cluster # 4175

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Schistosoma mansoni
cluster # 4175 cluster # 4175 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4175#0 length = 597 sequences # 3

consensusID : consensus_4175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 597
fasta sequence

                              [ATCAAATAAGTGTAATTTACGATATAAGCCAACTAGTTCACCATCTGGATTGTATGTTGCACAACAGTTATATAACTTGCCATCAGGTCCACGTTCAGGAGTAGAACCACCGACAAGCCATATTTTATGTAATTTAGCAGCATCTGATAGCATTTGGCATGATGGACCGTTTGGAACAG-CTTC-AGCATAGGGTCCAAAATATTTT-GCACCAATGGGGGAGGTAAAGCATTCTGGTAAGCATACAAGATGAGGTGAATGCTCAGACACAGCTCGACTAATTAATTCAGAAGCACGTTTTATATTGGCAGGTTTATCTGCACCCACAAACATTTGCACTAGCGCCAGTCGTAACATTTTTACAATCTATTTGAACTTTCTATGAATCAACCTTGAAAATCTAATCCTCCCACAAATGTCACCATTTGACTTGTTAATTGTCCCTTAGTTAAATATTTCAGAATCCATTAATGAGGTTTGAATGAGTATGTTTTACCTAAAAATTACTGGTTTTTTCCACATATTCTCAGATATTTGACTAAATAACTGAGTCACTCCATCACTATATCTACTGGGGTTAGGGTGGCCTGGTTACATCAC]

[+] EMBL CD133682             [ATCAAATAAGTGTAATTTACGATATAAGCCAACTAGTTCACCATCTGGATTGTATGTTGCACAACAGTTATATAACTTGCCATCAGGTCCACGTTCAGGAGTAGAACCACCGACAAGCCATATTTTATGTAATTTAGCAGCATCTGATAGCATTTGGCATGATGGACCGTTTGGAACAG CTTC AGCATAGGGTCCAAAATATTTT GCACCAATGGGGGAGGTAAAGCATTCTGGTAAGCATACAAGATGAGGTGAATGCTCAGACACAGCTCGACTAATTAATTCAGAAGCACGTTTTATATTGGCAGGTTTATCTGCACCCACAAACATTTGCACTAGCGCCAGTCGTAACATTTTTACAATCTATTTGAA                                                                                                                                                                                                                                 ]
[-] EMBL SMAA69057            [                                                                                                                                                 GATAGCATTTGGCATGATGGACCGTTTGGAACAGACTTCTCGAATAGGGTCGAAAATATTTTCGCACCAATGGGGGAGGTAAAGCATTCTGGTAAGCATACAAGATGAGGTGAATGCTCAGACACAGCTCGACTAATTAATTCAGAAGAACGTTTTATATTGGCAGGTTTATCTGCACCCTCAAACATTTGCACTAGCGCCAGTCGTAACATTT                                                                                                                                                                                                                                                 ]
[+] EMBL CD117664             [                                                                                                                                                                                                                                                       AGATGAGGTGAATGCTCAGACACAGCTCGACTAATTAATTCAGAAGCACGTTTTATATTGGCAGGTTTATCTGCACCCACAAACATTTGCACTAGCGCCAGTCGTAACATTTTTACAATCCAGTAATACTTTCTATGAATCAACCTTGAAAATCTAATCCTCCCACAAATGTCACCATTTGACTTGTTAATTGTCCCTTAGTTAAATATTTCAGAATCCATTAATGAGGTTTGAATGAGTATGTTTTACCTAAAAATTACTGGTTTTTTCCACATATTCTCAGATATTTGACTAAATAACTGAGTCACTCCATCACTATATCTACTGGGGTTAGGGTGGCCTGGTTACATCAC]




>consensus_4175#0
ATCAAATAAGTGTAATTTACGATATAAGCCAACTAGTTCACCATCTGGATTGTATGTTGC
ACAACAGTTATATAACTTGCCATCAGGTCCACGTTCAGGAGTAGAACCACCGACAAGCCA
TATTTTATGTAATTTAGCAGCATCTGATAGCATTTGGCATGATGGACCGTTTGGAACAGC
TTCAGCATAGGGTCCAAAATATTTTGCACCAATGGGGGAGGTAAAGCATTCTGGTAAGCA
TACAAGATGAGGTGAATGCTCAGACACAGCTCGACTAATTAATTCAGAAGCACGTTTTAT
ATTGGCAGGTTTATCTGCACCCACAAACATTTGCACTAGCGCCAGTCGTAACATTTTTAC
AATCTATTTGAACTTTCTATGAATCAACCTTGAAAATCTAATCCTCCCACAAATGTCACC
ATTTGACTTGTTAATTGTCCCTTAGTTAAATATTTCAGAATCCATTAATGAGGTTTGAAT
GAGTATGTTTTACCTAAAAATTACTGGTTTTTTCCACATATTCTCAGATATTTGACTAAA
TAACTGAGTCACTCCATCACTATATCTACTGGGGTTAGGGTGGCCTGGTTACATCAC

clustalw multiple alignements is not computed in this case