Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5175 cluster # 5175       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5175#0 length = 481 sequences # 3  

consensusID : consensus_5175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 481
fasta sequence
                              [AATCAACTTTTCAGGACAGCTGTGAGTCATATATGGAGAAATTCGAACACATTACTTGTACCTGAAGTTGGTGCTGGGGATGTCGTTCAGAATAACGAAGAAAGCTCCACGACCAAACCATTCATCTCAGCGAACAAAACTTCATCAAAATTATAGAAACTGGCTAGAAAGTTGTTAACAAGCGTTGTACTAGCAGACTGACTCATTCATAATTGTCATTTTTTCGCTATTAGT-AATTTTACCCTAAAATATATTTTGCTTTCTGCTGTTCAACGTCAATTATCACTAAGTTATACCATATAATGTACAGTAACATCGCTTTTTGTTGAGAGAGTAGGGGTA-ATATCTAGTAAAAGAACTATTTCTTTTCATATCGCTCGTGGTGGTACTTGTTGGCTGAACTGATGTTACTTTGTTTCGAAACGTTCGTAGGTGTTCTGTTATTCTCGTGCCAGTGATACCATGAACGCTCATTCTCTGT]

[+] EMBL CD139599             [AATCAACTTTTCAGGACAGCTGTGAGTCATATATGGAGAAATTCGAACACATTACTTGTACCTGAAGTTGGTGCTGGGGATGTCGTTCAGAATAACGAAGAAAGCTCCACGACCAAACCATTCATCTCAGCGAACAAAACTTCATCAAAATTATAGAAACTGGCTAGAAAGTTGTTAACAAGCGTTGTACTAGCAGACTGACTCATTCATAATTGTCATTTTTTCGCTATTAGT AATTTTACCCTAAAATATATTTTGCTTTCTGCTGTTCAACGTCAATTATCACTAAGTTATACCATATAATGTACAGTAACATCGCTTTTTGTTGAGAGAGTAGGGGTA ATATCTAGn                                                                                                                                  ]
[+] EMBL CD139903             [                      TGAGTCATATATGGAGAAATTCGAACACATTACTTGTACCTGAAGTTGGTGCTGGTGATGTCGTTCAGAATAACGAAGAAAGCTCCACGACCAAACCATTCATCTCAGCGAACAAAACTTCATCAAAATTATAGAAACTGGCTAGAAAGTTGTTAACAAGCGTTGTACTAGCAGACTGACTCATTCATAATTGTCATTTTTTCGCTATTAGT AATTTTACCCTAAAATATATTTTGCTTTCTGCTGTTCAACGTCAATTATCACTAAGTTATACCATATAATGTACAGTAACATCGCTTTTTGTTGAGAGAGTA GGGTANATATCTAGTAAAAGAACTATTTCTTTT                                                                                                                ]
[-] EMBL CD139908             [                                                                                                                                                                                                                    tnGTCA TTTTTCGCTA TAGTAAATTNTACCCTAAAATATATTTTGCTTTCTGCTGTTCAACGTCAATTATCACTAAGTTATACCATATAATGTACAGTAACATCGCTTTTCGTTGAGAGAGTAGGGCAA ATATCTAGTAAAAGAACTATTTCTTTTCATATCGCTCGTGGTGGTACTTGTTGGCTGAACTGATGTTACTTTGTTTCGAAACGTTCGTAGGTGTTCTGTTATTCTCGTGCCAGTGATACCATGAACGCTCATTCTCTGT]


>consensus_5175#0 AATCAACTTTTCAGGACAGCTGTGAGTCATATATGGAGAAATTCGAACACATTACTTGTA CCTGAAGTTGGTGCTGGGGATGTCGTTCAGAATAACGAAGAAAGCTCCACGACCAAACCA TTCATCTCAGCGAACAAAACTTCATCAAAATTATAGAAACTGGCTAGAAAGTTGTTAACA AGCGTTGTACTAGCAGACTGACTCATTCATAATTGTCATTTTTTCGCTATTAGTAATTTT ACCCTAAAATATATTTTGCTTTCTGCTGTTCAACGTCAATTATCACTAAGTTATACCATA TAATGTACAGTAACATCGCTTTTTGTTGAGAGAGTAGGGGTAATATCTAGTAAAAGAACT ATTTCTTTTCATATCGCTCGTGGTGGTACTTGTTGGCTGAACTGATGTTACTTTGTTTCG AAACGTTCGTAGGTGTTCTGTTATTCTCGTGCCAGTGATACCATGAACGCTCATTCTCTG T



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)