 [GATCGTGAGCTCAGTCTCAGAAGTTACAAGTTTCCTGCTATCGAAAATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATTTCCAATGTTGAAACGTCTAAAATCGTTGATACTTACAAACAATAAGATCGCCCGTATCGCCGAGGACTTGGGTCAGCATTTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTTTCTGACCTCAAAGATTTGGATCCTCTATCATCATGTGATAAATTAAATTTTCTAAGTCTTCTTCATTGTCCTGTAAC ATGCGAGCAA ]
[+] EMBL CD146878 [ ATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATTTCCAATGTTGAAACGTCTAAAATCGTTGATACTTACAAACAATAAGATCGCCCGTATCGCCGAGGACTTGGGTCAGCATTTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTTTCTGACCTCAAAGATTTGGATCCTCTATCATCATGTGATAAATTAAATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAG ]
[-] EMBL CD146852 [ TATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATTTCCAATGTTGAAACGTCTAAAATCGTTGATACTTACAAACAATAAGATCGCCCGTATCGCCGAGGACTTGGGTCAGCATTTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTTTCTGACCTCAAAGATTTGGATCCTCTATCATCATGTGATAAATTAAATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCCTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCA ]
[+] EMBL CD139358 [ TTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTTTCTGACCTCAAAGATTTGGATCCTCTATCATCATGTGATAAATTAAATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTCAAACGTCTTCCTGCTCTATCAAACAGCGTAAATCATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTAGTAAT ]
[+] EMBL CD139464 [ ACAGTGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTAGTAATGAACAGATTCACCATGGGG AAGGCAAAGAAAACAATGCTGCTGCCCTAAATACATCCGTCG ]
[+] EMBL AA559563 [ TAAACTAGCTCGATCAATGTTTAAACGTCTNCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTNGTTAAAACATTTATNCCNGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACNAGATCTAGTATTGAACAGATTCNCCATGGGGAAAGGCAAAGAAAACAATGCTGCTGCCCTAAATACGTCCGTCGAAACCGATCANACTGAATTCAACCAA]
consensusID : consensus_11394#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 57 consensus length = 408 fasta sequence
[CGCAGGCCAGAATTCGGCACGAGGATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGGGTCGCATCTCTTCGCTTTTTAGATTA-TCGTCGTGTTAC-CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA-ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA-ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA-GTAATGAACAGATTCACCAT-GGGGAAGGCAAAGAAAACAATGCTGC-GACCCGNGCTGTGNNNNNNN]
[+] EMBL CD078217 [CGCAGGCCAGAATTCGGCACGAGGATTTTCTAAGTCTTCTTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATATGTTATCAGCCGCGTCGCATCTCTTCGCTTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCATTTCCTGCT ]
[-] EMBL CD070665 [ CGGGTCGCATCTCTTCGCTTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070683 [ GGGTCGCATCTCTTCGCTTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[+] EMBL CD096621 [ CTCTTCGC TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCG NCAATG TTAAACGTCTTCCTGCTCTATCAAACAGCGCAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[-] EMBL CD199373 [ CTTCGCTTCTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[+] EMBL CD070675 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCCTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GNGGAAGGCAAAGAAAACAATGCTGC GACCCGNGCTGTG ]
[+] EMBL CD199452 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGAAAACAATGCTGC GACCCG ]
[+] EMBL CD070620 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT NGGGAAGGCAAAGAAAACAATGCTGC GACCC ]
[+] EMBL CD199434 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCGACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGAAAACAATGCTGC GACCC ]
[+] EMBL CD199341 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCANATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCATNGGGGAAGGCAAAGAAAAC ATGCTGC GACCC ]
[+] EMBL CD147202 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD147083 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAACGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD199362 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD070614 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD070654 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTANATAATCTAAAAGCACCATATCAGANAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTANATTC AATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD199363 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATGGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGnncaa ]
[+] EMBL CD070694 [ TTTTTAGATTA TCGTCGTGCTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTANATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGCTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GNGGAAGGCAAAG ]
[+] EMBL CD070686 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GNGGAAGGCAAAa ]
[+] EMBL CD096567 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA GCTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD199343 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCTT GGGGAAGGCAAAG ]
[+] EMBL CD096523 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAGACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAC GGGGAAGGCAAAG ]
[+] EMBL CD096512 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD096587 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD096607 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD096628 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD096634 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD147040 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD147079 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD199443 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAGTTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCT GTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT NGGGAAGGCAAAG ]
[+] EMBL CD199438 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGGCTTCCTGCTCTATCAAACAGCGTACATAATCTAAAAGCACCATATCAGATAGCGAATTCTAATCGTATAGAAC ACTCAATTCCTGCTGCTGACGATGTTAAAACATTTATTCCT GTGCTCGAATTA ATTCATATCATCTTCTCCCTCCTGGTACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGCGAAGGCAAAG ]
[+] EMBL CD147091 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCGTATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCT CTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAG ]
[+] EMBL CD199395 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGANAGCGAATTCTAATCGTATAGAAN ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAA ]
[+] EMBL CD096527 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGGAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGAAAACAATGCTGCGGACCCGGGCTGNNNNNNNNN]
[+] EMBL CD147102 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCT ]
[+] EMBL CD199428 [ TTTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCGGATAGCGAATTCTAATCGTATAGAAAGACTC ATTCCTGCTGC ]
