Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5244 cluster # 5244       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5244#0 length = 679 sequences # 3  

consensusID : consensus_5244#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 679
fasta sequence
                              [TTACTATTCACATAATTCTTCTCTCTATGTTTCTTTGTTTTTTCCTTTTTATTTTTCTGCCCAACTTTGGACTTAGATACATGGGTTACTGTTCTACCATCATCAATATCATAGGACGAATCACTATGCTCAGAGTCAGAGTTGGAACTGTCAGATTCTGATTTTGGTTTATTTAAATTGTAGTCTGTATTTGGCATAGGTTCTTTTTTATTACTCTCAGTTAAGCGATTCAACTCGTTAAAACGAATTTGTTTATGTTGTACATAGAATTGCCAGAATGGTAGAAGCTTGTTTGAATTATCAATAAAAGTACACGTCGACTCAATGTTTAGTATTTCATTCCTACTAGCTAGATTACGGACACGCCTTCGACATTTAATAATCCATTCTGAATGTTCACGTACTTTAGTCATTAAAGCTTTCATTTGTCTACAAAAACCGGCTACGCGACAAACATGTAAGAATTGTTTTACCTCGGTGATAAAAGGCAGTGAATACTCTGGAAAAACAATTGAATTTGCATGCAATGCCATACATTCTGCTAATAAATCAAATAGCCAACTAATGATTGCATCATTCGATGCGGTTTCACGTAATTGACTAGGTGTGAAGTGAAGCAACAAGCGTAAATCTAAGGGAGCATTTGAAACACGTCCAGATCGTTGATTAAAGTTAACTA]

[+] EMBL CD117357             [TTACTATTCACATAATTCTTCTCTCTATGTTTCTTTGTTTTTTCCTTTTTATTTTTCTGCCCAACTTTGGACTTAGATACATGGGTTACTGTTCTACCATCATCAATATCATAGGACGAATCACTATGCTCAGAGTCAGAGTTGGAACTGTCAGATTCTGATTTTGGTTTATTTAAATTGTAGTCTGTATTTGGCATAGGTTCTTTTTTATTACTCTCAGTTAAGCGATTCAACTCGTTAAAACGAATTTGTTTATGTTGTACATAGAATTGCCAGAATGGTAGAAGCTTGTTTGAATTATCAATAAAAGTACACGTCGACTCAATGTTTAGTATTTCATTCCTACTAGCTAGATTACGGACACGCCTTCGACATTTAATAATCCATTCTGAATGTTCACGTACTTTAGTCATTAAAGCTTTCATTTGTCTACAAAAACCGGCTACGCGACAAACATGTAAGAATTGTTTTACCTCGGTGATAAAAGGCAGTGAATACTCTGGAAAAACAATTGAATTTGCATGCAATGCCATACATTCTGCTAATAAATCAAATAGCCAACTAATGATTGCATCATTCGATGCGGTTTCACGTAATTGACTAGGTGTGAAGTG                                                                 ]
[+] EMBL CD117491             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATTGCATCATTCGATGCGGTTTCACGTAATTGACTAGGTGTGAAGTGAAGCAACAAGCGTAAATCTAAGGGAGCATTTGAAACACGTCCAGATCGTTGATTAAAGTTAACTA]
[+] EMBL CD117576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATTGCATCATTCGATGCGGTTTCACGTAATTGACTAGGTGTGAAGTGAAGCAACAAGCGTAAATCTAAGGGAGCATTTGAAACACGTCCAGATCGTTGATTAAAGTTAACTA]


>consensus_5244#0 TTACTATTCACATAATTCTTCTCTCTATGTTTCTTTGTTTTTTCCTTTTTATTTTTCTGC CCAACTTTGGACTTAGATACATGGGTTACTGTTCTACCATCATCAATATCATAGGACGAA TCACTATGCTCAGAGTCAGAGTTGGAACTGTCAGATTCTGATTTTGGTTTATTTAAATTG TAGTCTGTATTTGGCATAGGTTCTTTTTTATTACTCTCAGTTAAGCGATTCAACTCGTTA AAACGAATTTGTTTATGTTGTACATAGAATTGCCAGAATGGTAGAAGCTTGTTTGAATTA TCAATAAAAGTACACGTCGACTCAATGTTTAGTATTTCATTCCTACTAGCTAGATTACGG ACACGCCTTCGACATTTAATAATCCATTCTGAATGTTCACGTACTTTAGTCATTAAAGCT TTCATTTGTCTACAAAAACCGGCTACGCGACAAACATGTAAGAATTGTTTTACCTCGGTG ATAAAAGGCAGTGAATACTCTGGAAAAACAATTGAATTTGCATGCAATGCCATACATTCT GCTAATAAATCAAATAGCCAACTAATGATTGCATCATTCGATGCGGTTTCACGTAATTGA CTAGGTGTGAAGTGAAGCAACAAGCGTAAATCTAAGGGAGCATTTGAAACACGTCCAGAT CGTTGATTAAAGTTAACTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)