cluster # 4418

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Schistosoma mansoni
cluster # 4418 cluster # 4418 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4418#0 length = 541 sequences # 3

consensusID : consensus_4418#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 541
fasta sequence

                              [ATTT-ACCTAATCTGTTAGGTTATTGTTCTACTTTCA-GTAACCACTTGACTTTATGCTGTTCTCAGTTCTGTTTTCTAAAATATTGATATGCTTGAACTAAATCGATTCCGCGGTAACGAGGGA-GAGCTAATGACACAATGACACGATAAGCTATTGTAATCTGTTGTCCCAGGCCCCGCTAACTAGATGAA-GAAGTCCAAGGCAAGTAGGGGAATAT--ATGTATTCCGTAAGCAGCCGAGTACAAGCAATCAAATGAGGGAAAAAGTCAAGCGCATTTATACAGCAACAAATTGTCCTTGAGCATCATAAATAAATAGCACACGCAAAGAGAAAATGGACCAATAGCGTTTAAGATAGTTTACAAGTGGGAAATATGACGTCAATTTAAAAAGAGCGCGTTTGGCGCGGAAACAACTAAATTCAAATTTTCAAAATAAAATTACAAAACTAAGCCATTTACCAAGTAAGTTCTGGGGATTTGACATCCCCAACACCTCCCCTTTTTAAGAAATCCGAGCTCCTCCTCCCCCCCGAAATAGTG]

[-] EMBL CD162180             [ATTT ACCTAATCTGTTAGGTTATTGTTCTACTTTCAGGTAACCACTTGACTTTATGCTGTTCTCAGTTCTGTTTTCTAAAATATTGATATGCTTGAACTAAATCGATTCCGCGGTAACGAGGGAGGAGCTAATGACACAATGACACGATAAGCTATTGTAATCTGTTGTCCCAGGCCCCGCTAACTAGATGAAGGAAGTCCAAGGCAAGTAGGGGAATAT  ATGTATTCCGTAAGCAGCCGAGTACAAGCAATCAAATGAGGGAAAAAGTCAAGCGCATTTATACAGCAACAAATTGTCCTTGAGCATCATAAATAAATAGCACACGCAAAGAGAA                                                                                                                                                                                                                 ]
[-] EMBL CD162175             [ATTTCACATAATCTGTTAGGTTATTGTTCTACTTTCA GTAACCACTTGACTTTATGCTGTTCTCAGTTCTGTTTTCTAAAATATTGATATGCTTGAACTAAATCGATTCCGCGGTAACGAACGA AAGCTAATGACACAATGACACGATAAGCTATTCTAATCTGTTGTCCCAGGCCCCGCTAACTAGATGAA GAAGTCCAAGGCAAGTAGGGGAATAT  ATGTATTCCGTAAGCAGCCGAGTACAAGCAATCAAATGAGGGAAAAAGTCAAGCGCATTTATACAGCAACAAATTGTCCTTGAGCATCATAAATAA                                                                                                                                                                                                                                    ]
[+] EMBL CD160560             [                                                                                                                                                                                                AA GAAGTCCAAGGCAAGTAGGGGAATATACATGTATTCCGTAAGCAGCCGAGTACAAGCAATCAAATAAGGGAAAAAGTCAAGCGCATTTATACAACAACAATTTGTCCTTGAGCATCATTGGTAAACAGCACACACAAAGAAACAATGGACCAATAGCGTTTAAGATAGTTTACAAGTGGGAAATATGACGTCAATTTAAAAAGAGCGCGTTTGGCGCGGAAACAACTAAATTCAAATTTTCAAAATAAAATTACAAAACTAAGCCATTTACCAAGTAAGTTCTGGGGATTTGACATCCCCAACACCTCCCCTTTTTAAGAAATCCGAGCTCCTCCTCCCCCCCGAAATAGTG]




>consensus_4418#0
ATTTACCTAATCTGTTAGGTTATTGTTCTACTTTCAGTAACCACTTGACTTTATGCTGTT
CTCAGTTCTGTTTTCTAAAATATTGATATGCTTGAACTAAATCGATTCCGCGGTAACGAG
GGAGAGCTAATGACACAATGACACGATAAGCTATTGTAATCTGTTGTCCCAGGCCCCGCT
AACTAGATGAAGAAGTCCAAGGCAAGTAGGGGAATATATGTATTCCGTAAGCAGCCGAGT
ACAAGCAATCAAATGAGGGAAAAAGTCAAGCGCATTTATACAGCAACAAATTGTCCTTGA
GCATCATAAATAAATAGCACACGCAAAGAGAAAATGGACCAATAGCGTTTAAGATAGTTT
ACAAGTGGGAAATATGACGTCAATTTAAAAAGAGCGCGTTTGGCGCGGAAACAACTAAAT
TCAAATTTTCAAAATAAAATTACAAAACTAAGCCATTTACCAAGTAAGTTCTGGGGATTT
GACATCCCCAACACCTCCCCTTTTTAAGAAATCCGAGCTCCTCCTCCCCCCCGAAATAGT
G

clustalw multiple alignements is not computed in this case