[-] EMBL CD199400 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAGCGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCATCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070603 [ TTTTAGATTA TCGTCGTGTTAC NCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAATCGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD147052 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD147063 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD096599 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCCGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD147159 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD147199 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD147229 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGGAGGCAAAGA ]
[-] EMBL CD199357 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTNTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATACAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070706 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199328 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070646 [ TTTTAGATTA TCGTCGTG TACNCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070679 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAATATTTATTCCTGGTGCACCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199399 [ TTTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCGGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAACCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199356 [ TTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199444 [ TTTAGATTA TCGTCGTGTGAC ACAAGCTGAACGTAGACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070663 [ TTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAGCGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199406 [ TTTAGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD070591 [ TTTAGATTANTCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTAGATCAATGTNTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199332 [ AGATTA TCGTCGTGTTAC CCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCGCCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD199355 [ TCGTGTTAC CCAAGCTGANCGTAAACTAGCTCGATCAATGTTNAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAACATTTATTCCTGGTGCTCCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTA GTAATGAACAGATTCACCAT GGGGAAGGCAAAGA ]
[-] EMBL CD200328 [ ATGTTTAAACGTCTTCCGGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCGAATTCTAATCGTATAGAAA ACTCAATTCCTGCTGCTGGTGTTGTTAAAATATTTATTCCTGGTGCACCAATTA ATTCAAATAATCTTCTCCCTCCTGGAACTGAGCCAACAAGATCTAGGTAATGAACAGATTCACCAT GGGGAAGGC ]
consensusID : consensus_11394#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence
[TGCTATCGAAAATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATCTCCAATGTTGAAACGCCTAAAATCGTTGATACTTACAAACAATAAGCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTCCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCCAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTTAAA]
[+] EMBL CD092843 [TGCTATCGAAAATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATCTCCAATGTTGAAACGCCTAAAATCGTTGATACTTACAAACAATAAGCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTAGCTCGATCAATGTTTAAACGTCTCCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCACCATATCAGAAAGCCAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTTAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11394#0 GATCGTGAGCTCAGTCTCAGAAGTTACAAGTTTCCTGCTATCGAAAATATGGGGTGTACA 60
consensus_11394#1 ------------------------------------------------------------
consensus_11394#2 ------------------------------------------------------------
consensus_11394#0 TTGGATCAGTTCGATACCATTGATCTTTCAGATAATGAAATCAGAAAACTCGACGGATTT 120
consensus_11394#1 ------------------------------------------------------------
consensus_11394#2 ------------------------------------------------------------
consensus_11394#0 CCAATGTTGAAACGTCTAAAATCGTTGATACTTACAAACAATAAGATCGCCCGTATCGCC 180
consensus_11394#1 ------------------------------------------------------------
consensus_11394#2 ------------------------------------------------------------
consensus_11394#0 GAGGACTTGGGTCAGCATTTACCCAATCTCTTGACCCTTATCCTAACTAGTAATTACCTT 240
consensus_11394#1 ------------------------------------------------------------
consensus_11394#2 ------------------------------------------------------------
consensus_11394#0 TCTGACCTCAAAGATTTGGATCCTCTATCATC---ATGTGATAAATTAAATTTTCTAAGT 297
consensus_11394#1 ---------------------CGCAGGCCAGA---ATTCGGCACGA-GGATTTTCTAAGT 35
consensus_11394#2 --TGCTATCGAAAATATGGGGTGTACATTGGATCAGTTCGATACCATTGATCTTTCAGAT 58
* * * ** ** * *
consensus_11394#0 CTTC---TTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATA--TGTTATCAGCC 352
consensus_11394#1 CTTC---TTCATTGTCCTGTAACAATGCGAGCAAATTACCGACTATA--TGTTATCAGCC 90
consensus_11394#2 AATGAAATCAGAAAACTCGACGGATCTCCAATGTTGAAACGCCTAAAATCGTTGATACTT 118
* * * * * * * * ** *** * *** *
consensus_11394#0 GCGTCGCATCT-CTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTA 411
consensus_11394#1 GGGTCGCATCT-CTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTA 149
consensus_11394#2 ACAAACAATAAGCTTCGCTTTTTAGATTATCGTCGTGTTACCCAAGCTGAACGTAAACTA 178
** ************************************************
consensus_11394#0 GCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCA 471
consensus_11394#1 GCTCGATCAATGTTTAAACGTCTTCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCA 209
consensus_11394#2 GCTCGATCAATGTTTAAACGTCTCCCTGCTCTATCAAACAGCGTAAATAATCTAAAAGCA 238
*********************** ************************************
consensus_11394#0 CCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTT 531
consensus_11394#1 CCATATCAGAAAGCGAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTT 269
consensus_11394#2 CCATATCAGAAAGCCAATTCTAATCGTATAGAAAACTCAATTCCTGCTGCTGGTGTTGTT 298
************** *********************************************
consensus_11394#0 AAAACATTTATTCCTGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAG 591
consensus_11394#1 AAAACATTTATTCCTGGTGCTCCAATTAATTCAAATAATCTTCTCCCTCCTGGAACTGAG 329
consensus_11394#2 AAA--------------------------------------------------------- 301
***
consensus_11394#0 CCAACAAGATCTAGTAATGAACAGATTCACCATGGGGAAGGCAAAGAAAACAATGCTGCT 651
consensus_11394#1 CCAACAAGATCTAGTAATGAACAGATTCACCATGGGGAAGGCAAAGAAAACAATGCTGCG 389
consensus_11394#2 ------------------------------------------------------------
consensus_11394#0 GCCCTAAATACATCCGTCGAAACCGATCANACTGAATTCAACCAA 696
consensus_11394#1 ACCCGNGCTGTGNNNNNNN-------------------------- 408
consensus_11394#2 ---------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||