Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4623 cluster # 4623       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4623#0 length = 880 sequences # 3  

consensusID : consensus_4623#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 880
fasta sequence
                              [ACTCTCCACGCACATCGCCGACACAGTCTCTCTCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGGTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCTACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTTTAATCCTTGTAGAATTAAATGATTTTCATTTACTTCTAATCGACTATCTCCTACTCCAATTAATGATGTTGTATCCACGGGTGTACCATCTAAACGACTGAATTCCCAACCGTATAATACAGATTCCTTGGTACGTTGTTTAGTTGAACGATCTGTAGCAATACATTCTAATTTTACTGAAGAACCTTCAGTGCCAGATAGTCTTCCATGATCATCTAAACCAATGACACTCACAGAAAGACGATTTAATTTTTCTCTATCTTTCACATCTTTCACATGATCTACTGGAATTTCTTCTGGATAAACTATTAAATCTACAAGTGTACTATAATATGTCACTCCATCATTATATGATGTAGCTAAAC]

[-] EMBL CD135685             [ACTCTCCACGCACATCGCCGACACAGTCTCTCTCAGATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCATGGTGGGTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCTACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGC                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD168465             [            nncananctCACAGTCTCTCTCACATCGTATCATTGAACATGATGTAGCATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAGATGCAGAGGACGATGAGTCGAATTGCAAGGTGGTTGACGGTTGGAGCGACTACTCCTCAGAATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGAGTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTTCAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD061444             [                                                                                                                                                                                                                                                                                                                                                                    ACGAGAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCAACTGCGTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTTGAGGAGAGTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTTTAATCCTTGTAGAATTAAATGATTTTCATTTACTTCTAATCGACTATCTCCTACTCCAATTAATGATGTTGTATCCACGGGTGTACCATCTAAACGACTGAATTCCCAACCGTATAATACAGATTCCTTGGTACGTTGTTTAGTTGAACGATCTGTAGCAATACATTCTAATTTTACTGAAGAACCTTCAGTGCCAGATAGTCTTCCATGATCATCTAAACCAATGACACTCACAGAAAGACGATTTAATTTTTCTCTATCTTTCACATCTTTCACATGATCTACTGGAATTTCTTCTGGATAAACTATTAAATCTACAAGTGTACTATAATATGTCACTCCATCATTATATGATGTAGCTAAAC]


>consensus_4623#0 ACTCTCCACGCACATCGCCGACACAGTCTCTCTCAGATCGTATCATTGAACATGATGTAG CATTGTCATCAGGGTTCACTAGTGATCTGAGAGAGACTGTGAGCGTGGGCGTTGGTAAAG ATGCAGAGGACGATGAGTCGAATTGCATGGTGGGTGACGGTTGGAGCGACTACTCCTCAG AATGCATACACGACGAGCACAAGCCTAGTGTGTCGGTTGGTTCTCCGACCAGACTTGTGA GTGTGGAGACTCAAGCGACAGACAGCGTGTCTTGGTTGGCTACTGACACATTGTCAACTT CAGGATTTACCTATCCGTCGACCGTAGACCAGTCGACCATGAGTGCAGTGGAGATGACGA GAGAGAAGCTAGTGAGTTCAAGTTTGTGTGAAGATAAGTCGAATGTGGTTGGTCTACTGC GTGAAGAGTTGGCGTCTTGTTATGAACAGATAGTGAAGCTGTCTAAATCGGTAGAGGAGA GTGATGCTTCGTTGATGGATGTTCGGCGTTTGTTTTAATCCTTGTAGAATTAAATGATTT TCATTTACTTCTAATCGACTATCTCCTACTCCAATTAATGATGTTGTATCCACGGGTGTA CCATCTAAACGACTGAATTCCCAACCGTATAATACAGATTCCTTGGTACGTTGTTTAGTT GAACGATCTGTAGCAATACATTCTAATTTTACTGAAGAACCTTCAGTGCCAGATAGTCTT CCATGATCATCTAAACCAATGACACTCACAGAAAGACGATTTAATTTTTCTCTATCTTTC ACATCTTTCACATGATCTACTGGAATTTCTTCTGGATAAACTATTAAATCTACAAGTGTA CTATAATATGTCACTCCATCATTATATGATGTAGCTAAAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)