cluster # 5008

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Schistosoma mansoni
cluster # 5008 cluster # 5008 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5008#0 length = 717 sequences # 3

consensusID : consensus_5008#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 717
fasta sequence

                              [AAATGTATCAAAATATAAAACTACAGAATCTTTTAGTAAAATCTGAGAACCATACAGTAAATACTTAATTTGCTAAATATCCATCATTCGTGTTAGATATCATCTCATTTATGGTTGTAGTTCCATACTTCAGAGAAGTCTAGATAAGTCCCCTATATTTCAATAGTTCTTCAATAGAAGTGTGCACTCCCAACTTACACACAGGATAGAACACAAGACCTTCAGACCACGCTGAAAGCGATTTATATTAAACCCATTGTACTGAAATTTAACAGTCCATATTTCAAACTTCAATCTTCCAGAGATATGGTTTAATAATCATCCAACGTCATTAAAAATGATTGACCGACTAAATGTTGACATATATAAGCTTCATGGGTCACGACTTATTGTTGGAAACTTGTGAAATTTATCTCGAAGTTAATCACTTCACTTGGAAGTAGAGGTAATAATTTGGATTAATTCCCACAAAAAAATATTTGCTGAGAGATTAA-GTGATAGGAGAAATGCAAATGTGGGTTAAATAAACGTTTATA-AACGTATCAGAATGAAAGTAATTAAATCAAATTCAATTTGAAATGTGGAAAGGAACAATATATGTGTAGACCACGAGTATTGAGTAGCCTTGTAATACAGGAATCCTGAATGAATTTTTGAACCAGAGGTAGAGACAAGGTAGAAAAAATCGA-TCAATTCATTTCTTTTC-GA-TGTACAGTC]

[+] EMBL CD160295             [AAATGTATCAAAATATAAAACTACAGAATCTTTTAGTAAAATCTGAGAACCATACAGTAAATACTTAATTTGCTAAATATCCATCATTCGTGTTAGATATCATCTCATTTATGGTTGTAGTTCCATACTTCAGAGAAGTCTAGATAAGTCCCCTATATTTCAATAGTTCTTCAATAGAAGTGTGCACTCCCAACTTACACACAGGATAGAACACAAGACCTTCAGACCACGCTGAAAGCGATTTATATTAAACCCATTGTACTGAAATTTAACAGTCCATATTTCAAACTTCAATCTTCCAGAGATATGGTTTAATAATCATCCAACGTCATTAAAAATGATTGACCGACTAAATGTTGACATATATAAGCTTCATTGGTCACGACTTATTGTCGGAAACTTGTGAAATT                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD160113             [                                                                                                                                                                                                                                                                                                                                                  TGATTGACGGACTAAATGTTGACATATATAAGCTTCATGGGTCACGACTTATTGTTGGAAACTTGTGAAATTTATCTCGAAGTTAATCACTTCACTTGGAAGTAGAGGTAATAATTTGGATTAATTCCCACAAAAAAATATTTGCTGAGAGATTAA GTGATAGGAGAAATGCAAATGTGGGTTAAATAAACGTTTATA AACGTATCAGAATGAAAGTAATTAAATCAAATTCAATTTGAAATGTGGAAAGGAACAATATATGTGTAGACCACGAGTATTGAGTAGCCTTGTAATACAGGAATCCTGAATGAATTTTTGAACCAGAGGTAGAGACAAGGTAGAAAAAATCGA TCAATTCATTTCTTTTC GA TGTACAGTC]
[-] EMBL CD160064             [                                                                                                                                                                                                                                                                                                                                                                         ATATATAAGCTTCATAGGTCACGACTTATTGTTGGAAACTTGTGAAATTTATCTCGAAGTTAATCACTTCACTTGGAAGTAGAGGTAATAATATGGATTAATTCCCACAACAAAATATTTGCTGAGAGATTAATGTGATAGGAGAAATGCAAATGTGGGTTAAATAAACGTTTATACAACGTATCAGAATGAGAGTAATTAAATCAAATTCAAGTTGAAATGTGGAAAGGAACAATATATGTGTAGACCACGAGTATTGAGTAGCCTAGTAATACAGGAATCCTGAATGAAATGTTGAACCAGAGGTAGAGACAAGGTAGAAAATATCGAGTCAATTCATTTCTCTTCAGACTGTACAGTC]




>consensus_5008#0
AAATGTATCAAAATATAAAACTACAGAATCTTTTAGTAAAATCTGAGAACCATACAGTAA
ATACTTAATTTGCTAAATATCCATCATTCGTGTTAGATATCATCTCATTTATGGTTGTAG
TTCCATACTTCAGAGAAGTCTAGATAAGTCCCCTATATTTCAATAGTTCTTCAATAGAAG
TGTGCACTCCCAACTTACACACAGGATAGAACACAAGACCTTCAGACCACGCTGAAAGCG
ATTTATATTAAACCCATTGTACTGAAATTTAACAGTCCATATTTCAAACTTCAATCTTCC
AGAGATATGGTTTAATAATCATCCAACGTCATTAAAAATGATTGACCGACTAAATGTTGA
CATATATAAGCTTCATGGGTCACGACTTATTGTTGGAAACTTGTGAAATTTATCTCGAAG
TTAATCACTTCACTTGGAAGTAGAGGTAATAATTTGGATTAATTCCCACAAAAAAATATT
TGCTGAGAGATTAAGTGATAGGAGAAATGCAAATGTGGGTTAAATAAACGTTTATAAACG
TATCAGAATGAAAGTAATTAAATCAAATTCAATTTGAAATGTGGAAAGGAACAATATATG
TGTAGACCACGAGTATTGAGTAGCCTTGTAATACAGGAATCCTGAATGAATTTTTGAACC
AGAGGTAGAGACAAGGTAGAAAAAATCGATCAATTCATTTCTTTTCGATGTACAGTC

clustalw multiple alignements is not computed in this case