Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 1575 cluster # 1575       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1575#0 length = 445 sequences # 2  
consensusID : consensus_1575#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 445
fasta sequence 
                              [ATTTAAATTAGGACTACACAGATGAGAAGCTTTGATATTCTGTGAATCATCCAAGACAGTTTTACTGAGACCAAGCTTCGAAATAATGTATAGAGGGACGTCAGCTGAAATGATCTGAGAAGCTGGTACATTAACGGAGTTCGTTCGATGACGTACATGACTTTCAGCAACTTCTAACATTTGATAGAATTCAGACGGATCGAACTCTAAACATTCGAGTAATCGTGCAGGCCGGGCAATAATCAAAAGTAGTCGGCGGACAAATGTGACGACAAGCGGAATAGAATCCGAGTCACGAGTACGAGTATCTTCGACAAGTTTGCTCAAATTTTCAGTCATTTCATTAAAATAGCGACAAGTTACAAGACCTGAAAGAGCCTTCTGCAAACAATCTCGTGCATGTTGGACAACTTGACAATGGACAAATCTTGCTACTGCAGACCAC]

[+] EMBL CD198483             [ATTTAAATTAGGACTACACAGATGAGAAGCTTTGATATTCTGTGAATCATCCAAGACAGTTTTACTGAGACCAAGCTTCGAAATAATGTATAGAGGGACGTCAGCTGAAATGATCTGAGAAGCTGGTACATTAACGGAGTTCGTTCGATGACGTACATGACTTTCAGCAACTTCTAACATTTGATAGAATTCAGACGGATCGAACTCTAAACATTCGAGTAATCGTGCAGGCCGGGCAATAATCAAAAGTAGTCGGCGGACAAATGTGACGACAAGCGGAATAGAATCCGAGTCACGAGTACGAGTATCTTCGACAAGTTTGCTCAAATTTTCAGTCATTTCATTAAAATAGCGACAAGTTACAAGACCTGAAAGAGCCTTCTGCAAACAATCTCGTGCATGTTGGACAACTTGACAATGGACAAATCTTGCTACTGCAGACCAC]
[-] EMBL CD061358             [                                                                                                                                                                                                                                               TAATCAAAAGTAGTCGGCGGACAAATGTGACGACAAGCGGAATAGAATCCGAGTCACGAGTACGAGTATCTTCGACAAGTTTGCTCAAATTTTCAGTCATTTCATAAAAATAGCGACAAGTTACAAGACCTGAAAGAGCCTTCTGCAAACAATC                                                    ]




>consensus_1575#0
ATTTAAATTAGGACTACACAGATGAGAAGCTTTGATATTCTGTGAATCATCCAAGACAGT
TTTACTGAGACCAAGCTTCGAAATAATGTATAGAGGGACGTCAGCTGAAATGATCTGAGA
AGCTGGTACATTAACGGAGTTCGTTCGATGACGTACATGACTTTCAGCAACTTCTAACAT
TTGATAGAATTCAGACGGATCGAACTCTAAACATTCGAGTAATCGTGCAGGCCGGGCAAT
AATCAAAAGTAGTCGGCGGACAAATGTGACGACAAGCGGAATAGAATCCGAGTCACGAGT
ACGAGTATCTTCGACAAGTTTGCTCAAATTTTCAGTCATTTCATTAAAATAGCGACAAGT
TACAAGACCTGAAAGAGCCTTCTGCAAACAATCTCGTGCATGTTGGACAACTTGACAATG
GACAAATCTTGCTACTGCAGACCAC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)