cluster # 5308

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Schistosoma mansoni
cluster # 5308 cluster # 5308 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5308#0 length = 525 sequences # 3

consensusID : consensus_5308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 525
fasta sequence

                              [AACATGCATCGGCTGTCACCTGGGTACAAGTTGTTCTCAATTATGTTGTTAGTTCAGGCGATGATGGAACGGTGAAATTATGGGATCTTAAAACGGGCGATTTCATTCGAAATCTTGTCTTACTCGATTCAGCTGGAAGTGGAGGCGTAGTATGGCGAATCAAATGTACAGATTCAGCGTTGGTATGCGCCGCCGGAAGCCGCAATAGCACAGAAGATACAAAAGTGATTATGCTTGATTTCGATCGTACGACGATCTGTTCATAATGTATTTTTCTCTTCGTTATTTTGCATTTCTTTGTCTCCTTGTCTTTACAATTAGTGTATTTCTTTTAAAACGTTTGCCACCTGTCTTTAATTATGTGACTTGACTACTCCTTTTTTTCCTCGAAACATTTGTCCATGTCAATGCTCTAGTTGTTGTTCTGTTTACTGTTGTTGTTGTTGTTATTGTTGTTGATGATGGTGTTCTTGTTATTTTTTGTTCATAGTTGATTTATTTTTCGTTTCGCTTTCTTTTCTCTTT]

[+] EMBL CD089752             [AACATGCATCGGCTGTCACCTGGGTACAAGTTGTTCTCAATTATGTTGTTAGTTCAGGCGATGATGGAACGGTGAAATTATGGGATCTTAAAACGGGCGATTTCATTCGAAATCTTGTCTTACTCGATTCAGCTGGAAGTGGAGGCGTAGTATGGCGAATCAAATGTACAGATTCAGCGTTGGTATGCGCCGCCGGAAGCCGCAATAGCACAGAAGATACAAAAGTGATTATGCTTGATTTCGATCGTACGACGATCTGTTCATAATGTATTTTTCTCTTCGTTATTTTGCATTTCTTTGTCTCCTTGTCTTTACAATTAGTGTATTTCTTTTAAAACGTTTGCCACCTGTCTTTAATTATGTGACTTGACTACTCCTTTTTTTCCTCGAAACATTTGTCCATGTCAATGCTCTAGTTGTTGTTCTGTTTACTGTTGTTGTTGTTGTTATTGTTGTTGATG                                                                ]
[-] EMBL CD089838             [ ACATGCATCGGCTGTCACCTGGGTACAAGTTGTTCTCAATTATGTTGTTAGTTCAGGCGATGATGGAACGGTGAAATTATGGGATCTTAAAACGGGCGATTTCATTCGAAATCTTGTCTTACTCGATTCAGCTGGAAGTGGAGGCGCAGTATGGCGAATCAAATGTACAGATTCAGCGTTGGTATGCGCCGCCGGAAGCCGCAATAGCACAGAAGATACAAAAGTGATTATGCTTGATTTCGATCGTACGACGATCTGTTCATAATGTATTTTTCTCTTCGTTATTTTGCATTTCTTTGTCTCCTTGTCTTTACAATTAGTGTATTTCTTTTAAAACGTTTGCCACCTGTCTTTAATTATGTG                                                                                                                                                                 ]
[-] EMBL CD089663             [                                                                                                                                                GCGTAGTATGGCGAATCAAATGTACAGATTCAGCGTTGGTATGCGCCGCCGGAAGCCGCAATAGCACAGAAGATACAAAAGTGATTATGCTTGATTTCGATCGTACGACGATCTGTTCATAATGTATTTTTCTCTTCGTTATTTTGCATTTCTTTGTCTCCTTGTCTTTACAATTAGTGTATTTCTTTTAAAACGTTTGCCACCTGTCTTTAATTATGTGACTTGACTACTCCTTTTTTTCCTCGAAACATTTGTCCATGTCAATGCTCTAGTTGTTGTTCTGTTTACTGTTGTTGTTGTTGTTATTGTTGTTGATGATGGTGTTCTTGTTATTTTTTGTTCATAGTTGATTTATTTTTCGTTTCGCTTTCTTTTCTCTTT]




>consensus_5308#0
AACATGCATCGGCTGTCACCTGGGTACAAGTTGTTCTCAATTATGTTGTTAGTTCAGGCG
ATGATGGAACGGTGAAATTATGGGATCTTAAAACGGGCGATTTCATTCGAAATCTTGTCT
TACTCGATTCAGCTGGAAGTGGAGGCGTAGTATGGCGAATCAAATGTACAGATTCAGCGT
TGGTATGCGCCGCCGGAAGCCGCAATAGCACAGAAGATACAAAAGTGATTATGCTTGATT
TCGATCGTACGACGATCTGTTCATAATGTATTTTTCTCTTCGTTATTTTGCATTTCTTTG
TCTCCTTGTCTTTACAATTAGTGTATTTCTTTTAAAACGTTTGCCACCTGTCTTTAATTA
TGTGACTTGACTACTCCTTTTTTTCCTCGAAACATTTGTCCATGTCAATGCTCTAGTTGT
TGTTCTGTTTACTGTTGTTGTTGTTGTTATTGTTGTTGATGATGGTGTTCTTGTTATTTT
TTGTTCATAGTTGATTTATTTTTCGTTTCGCTTTCTTTTCTCTTT

clustalw multiple alignements is not computed in this case