These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_473#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 138 fasta sequence [ACAATGGCTACTAAGAACACGATGTGAGTGACTGTTTCATTTTCCAAATTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTG] [+] EMBL CD128566 [ACAATGGCTACTAAGAACACGATGTGAGTGACTGTTTCATTTTCCAAATTGTTGTTGTTGTTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTGTAGTGTTTCTGGTAGGTG] consensusID : consensus_473#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 116 fasta sequence [GCTGCCTGCGAGGTCGACTTTAGAAGGATCCCCCGGTGGCGTAACCAATGGCTACTAAAAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTACTGGGT] [+] EMBL CD126456 [GCTGCCTGCGAGGTCGACTTTAGAAGGATCCCCCGGTGGCGTAACCAATGGCTACTAAAAAGACGAGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGTGTTGTTGTACTGGGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_473#0 ACAATGGCTACTAAGAACACGATGTGAGTGACTGTTTCATTTTCCAAATTGTTGTTGTTG 60 consensus_473#1 --GCTGCCTGCGAGGTCGAC--TTTAGAAGGATCCCCCGGTGGCGTAACCAATG--GCTA 54 ** ** * * * ** * * * * * * * ** ** * * consensus_473#0 TTGAATAGATGTAATAGTTTGGAGTTTATGTGTTGATGTGAATGTTGGTAAATTGTTGTG 120 consensus_473#1 CTAAAAAGACG--AGTGTGAGTGACTGTTTCATTTTTCAAATTGTTGGT--GTTGTTGTA 110 * ** *** * * ** * * * ** * * ******* ******* consensus_473#0 TAGTGTTTCTGGTAGGTG 138 consensus_473#1 CTGGGT------------ 116 * ** |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||