cluster # 1716

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Schistosoma mansoni
cluster # 1716 cluster # 1716 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1716#0 length = 722 sequences # 2

consensusID : consensus_1716#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 722
fasta sequence

                              [CACTGAGATAATCAATAATAATATGCGTAAATCTGATTTATTTCTATCAAATTGTGGTCGAACCTCAGTACTAAGGGATATATCATCCGACCAATCCATGTTAAATAGAAATAATGAAACAAATCAATACTCTGAATATAATGAAAAAGTTGGATTTATTACATTACCAAAAACTAAATCTAAACGATCACATGCTTTGGAAAATGTTGATCGTTATTCAGTGATTGAATCGACAGAAAACAATCCTTCTTCTACAACAAATTCACTTCCAACTAAAAGAATATATTTGAGCACATCAAAAAGTAGTCTTGGTCTATTGAATTTCTCCGCAAAATCTTTAGCTGAACAACTTACCTACTTAGAATGTTTAAATTATTATAAAATCAATGTGTTTGAACTGCTTGACATTTCTAAACTAGAACAAGGTAAAGCACCTGGTATAGCCGCTTGTGCACATCATTTTACAATGGTTTCTAACTGGGCCACATATCAAATTTTATCCTTGACAAGTGCGTCTGATCGTGATAAGGTTGCTAATCGTTTATTGGATGTTATGGAACACTTGTACAAACTCCAAAATTATAGTACCTACCTATCTNTA-CTNTGTGCATTNCTCCTAGTACCAGAAGCTTTG-TTTCTCGAAAAACACTCAGTCGTCTTAGTCGGGTTACGCCGTACATGCAACCGCCCTACTTTTCAAAATATCGTCGTGATTTAGAAGC]

[+] EMBL CD163966             [CACTGAGATAATCAATAATAATATGCGTAAATCTGATTTATTTCTATCAAATTGTGGTCGAACCTCAGTACTAAGGGATATATCATCCGACCAATCCATGTTAAATAGAAATAATGAAACAAATCAATACTCTGAATATAATGAAAAAGTTGGATTTATTACATTACCAAAAACTAAATCTAAACGATCACATGCTTTGGAAAATGTTGATCGTTATTCAGTGATTGAATCGACAGAAAACAATCCTTCTTCTACAACAAATTCACTTCCAACTAAAAGAATATATTTGAGCACATCAAAAAGTAGTCTTGGTCTATTGAATTTCTCCGCAAAATCTTTAGCTGAACAACTTACCTACTTAGAATGTTTAAATTATTATAAAATCAATGTGTTTGAACTGCTTGACATTTCTAAACTAGAACAAGGTAAAGCACCTGGTATAGCCGCTTGTGCACATCATTTTACAATGGTTTCTAACTGGGCCACATATCAAATTTTATCCTTGACAAGTGCGTCTGATCGTGATAAGGTTGCTAATCGTTTATTGGATGTTATGGAACACTTGTACAAACTCCAAAATTATAGTACCTACCTATCTNTA CTNTGTGCATTNCTCCTAGTACCAGAAGCTTTG TTTCTCGAAA                                                                              ]
[+] EMBL AA804152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGTTATGGAACACTTGTACAAACTCCAAAATTATAGTACCTACCTATCT TATCTTTGTGCATTTCTCCTAGTACCAGAAGCTTTGTTTTCTCGAAAAACACTCAGTCGTCTTAGTCGGGTTACGCCGTACATGCAACCGCCCTACTTTTCAAAATATCGTCGTGATTTAGAAGC]




>consensus_1716#0
CACTGAGATAATCAATAATAATATGCGTAAATCTGATTTATTTCTATCAAATTGTGGTCG
AACCTCAGTACTAAGGGATATATCATCCGACCAATCCATGTTAAATAGAAATAATGAAAC
AAATCAATACTCTGAATATAATGAAAAAGTTGGATTTATTACATTACCAAAAACTAAATC
TAAACGATCACATGCTTTGGAAAATGTTGATCGTTATTCAGTGATTGAATCGACAGAAAA
CAATCCTTCTTCTACAACAAATTCACTTCCAACTAAAAGAATATATTTGAGCACATCAAA
AAGTAGTCTTGGTCTATTGAATTTCTCCGCAAAATCTTTAGCTGAACAACTTACCTACTT
AGAATGTTTAAATTATTATAAAATCAATGTGTTTGAACTGCTTGACATTTCTAAACTAGA
ACAAGGTAAAGCACCTGGTATAGCCGCTTGTGCACATCATTTTACAATGGTTTCTAACTG
GGCCACATATCAAATTTTATCCTTGACAAGTGCGTCTGATCGTGATAAGGTTGCTAATCG
TTTATTGGATGTTATGGAACACTTGTACAAACTCCAAAATTATAGTACCTACCTATCTNT
ACTNTGTGCATTNCTCCTAGTACCAGAAGCTTTGTTTCTCGAAAAACACTCAGTCGTCTT
AGTCGGGTTACGCCGTACATGCAACCGCCCTACTTTTCAAAATATCGTCGTGATTTAGAA
GC

clustalw multiple alignements is not computed in this case