cluster # 4485

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Schistosoma mansoni
cluster # 4485 cluster # 4485 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4485#0 length = 728 sequences # 3

consensusID : consensus_4485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 728
fasta sequence

                              [CTCCAGGCCANAATTCGGCACGAGG-CTTTTTTCCCATTGTGAACAAATAGTCTTAAGAAAGATCGTGAATATAGTTTATAGTCATATCAACTACCAACTAATGAATATGTTACCATTTCAAAAATTATCTTTTGTTATTTTAACAACTCTCTATTTATCACTACCATGGATCATATCCATGGTGAATACGTTACCAGCAACGAATAACAATGATCCAAATATTCTATATCGTTTCCCACCATCATCATCAGGATCATTATCACATCAAAATGGAGTAGAAAGAGTTTATTTACCAGAAGAACTTCTTGCACAACTGTCAAATGATCCATATTTCAATTCAATGTATTTACCAAAACGAGCTGCTTACATGGATTTACCATGGGGTAAACGTGCTTTAGCTAAACGTGCAGCTTATATTGATTTACCATGGGGTTAATTTTGAAATTAATTCAACACTTTATACCAAATTACATACATACATACATACATTACTTTAATAATACATACTATACTATTCACTGAGAACACTCTATCTATCAGTCATTATAACTAATCATTAATAGACTGAAGGTGAAATGTAAGACTATTGGAAAGTTAAAACAAAATATATATACTGTCGATATTCTATAATTCATTGGTTCTATGAAAACTTTGTACTTTCAACAATGGAAACAATCTTTCATAGTGTTCATTNTAAACAATGAATTAGTTCTTCAATCNATAATAAT]

[+] EMBL CD080190             [CTCCAGGCCANAATTCGGCACGAGG CTTTTTTCCCATTGTGAACAAATAGTCTTAAGAAAGATCGTGAATATAGTTTATAGTCATATCAACTACCAACTAATGAATATGTTACCATTTCAAAAATTATCTTTTGTTATTTTAACAACTCTCTATTTATCACTACCATGGATCATATCCATGGTGAATACGTTACCAGCAACGAATAACAATGATCCAAATATTCTATATCGTTTCCCACCATCATCATCAGGATCATTATCACATCAAAATGGAGTAGAAAGAGTTTATTTACCAGAAGAACTTCTTGCACAACTGTCAAATGATCCATATTTCAATTCAATGTATTTACCAAAACGAGCTGCTTACATGGATTTACCATGGGGTAAACGTGCTTTAGCTAAACGTGCAGCTTATATTGATTTACCATGGGGTTAATTTTGAAATTAATTCAACACTTTATACCAAATTACATACATACATACATACATTACTTTAATAATACATACTATACTATTCACTGAGAACACTCTATCTATCAGTCATTATAACTAATCATTAATAGACTGAAGGTGAAATGTAAGACTATTGGAAAGTTAAAACAAAATATATATACTGTCGATATTCTATAATTCATTGGTTCTATGAAAACTTTGTACTTTCAACAATGGAAACAATCTTTCATAGTGTTCATTNTAAACAATGAATTAGTTCTTCAATCNATAATAAT]
[+] EMBL CD080238             [  tcgaGCCAANATTCGGCACGAGGCCTTTTTTCCCATTGTGAAC AATAGTCTTAAGAAAGATCGTGAATATAGTTTATAGTCATATCAACTACCAACTAATGAATATGTTACCATTTCAAAAATTATCTTTTGTTATTTTAACAACTCTCTATTTATCACTACCATGGATCATATCCATGGTGAATACGTTACCAGCAACGAATAACAATGATCCAAATATTCTATATCGTTTCCCACCATCATCATCAGGATCATTATCACATCAAAATGGAGTAGAAAGAGTTTATTTACCAGAAGAACTTCTTGCACAACTGTCAAATGATCCATATTTCAATTCAATGTATTTACCAAAACGAGCTGCTTACATGGATTTACCATGGGGTAAACGTGCTTTAGCTAAACGTGCAGCTTATATTGATTTACCATGGGGTTAATTTTGAAATTAATTCAACACTTTATACCAAATTACATACATACATACATACATTACTTTAATAATACATACTATACTATTCACTGAGAACACTCTATCTATCAGTCATTATAACTAATCATTAATAGACTGAAGGTGAAATGTAAGACTATTGGAAAGTTAAAACAAAATATATATACTGTCGATATTCTATAATTCATTGGTTCTATGAAAACTTTGTACTTTCAACAATGGAAACAATCTTTCATAGTGTTCATTNTAAACAATGAATTAGTTCTTCAATCNATAATAAT]
[-] EMBL CD112183             [                                                    CTTAAGAAAGATCGTGAATATAGTTTATAGTCATATCAACTACCAACTAATGAATATGTTACCGTTTCAAAAATTATCTTTTGTTATTTTAACAACTCTCTATTTATCACTACCATGGATCATATCCATGGTGAATACGTTACCAGCAACGAATAACAATGATCCAAATATTCTATATCGTTTCCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_4485#0
CTCCAGGCCANAATTCGGCACGAGGCTTTTTTCCCATTGTGAACAAATAGTCTTAAGAAA
GATCGTGAATATAGTTTATAGTCATATCAACTACCAACTAATGAATATGTTACCATTTCA
AAAATTATCTTTTGTTATTTTAACAACTCTCTATTTATCACTACCATGGATCATATCCAT
GGTGAATACGTTACCAGCAACGAATAACAATGATCCAAATATTCTATATCGTTTCCCACC
ATCATCATCAGGATCATTATCACATCAAAATGGAGTAGAAAGAGTTTATTTACCAGAAGA
ACTTCTTGCACAACTGTCAAATGATCCATATTTCAATTCAATGTATTTACCAAAACGAGC
TGCTTACATGGATTTACCATGGGGTAAACGTGCTTTAGCTAAACGTGCAGCTTATATTGA
TTTACCATGGGGTTAATTTTGAAATTAATTCAACACTTTATACCAAATTACATACATACA
TACATACATTACTTTAATAATACATACTATACTATTCACTGAGAACACTCTATCTATCAG
TCATTATAACTAATCATTAATAGACTGAAGGTGAAATGTAAGACTATTGGAAAGTTAAAA
CAAAATATATATACTGTCGATATTCTATAATTCATTGGTTCTATGAAAACTTTGTACTTT
CAACAATGGAAACAATCTTTCATAGTGTTCATTNTAAACAATGAATTAGTTCTTCAATCN
ATAATAAT

clustalw multiple alignements is not computed in this case