These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1559#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 230 fasta sequence [ATTGACTTGAACTAAAATCACTATTTGGAAAATAACGTCCATGATCAAAACGATGTACTGATATGTATAATATATTTGGATCATCTTCAAATATTTCCGCTGTACCAATACCATGATGAACATCCCAGTCAATAATTGCAATCCGTTCTAGTCCATAGACTTGTTGAGCATGTCTAGCACCGATTGCCACATTATTGAAAAAACAAAATCCCATACAACGATCTTTTAAA] [+] EMBL CD180640 [ATTGACTTGAACTAAAATCACTATTTGGAAAATAACGTCCATGATCAAAACGATGTACTGATATGTATAATATATTTGGATCATCTTCAAATATTTCCGCTGTACCAATACCATGATGAACATCCCAGTCAATAATTGCAATCCGTTCTAGTCCATAGACTTGTTGAGCATGTCTAGCACCGATTGCCACATTATTGAAAAAACAAAATCCCATACAACGATCTTTTAAA] consensusID : consensus_1559#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 116 fasta sequence [CTCTAAAAGATCGCTGTATGGGATTTTGTTATTTCAATTATTGACTGGGATGTTCATCATGGTAATGGACCAGCGGAAATATTTGAAAATGATCCAAATATATTATACATATCAAT] [+] EMBL CD163043 [CTCTAAAAGATCGCTGTATGGGATTTTGTTATTTCAATTATTGACTGGGATGTTCATCATGGTAATGGACCAGCGGAAATATTTGAAAATGATCCAAATATATTATACATATCAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1559#0 ATTGACTTGAACTAAAATCACTATTTGGAAAATAACGTCCATGATCAAAACGATGTACTG 60 consensus_1559#1 -----CTCTAA--AAGATCGCTGTATGGGAT------TTTGTTATTTCAATTATTGACTG 47 ** ** ** *** ** * *** * * * ** ** ** **** consensus_1559#0 ATATGTATAATATATT--TGGATCATCTTCAAATATTTCCGCTGTACCAATACCATGATG 118 consensus_1559#1 GGATGTTCATCATGGTAATGGACCAGCGG-AAATATTTGAAAATGATCCAAAT-ATATTA 105 **** * ** * **** ** * ******** * * * * ** * consensus_1559#0 AACATCCCAGTCAATAATTGCAATCCGTTCTAGTCCATAGACTTGTTGAGCATGTCTAGC 178 consensus_1559#1 TACATATCAAT------------------------------------------------- 116 **** ** * consensus_1559#0 ACCGATTGCCACATTATTGAAAAAACAAAATCCCATACAACGATCTTTTAAA 230 consensus_1559#1 ---------------------------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||