These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4617#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 659 fasta sequence [AAAGTCCACAAGCTGACCATT-GCAG--ACGTCCGTG-CCGAGG-ACCAGGGTCAATATACCTGCAAGCACAAGGACCTCGAAACTTCAGCGGAGCTCAAGATTGAAGCTGAACCAATTCAGTTTACAAAGCGCATACAGAACATTGTGGTGAGTGAGCATCAGTCGGCTACTTTTGAGTGTGAAGTGTCCTTTGATGACGCCATAGTGACCTGGTACAAAGGACCAACGGAGCTGATTGAGAGCCAGAAATACAACTTTAGGAATGATGGCCGCTGCCATTACATGACCATCCACAATGTGACCCCAGATGACGAAGGCGTCTATTCAGTAATTGCCCGACTGGAGCCCAGAGGGGAAGCAAGAAGCACAGCAGAGCTGTACTTAACAACTAAAGAAATAAAACTTGAGATGAAGCCTCCTGATATTCCTGATTCCAGAGTTCCAATACCAACCATGCCTATCAGAGCAGTTCCACCTGAAGAAATCCCTCCTGCAGTTGCTCCTTCTATCCCTCTTCTTCTGCCATTACCTGAAGAGAAGAAGCCACCAGGAAAGCGTATTGAAGTTACCAAAAAAGCTGTGAAGAAAGACACCAAAAAAGTTGTCACCAAGCCCAAGGAAGAGGCACCACCACCAGTGCCAGAAGTTGCCAAGAAGCCCCT] [+] EMBL CD167985 [AAAGTCCACAAGCTGACCATT GTAG ACGTCCGTG CCGAGG ACCAGGGTCAATATACCTGCAAGCACAAGGACCTCGAAACTTCAGCGGAGCTCAAGATTGAAGCTGAACCAATTCAGTTTACAAAGCGCATACAGAACATTGTGGTGAGTGAGCATCAGTCGGCTACTTTTGAGTGTGAAGTGTCCTTTGATGACGCCATAGTGACCTGGTACAAAGGACCAACGGAGCTGATTGAGAGCCAGAAATACAACTTTAGGAATGATGGCCGCTGCCATTACATGACCATCCACAATGTGACCCCAGATGACGAAGGCGTCTATTCAGTAATTGCCCGACTGGAGCCCAGAGGGGAAGCAAGAAGCACAGCAGAGCTGTACTTAACAACTAAAGAAATAAAACTTGAGATGAAGCCTCCTGATATTCCTGATTCCAGAGTTCCAATACCAACCATGCCTATCAGAGCAGTTCCACCTGAAGAAATCCCTCCTGCAGTTGCTCCTTCTATCCCTCTTCTTCTGCCATTACCTGAAGAGAAGAAGCCACCAGGAAAGCGTATTGAAGTTACCAAAAAAGCTGTGAAGAAAGACACCAAAAAAGTTGTCACCAAGCCCAAGGAAGAGGCACCACCACCAGTGCCAGAAGTTGCCAAGAAGCCCCT] [-] EMBL CD167947 [ AAGTCCACAAGCTGACCATT GCAG ACGTCCGTG CCGAGG ACCAGGGTCAATATACCTGCAAGCACAAGGACCTCGAAACTTCAGCGGAGCTCAAGATTGAAGCTGAACCAATTCAGTTTACAAAGCGCATACAGAACATTGTGGTGAGTGAGCATCAGTCGGCTACTTTTGAGTGTGAAGTGTCCTTTGATGACGCCATAGTGACCTGGTACAAAGGACCAACGGAGCTGATTGAGAGCCAGAAATACAACTTTAGGAATGATGGCCGCTGCCATTACATGACCATCCACAATGTGACCCCAGATGACGAAGGCGTCTATTCAGTAATTGCCCGACTGGAGCCCAGAGGGGAAGCAAGAAGCACAGCAGAGCTGCACTTAACAACTAAAGAAATAAAACTTGAGATGAAGCCTCCTGAT ] [+] EMBL CD168188 [ ctgGACCATTGGCAGANACGTCCGTGCCCGAGGAACCAGGGTCAATATACCTGCAAGCACAAGGACCTCGAAACTTCAGCGGAGCTCAAGATTGAAGCTGAACCAATTCAGTTTACAAAGCGCATACAGAACATTGTGGTGAGTGAGCATCAGTCGGCTACTTTTGAGTGTGAAGTGTCCTTTGATGACGCCATAGTGACCTGGTACAAAGGACCAACGGAGCTGATTGAGAGCCAGAAATACAACTTTAGGAATGATGGCCGCTGCCATTACATGACCATCCACAATGTGACCCCAGATGACGAAGGCGTCTATTCAGTAATTGCCCGACTGGAGCCCAGAGGGGAAGCAAGAAGCACAGCAGAGCTGTACTTAACAACTAAAGAAATAAAACTTGAGATGAAGC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||