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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4281 cluster # 4281       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4281#0 length = 1042 sequences # 3  

consensusID : consensus_4281#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1042
fasta sequence
                              [CTCGAGGGCCAGAATTCGGCACGAGGATTAATTTGTGCGTACTATGATTGTTAAATCTTCCGGCTATCTATGATCACAGGACTTTACCGAACAAATAGTTTTCAATCCTTGTATAATTTTCGTCGTTTGGTTTCATCTCAAACACATTATGATACATTAGGAATTGGAAAATCCGCTTCGTATAGTGAAATTCGTTCAGCTTTTATCGAACTATCGAAAAAATATCATCCTGATAAAAATGACGGTGATATTGAGATGTTTAAAAGGATCAACGAAGCGTACTCTGTTCTTTCTCAAGAGAAAAGTAGACGAATTTACGATTTCTCTTTAGCATCAAGAGCTAAACCATCATTCACTAACTCGCCAAATGAGTACGACGTTTCAAATTGGGAGCGTGATTTTAATTTCCACTTACGTGCTATGCGTTTTGGGGGAAATAAATGCAACACTAAAAGAAACCCTAATATATCACGATCGATTTTCATTTCAACAACACTAATAGCAGTGTTCACCTACTTTATTTCTATATATACATTTATTAAAAACAAACAATATGCGAGCTTTTATACTCGGGCATACCACGAACGATTCATCCAGTATAATCAACATCATGACGATGGTTTGACAAGCTTANAAGANAATTCATATGAAGATTTCGAAGATTGAATAGCCAATATTATTTGTATCTTTACGGCATGAGAAATTCCTATACTTCTTGATTCGTTGTTTAACTTATAGGATAGGTTGTAAACATCATTTTGTTTTCTGGTCATCCTCTTATCATCATTACTATTCCATACGTTTTTTAAATTTTTGGAATTGTTTCAATACCTGACATTGTCACTTAAATTTGCACTAGTTTAGTTTCAACTATGTTTTAGTATTTCATGAAAAATATTGAATTTTATAAAACTGCTACCCTTTAGCACGTAACTTTTGTCAAACAACTTTCATTTGTTTAGATGTTAAGTAATACTCTATAAATTTTCCATTGAACTTTTTTAAATGGCAGAAATTTCGTATTATTTCGCTTGAATACTAT]

