cluster # 2010

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Schistosoma mansoni
cluster # 2010 cluster # 2010 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2010#0 length = 738 sequences # 2

consensusID : consensus_2010#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 738
fasta sequence

                              [GTGTCAGATGCCACCGGCAAAGA-TTTAATTGGCTA-TAAAT-TGAAT-TTTTGGAGTTGGAGGGTGCTAACAATGATNCAATATACCCAATNCGGTTTCAAAGTGGTCTAAAGTCTGGCGAAGACGGATTCAAGATAGCAGTTTTCGCTTTAAGAACTTCGTACTTTTGGACTACTTCCTGCACATATGACGAAATCGAAGCAGTTGATGCTTCACTTTACCAGAATTTANCAAGAGATTATGATTTAATAATATTCAAGGGTGATCTTAATTACCGCAAGCTTGTAGGTGATCGTCAGTGGAAACCTGATAACCTAGACGATAAGATCAATGCCTTCCATCGAGTACAGATTGGTAGATCACCAAGCTGTACGTGTTCAAAAAAGTTAAGAGATCCAAAANCTTGGCGACCCATNCACCGATTGCTCATGTGGGCCAATGGTTGTAGCTCTTCGAGTTGCGAAATCAGATGTAGGTGTAGGTGTGGATCATNGANCGNCTTATNCGAGCTTCAAAACGAAACANAAGAATGGTGGACAACTGGAAANATATGGTTTCATTCAATTGTTTCTTCCTATTGTTCTAGTGCTTCATGAATCAATATACGACATGACTTTCTATATCATAGATCACCTTTTTTNCTGTCCCTGTTGTACTCTCTCTTCTCGATACTTATTTATCATATGCTCTCGCTAGCATTTATTTNCTAGTTGAAAGTAGGGAAAAATATATAAGCCAAAT]

[+] EMBL CD081173             [GTGTCAGATGCCACCGGCAAAGA TTTAATTGGCTA TAAAT TGAAT TTTTGGAGTTGGAGGGTGCTAACAATGATNCAATATACCCAATNCGGTTTCAAAGTGGTCTAAAGTCTGGCGAAGACGGATTCAAGATAGCAGTTTTCGCTTTAAGAACTTCGTACTTTTGGACTACTTCCTGCACATATGACGAAATCGAAGCAGTTGATGCTTCACTTTACCAGAATTTANCAAGAGATTATGATTTAATAATATTCAAGGGTGATCTTAATTACCGCAAGCTTGTAGGTGATCGTCAGTGGAAACCTGATAACCTAGACGATAAGATCAATGCCTTCCATCGAGTACAGATTGGTAGATCACCAAGCTGTACGTGTTCAAAAAAGTTAAGAGATCCAAAANCTTGGCGACCCATNCACCGATTGCTCATGTGGGCCAATGGTTGTAGCTCTTCGAGTTGCGAAATCAGATGTAGGTGTAGGTGTGGATCATNGANCGNCTTATNCGAGCTTCAAAACGAAACANAAGAATGGTGGACAACTGGAAANATATGGTTTCATTCAATTGTTTCTTCCTATTGTTCTAGTGCTTCATGAATCAATATACGACATGACTTTCTATATCATAGATCACCTTTTTTNCTGTCCCTGTTGTACTCTCTCTTCTCGATACTTATTTATCATATGCTCTCGCTAGCATTTATTTNCTAGTTGAAAGTAGGGAAAAATATATAAGCCAAAT]
[+] EMBL AI976795             [         gtCACCGGCTAAGATTTTAATTGGCTACTAAATATGAATATTTTGGAGTTGGAGGGTGCTAACAATGAT CAATATACCCAAT CGGTTTCAAAGTGGTCTAAAGTATGGCGAAGACGGATTCAAGATAGCAGTTTTCGCTTTAAG ACTTCGAACTTTTGGACTACTTCCTGCACATATGACGAAATCTAAGCAGTTGATGCTTTACTTTACCAGAATTTATCAAGAGATTATGATTTAATAATATCCAAGGGTGATCTTAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_2010#0
GTGTCAGATGCCACCGGCAAAGATTTAATTGGCTATAAATTGAATTTTTGGAGTTGGAGG
GTGCTAACAATGATNCAATATACCCAATNCGGTTTCAAAGTGGTCTAAAGTCTGGCGAAG
ACGGATTCAAGATAGCAGTTTTCGCTTTAAGAACTTCGTACTTTTGGACTACTTCCTGCA
CATATGACGAAATCGAAGCAGTTGATGCTTCACTTTACCAGAATTTANCAAGAGATTATG
ATTTAATAATATTCAAGGGTGATCTTAATTACCGCAAGCTTGTAGGTGATCGTCAGTGGA
AACCTGATAACCTAGACGATAAGATCAATGCCTTCCATCGAGTACAGATTGGTAGATCAC
CAAGCTGTACGTGTTCAAAAAAGTTAAGAGATCCAAAANCTTGGCGACCCATNCACCGAT
TGCTCATGTGGGCCAATGGTTGTAGCTCTTCGAGTTGCGAAATCAGATGTAGGTGTAGGT
GTGGATCATNGANCGNCTTATNCGAGCTTCAAAACGAAACANAAGAATGGTGGACAACTG
GAAANATATGGTTTCATTCAATTGTTTCTTCCTATTGTTCTAGTGCTTCATGAATCAATA
TACGACATGACTTTCTATATCATAGATCACCTTTTTTNCTGTCCCTGTTGTACTCTCTCT
TCTCGATACTTATTTATCATATGCTCTCGCTAGCATTTATTTNCTAGTTGAAAGTAGGGA
AAAATATATAAGCCAAAT

clustalw multiple alignements is not computed in this case