Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5132 cluster # 5132       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5132#0 length = 501 sequences # 3  

consensusID : consensus_5132#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 501
fasta sequence
                              [TATTTATACGCAATCTGTTTTCAAAAGGGTTAACAATGCCTAAGAAGTTAATATTTACGGATTCCTTATTGAGATCATCCACAATTACATGTAAAGTAACCGGGCAATCAATAAACTACCGTACATTTGGGTTAGTTCACGTTAACACAAACCAACA-TTCATAGGAAAGTATTTTAACTTGTAAAGTCATAACTTTGTGTCTACATGAACATTATAAATGTGCGGCATACATAAGTCTTGAAGCGAATTGTCAGTTTATACTGATAAGTATATAAAATATATTTTCAATATTATTGCACTTGAAAGCAAATGTTTGTAGATCACGAGATGTTATGCAGGTACCACGTATGCACAATTAAGTCCGACTAGTGGAGTCAAAATGAACAGTTGTAAACGAGTATAATCTCAGTAAGATGATCTTATTCTCCTATAAACTGAGCAAAACTACCAATAAATTAGGTGAAAACCTAAAACTATGGGAGATTTTTGAGCTTGACAAAT]

[+] EMBL CD183985             [TATTTATACGCAATCTGTTTTCAAAAGGGTTAACAATGCCTAAGAAGTTAATATTTACGGATTCCTTATTGAGATCATCCACAATTACATGTAAAGTAACCGGGCAATCAATAAACTACCGTACATTTGGGTTAGTTCACGTTAACACAAACCAACA TTCATAGGAAAGTATTTTAACTTGTAAAGTCATAACTTTGTGTCTACATGAACATTATAAATGTGCGGCATACATAAGTCTTGAAGCGAATTGTCAGTTTATACTGATAAGTATATAAAATATATTTTCAATATTATTGCACTTGAAAGCAAATGTTTGTAGATCACGAGATGTTATGCAGGTACCACGTATGCACAATTAAGTCCGACTAGTGGAGTCAAAATGAACAGTTGTAAACGAGTATAATCTCAGTAAGATGATCTTATTCTCCTATAAACTGAGCAAAACTACCAATAAATTAGGTGAAAACCTAAAACTATGGGAGATTTTTGAGCTTGACAAA ]
[+] EMBL CD184061             [TATTTATACGCAATCTGTTTTCAGAAGGGTTAACAATGCCTAAGAAGTTAATATTTACGGATTCCTTATTGAGATCATCCACAATTACATGTAAAGTAACCGGGCAATCAATAAACTACCGTACATTTGGGTTAGTTCACGTTAACACAAACCAACA TTCATAGGAAAGTATTTTAACTTGTAAAGTCATAACTTTGTGTCTACATGAACATTATAAATGTGCGGCATACATAAGTCTTGAAGCGAATTGTCAGTTTATACTGATAAGTATATAAAATATATTTTCAATATTATTGCACTTGAAAGCAAATGTTTGTAGATCACGAGATGTTATGCAGGTACCACGTATGCACAATTAAGTCCCACTAGTGGAGTCAAAATGAACAGTTGTAAACGAGTATAATCTCAATAAGATGATCTTATTCTCCTATAAACTGAGCAAAACTACCAATAAATTANGTGAAAACCTAAAACTATGGGAGATTTTTGAGCTTGACAA  ]
[-] EMBL CD130272             [                                                                                                                        GTACA TTGGGTTAGTTCACGTTAACACAAACC ACATTTCAGAGGAAAGTATTTTAACTTGTAAAGTCGTAACTTTGTGTCTACATGAACATTATAAATGTGCGGCATACATAAGTCTTGAAGCGAATTGTCAGTTTATACTGATAAGTATATAAAATAAATTTTCAATATTATTGCACTTGAAAACAAATGTTTGTAGATCACGAGATGTTGTGCAGGTACCAGGTATGCAGAATTAAGTCCGACGAGTGGAGTCAAAATGAACAGTTGTAAACGAGTATAAGCTCAGTAAGATGATCTTATTCTCCTATAAACTGAGCAAAACTACCAATAAATTAGGTGAAAACCTAAAACTATGGGAGATTTTTGAGCTTGACAAAT]


>consensus_5132#0 TATTTATACGCAATCTGTTTTCAAAAGGGTTAACAATGCCTAAGAAGTTAATATTTACGG ATTCCTTATTGAGATCATCCACAATTACATGTAAAGTAACCGGGCAATCAATAAACTACC GTACATTTGGGTTAGTTCACGTTAACACAAACCAACATTCATAGGAAAGTATTTTAACTT GTAAAGTCATAACTTTGTGTCTACATGAACATTATAAATGTGCGGCATACATAAGTCTTG AAGCGAATTGTCAGTTTATACTGATAAGTATATAAAATATATTTTCAATATTATTGCACT TGAAAGCAAATGTTTGTAGATCACGAGATGTTATGCAGGTACCACGTATGCACAATTAAG TCCGACTAGTGGAGTCAAAATGAACAGTTGTAAACGAGTATAATCTCAGTAAGATGATCT TATTCTCCTATAAACTGAGCAAAACTACCAATAAATTAGGTGAAAACCTAAAACTATGGG AGATTTTTGAGCTTGACAAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)