[+] EMBL CD080486             [CTCGAGGGCCAGAATTCGGCACGAGGATTAATTTGTGCGTACTATGATTGTTAAATCTTCCGGCTATCTATGATCACAGGACTTTACCGAACAAATAGTTTTCAATCCTTGTATAATTTTCGTCGTTTGGTTTCATCTCAAACACATTATGATACATTAGGAATTGGAAAATCCGCTTCGTATAGTGAAATTCGTTCAGCTTTTATCGAACTATCGAAAAAATATCATCCTGATAAAAATGACGGTGATATTGAGATGTTTAAAAGGATCAACGAAGCGTACTCTGTTCTTTCTCAAGAGAAAAGTAGACGAATTTACGATTTCTCTTTAGCATCAAGAGCTAAACCATCATTCACTAACTCGCCAAATGAGTACGACGTTTCAAATTGGGAGCGTGATTTTAATTTCCACTTACGTGCTATGCGTTTTGGGGGAAATAAATGCAACACTAAAAGAAACCCTAATATATCACGATCGATTTTCATTTCAACAACACTAATAGCAGTGTTCACCTACTTTATTTCTATATATACATTTATTAAAAACAAACAATATGCGAGCTTTTATACTCGGGCATACCACGAACGATTCATCCAGTATAATCAACATCATGACGATGGTTTGACAAGCTTANAAGANAATTCATATGAA                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI975798             [                                                                            CAGGACTTTACCGAACAAATAGTTTTCAATCCTTGTATAATTTTCGTCGTTTGGTTTCATCTCAAACACATTATGATACATTAGGAATTGGAAAATCCGCTTCGTATAGTGAAATTCGTTCAGCTTTTATCGAACTATCGAAAAAATATCATCCTGATAAAAATGACGGTGATATTGAGATGTTTAAAAGGATCAACGAAGCGTACTCTGTTCTTTCTCAAGAGAAAAGTAGACGAATTTACGATTTCTCTTTAGCATCAAGAGCTAAACCATCATTCACTAACTCGCCAAATGAGTACGACGTTTCAAATTGGGAGCGTGATTTTAATTTCCACTTACGTGCTATGCGTTTTGGGGGAAATAAATGCAACACTAAAAGAAACCCTAATATATCACGATCGATTTTCATTTCAACAACACTAATAGCAGTGTTCACCTACTTTATTTCTATATATACATTTATTAAAAACAAACAATATGCGAGCTTTTATACTCGGGCATACCACGAACGATTCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD074398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCCTAATATATCACGATCGATTTTCATTTCAACAACACTAATAGCAGTGTTCACCTACTTTATTTCTATATATACATTTATTAAAAACAAACAATATGCGAGCTTTTATACTCGGGCATACCACGAACGATTCATCCAGTATAATCAACATCATGACGATGGTTTGACAAGCTTAAAAGAAAATTCATATGAAGATTTCGAAGATTGAATAGCCAATATTATTTGTATCTTTACGGCATGAGAAATTCCTATACTTCTTGATTCGTTGTTTAACTTATAGGATAGGTTGTAAACATCATTTTGTTTTCTGGTCATCCTCTTATCATCATTACTATTCCATACGTTTTTTAAATTTTTGGAATTGTTTCAATACCTGACATTGTCACTTAAATTTGCACTAGTTTAGTTTCAACTATGTTTTAGTATTTCATGAAAAATATTGAATTTTATAAAACTGCTACCCTTTAGCACGTAACTTTTGTCAAACAACTTTCATTTGTTTAGATGTTAAGTAATACTCTATAAATTTTCCATTGAACTTTTTTAAATGGCAGAAATTTCGTATTATTTCGCTTGAATACTAT]


>consensus_4281#0 CTCGAGGGCCAGAATTCGGCACGAGGATTAATTTGTGCGTACTATGATTGTTAAATCTTC CGGCTATCTATGATCACAGGACTTTACCGAACAAATAGTTTTCAATCCTTGTATAATTTT CGTCGTTTGGTTTCATCTCAAACACATTATGATACATTAGGAATTGGAAAATCCGCTTCG TATAGTGAAATTCGTTCAGCTTTTATCGAACTATCGAAAAAATATCATCCTGATAAAAAT GACGGTGATATTGAGATGTTTAAAAGGATCAACGAAGCGTACTCTGTTCTTTCTCAAGAG AAAAGTAGACGAATTTACGATTTCTCTTTAGCATCAAGAGCTAAACCATCATTCACTAAC TCGCCAAATGAGTACGACGTTTCAAATTGGGAGCGTGATTTTAATTTCCACTTACGTGCT ATGCGTTTTGGGGGAAATAAATGCAACACTAAAAGAAACCCTAATATATCACGATCGATT TTCATTTCAACAACACTAATAGCAGTGTTCACCTACTTTATTTCTATATATACATTTATT AAAAACAAACAATATGCGAGCTTTTATACTCGGGCATACCACGAACGATTCATCCAGTAT AATCAACATCATGACGATGGTTTGACAAGCTTANAAGANAATTCATATGAAGATTTCGAA GATTGAATAGCCAATATTATTTGTATCTTTACGGCATGAGAAATTCCTATACTTCTTGAT TCGTTGTTTAACTTATAGGATAGGTTGTAAACATCATTTTGTTTTCTGGTCATCCTCTTA TCATCATTACTATTCCATACGTTTTTTAAATTTTTGGAATTGTTTCAATACCTGACATTG TCACTTAAATTTGCACTAGTTTAGTTTCAACTATGTTTTAGTATTTCATGAAAAATATTG AATTTTATAAAACTGCTACCCTTTAGCACGTAACTTTTGTCAAACAACTTTCATTTGTTT AGATGTTAAGTAATACTCTATAAATTTTCCATTGAACTTTTTTAAATGGCAGAAATTTCG TATTATTTCGCTTGAATACTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)