cluster # 4150

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Schistosoma mansoni
cluster # 4150 cluster # 4150 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4150#0 length = 621 sequences # 3

consensusID : consensus_4150#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 621
fasta sequence

                              [AACCAAGAGTATATAGTTAACCTTCGATAGGGTATGTATGTACATATTGCAAGATTTCTTTTTTTCAGAATCGACCAGTCTTACTGATTATTTACGGATAGGAAGGGGTGGACAAAAGTATATAATATATATGTAAATATATAAATAAATCAAGAAATACCGGGCACCCATAGTACCTGATTAAAAATAAGCACAAAAGTTTAATAAATGCATTATGTCTGGAATAAAAGTAACATCTCTCATGTACAATAATATAGACTATAAACTACAAAAGGAAGACAATATTATATTGATGGGAAAGTTTAAAGAGTGAACCACTACAAGAAAATAATAATAATAATAATGACTAATATAACAAGTTAGCTTATCACATA-TA-TTGCGATGAGATGTATTGAGAATGAAACAGTTATTGAAAATTTTCTTTCAGGAGCACCTTAAAAGCACAGATGGTGGATAGTTCATTCCACTTCTGAGGTTAATAAGTCATTATGAAAGCAATTTCTTTAGAAAGACATTGAAAATAATACAGGCGAATGAGTTAAGCCTTCTATTTTTAGAAAATAAAGTTGAAAATGATTAGTTGCTAAGTTAAATGAAAAGAATATCAGAAATAGAGCAGGT]

[+] EMBL AI975370             [AACCAAGAGTATATAGTTAACCTTCGATAGGGTATGTATGTACATATTGCAAGATTTCTTTTTTTCAGAATCGACCAGTCTTACTGATTATTTACGGATAGGAAGGGGTGGACAAAAGTATATAATATATATGTAAATATATAAATAAATCAAGAAATACCGGGCACCCATAGTACCTGATTAAAAATAAGCACAAAAGTTTAATAAATGCATTATGTCTGGAATAAAAGTAACATCTCTCATGTACAATAATATAGACTATAAACTACAAAAGGAAGACAATATTATATTGATGGGAAAGTTTAAAGAGTGAACCACTTCAAGAAAATAATAATAATAATAATGACTAATATAACAAGTTAGCTTATCACATA TA TTGCGATGAGATGTATTGAGAATGAAACAGTTATTGAAAATTTTCTTTCAGGAGCACCTTAAAA                                                                                                                                                                                     ]
[+] EMBL CD196427             [                  AACCTTCGATAGGGTATGTATGTACATATTGCAAGATTTCTTTTCTTCAGAATCGACCAGTCTTACTGATTATTTACGGATAGGAAGGGGTGGACAAAAGTATATAATATATATGTAAATATATAAATAAATCAAGAAATACCGGGCACCCATAGTACCTGATTAAAAATAAGCACAAAAGTTTAATAAATGCATTATGTCTGGAATAAAAGTAACATCTCTCATGTACAATAATATAGACTATAAACTACAAAGGGAAGACAATATTATATTGATGGGAAAGTTTAAAGAGTGAACCACTACAAGAAAATAATAATAATAATAATGACTAATATAACAAGTTAGCTTATCACATATTATTTGCGATGAGAT                                                                                                                                                                                                                                         ]
[+] EMBL CD196907             [                                                                                                                                                                                                                                                                                                                          agaaaACACGAAAATAATAATAATAATAATGACTAATATAACAAGTTAGCTTATCACATA TA TTGCGATGAGATGTATTGAGAATGAAACAGTTATTGAAAATTTTCTTTCAGGAGCACCTTAAAAGCACAGATGGTGGATAGTTCATTCCACTTCTGAGGTTAATAAGTCATTATGAAAGCAATTTCTTTAGAAAGACATTGAAAATAATACAGGCGAATGAGTTAAGCCTTCTATTTTTAGAAAATAAAGTTGAAAATGATTAGTTGCTAAGTTAAATGAAAAGAATATCAGAAATAGAGCAGGT]




>consensus_4150#0
AACCAAGAGTATATAGTTAACCTTCGATAGGGTATGTATGTACATATTGCAAGATTTCTT
TTTTTCAGAATCGACCAGTCTTACTGATTATTTACGGATAGGAAGGGGTGGACAAAAGTA
TATAATATATATGTAAATATATAAATAAATCAAGAAATACCGGGCACCCATAGTACCTGA
TTAAAAATAAGCACAAAAGTTTAATAAATGCATTATGTCTGGAATAAAAGTAACATCTCT
CATGTACAATAATATAGACTATAAACTACAAAAGGAAGACAATATTATATTGATGGGAAA
GTTTAAAGAGTGAACCACTACAAGAAAATAATAATAATAATAATGACTAATATAACAAGT
TAGCTTATCACATATATTGCGATGAGATGTATTGAGAATGAAACAGTTATTGAAAATTTT
CTTTCAGGAGCACCTTAAAAGCACAGATGGTGGATAGTTCATTCCACTTCTGAGGTTAAT
AAGTCATTATGAAAGCAATTTCTTTAGAAAGACATTGAAAATAATACAGGCGAATGAGTT
AAGCCTTCTATTTTTAGAAAATAAAGTTGAAAATGATTAGTTGCTAAGTTAAATGAAAAG
AATATCAGAAATAGAGCAGGT

clustalw multiple alignements is not computed in this case