cluster # 5020

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Schistosoma mansoni
cluster # 5020 cluster # 5020 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5020#0 length = 826 sequences # 3

consensusID : consensus_5020#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 826
fasta sequence

                              [CTCGAGCCAANAATTCGGCACGAGGAGCACTCTCATTTGTTGATGAAGTTCATGCTGTTGGTTTATATGGTGCACATGGAGCTGGAGTTGCCGAACGTGATGGTCAGATGCATAGGATAGATGCAATTACGGGTACACTTGGAAAGGCTTTCGCTAGTATCGGAGGCTATTTAGCAGGAAGTTCTGAACTAGTTGATATGATCCGATCTTATGCTTCCGGATTTATATTTACTACTTCACTACCACCACATTCCTTGGCTGCTGCGCAAGCAAGTATTCAAATTTTGAAATCTCCTGAAGGAAAAGAACTTCGTACAGAACACCAAAAACGAGTATCTATTGTACGCCAAAGTCTCCGTCAAGCAGGATTGCCTGTGATTGAAGCGCCGTCACATATTATTCCGCTACATGTCGGTGAAGCAAAACTATGTACGAAAATATCGGAAGAACTATTATCCGAGCATAATATATATGTGCAGTCGATAAATTACCCAACTGTAGACATAGGAGATGAACGTTTGCGTATTGCACCCACACCGCATCATACAGATAAACTAACTGAAGAACTAGTAGATTCTTTATGTATGGTATGGAAAAAATACAATTTACCTTTAAATGGTGAATCAGCAAAAAAAATTACCCGACAAGCTGGTTAACATTGAAGATAAACAGATCATTAATTATTATTTGATTGTTAGTTTAAAGTAGGTGATCAATCACAAATTCGACTGTTTAGTTTTATTTATTTATTCAT-CAGTCATTATCAGTCATGTAAAAGAATATTTACTTGATTTAAATAAAATGTTAGTTTAACTATTAGAAAAAA]

[+] EMBL CD082717             [CTCGAGCCAANAATTCGGCACGAGGAGCACTCTCATTTGTTGATGAAGTTCATGCTGTTGGTTTATATGGTGCACATGGAGCTGGAGTTGCCGAACGTGATGGTCAGATGCATAGGATAGATGCAATTACGGGTACACTTGGAAAGGCTTTCGCTAGTATCGGAGGCTATTTAGCAGGAAGTTCTGAACTAGTTGATATGATCCGATCTTATGCTTCCGGATTTATATTTACTACTTCACTACCACCACATTCCTTGGCTGCTGCGCAAGCAAGTATTCAAATTTTGAAATCTCCTGAAGGAAAAGAACTTCGTACAGAACACCAAAAACGAGTATCTATTGTACGCCAAAGTCTCCGTCAAGCAGGATTGCCTGTGATTGAAGCGCCGTCACATATTATTCCGCTACATGTCGGTGAAGCAAAACTATGTACGAAAATATCGGAAGAACTATTATCCGAGCATAATATATATGTGCAGTCGATAAATTACCCAACTGTAGACATAGGAGATGAACGTTTGCGTATTGCACCCACACCGCATCATACAGATAAACTAACTGAAGAACTAGTAGATTCTTTATGTATGGTATGGAAAAAATACAATTTACCTTTAAATGGTGAATCAGC                                                                                                                                                                                                       ]
[-] EMBL CD076307             [                                                                                                                                                                                                                                                                             GCAAGTATTCAAATTTTGAAATCTCCTGAAGGAAAAGAACTTCGTACAGAACACCAAAAACGAGTATCTATTGTACGCCAAAGTCTCCGTCAAGCAGGATTGCCTGTGATTGAAGCGCCGTCACATATTATTCCGCTACATGTCGGTGAAGCAAAACTATGTACGAAAATATCGGAAGAACTATTATCCGAGCATAATATATATGTGCAGTCGATAAATTACCCAACTGTAGACATAGGAGATGAACGTTTGCGTATTGCACCCACACCGCATCATACAGATAAACTAACTGAAGAACTAGTAGATTCTTTATGTATGGTATGGAAAAAATACAATTTACCTTTAAATGTTGAATCAGCAAAAAAAATTACCCGACAAGCTGGTTAACATTGAAGATAAACAGATCATTAATTATTATTTGATTGTTAGTTTAAAGTAGGTGATCAATCACAAATTCGACTGTTTAGTTTTATTTATTTATTCAT CAGTCATTATCAGTCATGTAAAAGAATATTTACTTGATTTAAATAAAATGTTAGT                 ]
[+] EMBL AI974216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTAGTTTAAAGTAGGTGATCAATCACAAATTCGACTGTTTAGTTTTAGTTATTTATTCATGCGGTCATTATCAGTCATGTAAAAGAATATTTACGTGATTTAAATAAAATGTTAGTTTAACTATTAGAAAAAA]




>consensus_5020#0
CTCGAGCCAANAATTCGGCACGAGGAGCACTCTCATTTGTTGATGAAGTTCATGCTGTTG
GTTTATATGGTGCACATGGAGCTGGAGTTGCCGAACGTGATGGTCAGATGCATAGGATAG
ATGCAATTACGGGTACACTTGGAAAGGCTTTCGCTAGTATCGGAGGCTATTTAGCAGGAA
GTTCTGAACTAGTTGATATGATCCGATCTTATGCTTCCGGATTTATATTTACTACTTCAC
TACCACCACATTCCTTGGCTGCTGCGCAAGCAAGTATTCAAATTTTGAAATCTCCTGAAG
GAAAAGAACTTCGTACAGAACACCAAAAACGAGTATCTATTGTACGCCAAAGTCTCCGTC
AAGCAGGATTGCCTGTGATTGAAGCGCCGTCACATATTATTCCGCTACATGTCGGTGAAG
CAAAACTATGTACGAAAATATCGGAAGAACTATTATCCGAGCATAATATATATGTGCAGT
CGATAAATTACCCAACTGTAGACATAGGAGATGAACGTTTGCGTATTGCACCCACACCGC
ATCATACAGATAAACTAACTGAAGAACTAGTAGATTCTTTATGTATGGTATGGAAAAAAT
ACAATTTACCTTTAAATGGTGAATCAGCAAAAAAAATTACCCGACAAGCTGGTTAACATT
GAAGATAAACAGATCATTAATTATTATTTGATTGTTAGTTTAAAGTAGGTGATCAATCAC
AAATTCGACTGTTTAGTTTTATTTATTTATTCATCAGTCATTATCAGTCATGTAAAAGAA
TATTTACTTGATTTAAATAAAATGTTAGTTTAACTATTAGAAAAAA

clustalw multiple alignements is not computed in this case