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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4911 cluster # 4911       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4911#0 length = 470 sequences # 3  

consensusID : consensus_4911#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 470
fasta sequence
                              [CANCANANNCAATTCCTCATCATCCACCAAAACCAGATGATATCTTTGGAATTTGTTATACAAGTGGTACAACTGGTTTACCAAAGGGTGCGATGTTAACTAATAAAAACATCGTTTGTCTTGTACAATCCGCTTCAGAATTCTTTCGACCTGTTTTTACCGATTTGGAAACATTAATTTCCTATTTACCATTAGCACACTCCTATGAACAAACAATCGAACTCTATTGTCTTTGCAATGGTTTCAAGATCGGTTATTACTTAGGAGATGTTCGTCAATTGGCAGATGATCTTGCGAAATTAAAACCAACATTAATGCCATGTGTACCACGTCTTCTCAATCGAATGTATGATAATATTCAAGCAACGATTCGTCAATTGAGTCCTCTTAAACGTTATCTTTTCGACATGGCTCTTTCAGCTAAAGGAAATGATGTTGATAAACATCGTGTTACACGACATATGACCTGN]

[-] EMBL CD091006             [CANCANANNCAATTCCTCATCATCCACCAAAACCAGATGATATCTTTGGAATTTGTTATACAAGTGGTACAACTGGTTTACCAAAGGGTGCGATGTTAACTAATAAAAACATCGTTTGTCTTGTACAATCCGCTTCAGAATTCTTTCGACCTGTTTTTACCGATTTGGAAACATTAATTTCCTATTTACCATTAGCACACTCCTATGAACAAACAATCGAACTCTATTGTCTTTGCAATGGTCTCAAGATCGGTTATTACTTAGGAGATGTTCGTCAATTGGCAGATGATCTTGCGAAATTAAAACCAACATTAATGCCATGTGTACCACGTCTTCTCAATCGAATGTATGATAATATTCAAGCAACGATTCGTCAATTGAGTCCTCTTAAACGTTATCTTTTCGACATGGCTCTTTCAGCTAAAGGAAATGATGTTGATAAACATCGTGTTA                 ]
[-] EMBL CD091019             [ ggcagagcCAATTCCTCATCATCCACCAAAACCAGATGATATCTTTGGAATTTGTTATACAAGTGGTACAACTGGTTTACCAAAGGGTGCGATGTTAACTAATAAAAACATCGTTTGTCTTGTACAATCCGCTTCAGAATTCTTTCGACCTGTTTTTACCGATCTGGAAACATTAATTTCCTATTTACCATTAGCACACTCCTATGAACAAACAATCGAACTCTATTGTCTTTGCAATGGTTTCAAGATCGGTTATTACTTAGGAGATGTTCGTCAATTGGCAGATGATCTTGCGAAATTAAAACCAACATTAATGCCATGTGTACCACGTCCTCTCAATCGAATGTATGATAATATTCAAGCAACGATTCGTCAATTGAGTCCTCTTAAACGTTATCTTTTCGACATGGCTCTTTCAGCTAAAGGAAATGATGTTGATAAACATCGTGTTA                 ]
[+] EMBL CD091018             [           ATTCCTCATCATCCACCAAAACCAGATGATATCTTTGAAATTTGTTATACAAGTGGTACAACTGGTTTACTAAAGGGTGCGATGTTAACTAATAAAAACATCGTTTGTCTTGTACAATCCGCTTCAGAATTCTTTCGACCTGTTTTTACCGATTTGGAAACATTAATTTCCTATTTACCATTAGCACACTCCTATGAACAAACAATCGAACTCTATTGTCTTTGCAATGGTTTCAAGATCGGTTATTACTTAGGAGATGTTCGTCAATTGGCAGATGATCTTGCGAAATTAAAACCAACATTAATGCCATGTGTACCACGTCTTCTCAATCGAATGTATGATAATATTCAAGCAACGATTCGTCAATTGAGTCCTCTTAAACGTTATCTTTTCGACATGGCTCTTTCAGCTAAAGGAAATGATGTTGATAAACATCGTGTTACACGACATATGACCTGN]


>consensus_4911#0 CANCANANNCAATTCCTCATCATCCACCAAAACCAGATGATATCTTTGGAATTTGTTATA CAAGTGGTACAACTGGTTTACCAAAGGGTGCGATGTTAACTAATAAAAACATCGTTTGTC TTGTACAATCCGCTTCAGAATTCTTTCGACCTGTTTTTACCGATTTGGAAACATTAATTT CCTATTTACCATTAGCACACTCCTATGAACAAACAATCGAACTCTATTGTCTTTGCAATG GTTTCAAGATCGGTTATTACTTAGGAGATGTTCGTCAATTGGCAGATGATCTTGCGAAAT TAAAACCAACATTAATGCCATGTGTACCACGTCTTCTCAATCGAATGTATGATAATATTC AAGCAACGATTCGTCAATTGAGTCCTCTTAAACGTTATCTTTTCGACATGGCTCTTTCAG CTAAAGGAAATGATGTTGATAAACATCGTGTTACACGACATATGACCTGN



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)