Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5326 cluster # 5326       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5326#0 length = 535 sequences # 3  

consensusID : consensus_5326#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 535
fasta sequence
                              [TAGATCTACTGGGCATCCAGCTTTGAGCAAGTAAAGAACCACATCAAAGTGACCGCGGCTAGCAGCTAAGAGCAGTCCTGTCTCTCCGTTATCTCCAGATAGAATGATATTTGCACCATAG-AAAACGAGTAACTCCACTGCAGCTTTCTGTCCATTAGCACAAGCCCATAACAGTGGCGTAAATCCCTGGTTATCTGGGATATCTAGATTGAAGTTCCGACTTTCTATTTCCCTTTGAAGCAACAACAGCTCACCCTGAGCAGCCATTTGAAAAAATGTTAGGTCTTTCGATTCTGTTGGAGCAAGTGTTAGAACACTTCTTCGCTGCACATTAGTTAGTAAAGTACAGATGTTATTTGGCGACCGACCACAAGGCCTGTTGAACTCGGCTCTTGATAAAAAATCGGGTGGAGGTACAATTGACCGAGACGACATTTCTGTGAATCAAGCCATCAGAAATGTTACACGTAGTAAGACTGAACGGCGGTTTTGCGACTACTTCTATCGTGACGTTCGGAAGTCGAATTAGCGCCGA]

[+] EMBL CD113598             [TAGATCTACTGGGCATCCAGCTTTGAGCAAGTAAAGAACCACATCAAAGTGACCGCGGCTAGCAGCTAAGAGCAGTCCTGTCTCTCCGTTATCTCCAGATAGAATGATATTTGCACCATAGTAAAACGAGTAACTGCACTGCAGCTTTCTGTCCATTAGCACAAGCCCATAACAGTGGCGTAAATCCCTGGTTATCTGGGATATCTAGATTGAAGTTCCGACTCTCTATTTCCCTTTGAAGCAACAACAGCTCACCCTGAGCAGCCATTTGAAAAAATGTTAGGTCTTTCGATTCTGTTGGAGCAAGTGTTAGAACACTTCTTCGCTGCACATTAGTTAGTAAAGTACAGATGTTATTTGGCGACCGACCACAAGGCCTGTTGAACTCGGCTCTTGATAAAAAATCGGGTGGAGGTACAATTGACCGAGACGACATTTCTGTGAATCAAGCCATCAGAAATGTTACACGTAGTAAGACTGAACGGCGGTTTTGCGACTACTTCTATCGTGACGTTCGGAAGTCGAATTAGCGCCGA]
[+] EMBL CD113544             [TAGATCTACTGGGCATCCAGCTTTGAGCAAGTAAAGAACCACATCAAAGTGACCGCGGCTAGCAGCTAAGAGCAGTCCTGTCTCTCCGTTATCTCCAGATAGAATGATATTTGCACCATAG AAAACGAGTAACTCCACTGCAGCTTTCTGTCCATTAGCACAAGCCCATAACAGTGGCGTAAATCCCTGGTTATCTGGGATATCTAGATTGAAGTTCCGACTTTCTATTTCCCTTTGAAGCAACAACAGCTCACCCTGAGCAGCCATTTGAAAAAATGTTAGGTCTTTCGATTCTGTTGGAGCAAGTGTTTGAACATTTCTTCGCTGCACATTAGTTAGTAAAGTAGAGATTTTATTTGGCGACCGACCACAAGGTCTGTTGAACTCGGCTTTTGATAAAAAATCGGGTGGAGGTACAATTGACCGAAACGACATTTCTGTTAATCAAGCCATCAGAAATGTTACACGTAGTAAGACTGAACGGCGGTTTTCCGACTACTTCTAACGTGACGTT GGAAGTCGAATTAGCGCCGA]
[-] EMBL CD149269             [                                                                                 CTCTCCGTTATCTCCAGATAGAATGATATTTGCACCATAG AAAACGAGTAACTCCACTGCAGCTTTCTGTCCATTAGCACAAGCCCATAACAGTGGCGTAAATCCCTGGTTATCTGGGATATCTAGATTGAAGTTCCGACTTTCTATTTCCCTTTGAAGCAACAACAGCTCACCCTGAGCAGCCATTTGAAAAAATGTTAGGTCTTTCGATTCTGTTGGAGCAAGTGT                                                                                                                                                                                                                                  ]


>consensus_5326#0 TAGATCTACTGGGCATCCAGCTTTGAGCAAGTAAAGAACCACATCAAAGTGACCGCGGCT AGCAGCTAAGAGCAGTCCTGTCTCTCCGTTATCTCCAGATAGAATGATATTTGCACCATA GAAAACGAGTAACTCCACTGCAGCTTTCTGTCCATTAGCACAAGCCCATAACAGTGGCGT AAATCCCTGGTTATCTGGGATATCTAGATTGAAGTTCCGACTTTCTATTTCCCTTTGAAG CAACAACAGCTCACCCTGAGCAGCCATTTGAAAAAATGTTAGGTCTTTCGATTCTGTTGG AGCAAGTGTTAGAACACTTCTTCGCTGCACATTAGTTAGTAAAGTACAGATGTTATTTGG CGACCGACCACAAGGCCTGTTGAACTCGGCTCTTGATAAAAAATCGGGTGGAGGTACAAT TGACCGAGACGACATTTCTGTGAATCAAGCCATCAGAAATGTTACACGTAGTAAGACTGA ACGGCGGTTTTGCGACTACTTCTATCGTGACGTTCGGAAGTCGAATTAGCGCCGA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)