cluster # 5305

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Schistosoma mansoni
cluster # 5305 cluster # 5305 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5305#0 length = 555 sequences # 3

consensusID : consensus_5305#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 555
fasta sequence

                              [GTTTTGTATTGACAATATG-TATTATAAAACAAATGAACGCCCACCAAATGTTCTTTACTTGCCGGACGGTTTTATTAGAAGTGAGAGGCGTAATTTATGGTAACACGAAACTAGAGTACAGTGTATATACAACTATACAACATTTTCTGGAAGAAAAAGGCGTAGTATCGTGGATGTTTTCCTGCTTATTAAACGAAGGATGTGCATGCCAAGAGACCTTTTCAGAATGAAATGACAACTTTACAACCTGTTTTTTACACCTACTTCGAACTATCGACGACAGATTGACTCGTGCTTAGGCGTCAGCATTTTAAACTCAGCTGAACTGGTATATGTATTCTCCAAAAATTGAATCATACTGAGTTTTCGAAGCAGGGATCATTTCAAGCGCTTGTGTATGGGTGCTTTTAGGACGTGGGAAGAATTAAATTTAGTTCATGAAACATTTACTGTAGACCGATGTAAACACTTGGGGTCATAGTATTCAGTCACCTAAACGAAATGAAGCTCAGTGTTAGTTCAAAACCAAATATTTTGATCGTACATCATAGCTCC]

[-] EMBL CD133138             [GTTTTGTATTGACAATATG TATTATAAAACAAATGAACGCCCACCAAATGTTCTTTACTTGCCGGACGGTTTTATTAGAAGTGAGAGGCGTAATTTATGGTAACACGAAACTAGAGTACAGTGTATATACAACTATACAACATTTTCTGGAAGAAAAAGGCGTAGTATCGTGGATGTTTTCCTGCTTATTAAACGAAGGATGTGCATGCCAAGAGACCTTTTCAGAATGAAATGACAACTTTACAACCTGTTTTTTACACCTACTTCGAACTATCGACGACAGATTGACTCGTGCTTAGGCGTCAGCATTTTAAACTCAGCTGAACTGGTATATGTATTCTCCAAAAATTGAATCATACCGAG                                                                                                                                                                                                ]
[+] EMBL CD113882             [   cgtgATTGACTGTATGATATTATAAAACAAATGAACGCCCACCAAATGTTCTTTACTTGCCGGACGGTTTTATTAGAAGTGAGAGGCGTAATTTATGGTAACACGAAACTAGAGTACAGTGTATATACAACTATACAACATTTTCTGGAAGAAAAAGGCGTAGTATCGTGGATGTTTTCCTGCTTATTAAACGAAGGATGTGCATGCCAAGAGACCTTTTCAGAATGAAATGACAACTTTACAACCTGTTTTTTACACCTACTTCGAACTATCGACGACAGATTGACTCGTGCTTAGGCGTCAGCATTTTAAACTCAGCTGAACTGGTATATGTATTCTCCAAAAATTGAATCATACTGAGTTTTCGAAGCAGGGATCATTTCAAGCGCTTGTGTATGGGTGCTTTTAGGACGTGGGAAGAATTAAATTTAGTTCATGAAACATTTACTGTAGACCGATGTAAACACTTG                                                                                   ]
[+] EMBL CD196962             [                                                                                                                                                                                                                                 GAATGGAATGACAACTTTACAACCTGTTTTTTACACCTACTTCGAACTATCGACGACAGATTGACTCGTGCTTAGGCGTCAGCATTTTAAACTCAGCTGAACTGGTATATGTATTCTCCAAAAATTGAATCATACTGAGTTTTCGAAGCAGGGATAATTTCAAGCGCTTGTGTATGGGTGCTTTTAGGACGTGGGAAGAATTAAATTTAGTTCATGAAACATTTACTGTAGACCGATGTAAACACTTGGGGTCATAGTATTCAGTCACCTAAACGAAATGAAGCTCAGTGTTAGTTCAAAACCAAATATTTTGATCGTACATCATAGCTCC]




>consensus_5305#0
GTTTTGTATTGACAATATGTATTATAAAACAAATGAACGCCCACCAAATGTTCTTTACTT
GCCGGACGGTTTTATTAGAAGTGAGAGGCGTAATTTATGGTAACACGAAACTAGAGTACA
GTGTATATACAACTATACAACATTTTCTGGAAGAAAAAGGCGTAGTATCGTGGATGTTTT
CCTGCTTATTAAACGAAGGATGTGCATGCCAAGAGACCTTTTCAGAATGAAATGACAACT
TTACAACCTGTTTTTTACACCTACTTCGAACTATCGACGACAGATTGACTCGTGCTTAGG
CGTCAGCATTTTAAACTCAGCTGAACTGGTATATGTATTCTCCAAAAATTGAATCATACT
GAGTTTTCGAAGCAGGGATCATTTCAAGCGCTTGTGTATGGGTGCTTTTAGGACGTGGGA
AGAATTAAATTTAGTTCATGAAACATTTACTGTAGACCGATGTAAACACTTGGGGTCATA
GTATTCAGTCACCTAAACGAAATGAAGCTCAGTGTTAGTTCAAAACCAAATATTTTGATC
GTACATCATAGCTCC

clustalw multiple alignements is not computed in this case