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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5400 cluster # 5400       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5400#0 length = 620 sequences # 3  

consensusID : consensus_5400#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 620
fasta sequence
                              [TCAAGGTCACTTTGCCCGCCAAAGCCCTGAGATGTCTGACGACTTGCGCGATTTCGAGGAGCAAATTAGACTTCAAAATTCTCAGACTGTTAATGTCGAGGTGAAAACGAGGGTCGATCCAGATGGGACTGTTATGGAATGGGATGAGCAGCGCAAAGGGTGGTTTCCTAAAATAGATGACGATTTTATTGCTCGTTATCAAATGAGTTACGGTGTTTCTGCGAGTAATCAGCATGAGTCCCCTGTCGCTTCAGATAGTGTGTGCAGTACTGTAGACTGGACACGCTTCAACGCAGAGCTAGCCGAACTTAGAGCGACCAAAGGTGATAATTCTGTGGAGGTACAGGAGCTTATGAAGGCTGCTAATGAATCGTTAACAGCTTATTATAATTCTTCAGCCTACCGAGAATGGTACGAAAAATACTGCAAACAAAACGAATCCCAAAATACCCAACCTATTGAACATAAGATTGAAATAAAGAAATCTAGCAACAAAGCANAGCATGAACTAAAACCTTCGGAACGTATGCTTAATAGTTTCCTAGATGAAGGAGATGATCCGGATACTGCTTTGGNCAGAGTGGAAGCAGAATTATTATCTGGCGCACAGCCTACANATT]

[+] EMBL CD156720             [TCAAGGTCACTTTGCCCGCCAAAGCCCTGAGATGTCTGACGACTTGCGCGATTTCGAGGAGCAAATTAGACTTCAAAATTCTCAGACTGTTAATGTCGAGGTGAAAACGAGGGTCGATCCAGATGGGACTGTTATGGAATGGGATGAGCAGCGCAAAGGGTGGTTTCCTAAAATAGATGACGATTTTATTGCTCGTTATCAAATGAGTTACGGTGTTTCTGCGAGTAATCAGCATGAGTCCCCTGTCGCTTCAGATAGTGTGTGCAGTACTGTAGACTGGACACGCTTCAACGCAGAGCTAGCCGAACTTAGAGCGACCAAAGGTGATAATTCTGTGGAGGTACAGGAGCTTATGAAGGCTGCTAATGAATCGTTAACAGCTTATTATAATTCTTCAGCCTACCGAGAATGGTACGAAAAATACTGCAAACAAAACGAATCCCAAAATACCCAACCTATTGAACATAAGATTGAAATAAAGAAATCTAGCAACAAAGCANAGCATGAACTAAAACCTTCGGAACGTATGCTTAATAGTTTCCTAGATGAAGGAGATGATCCGGATACTGCTTTGGNCAGAGTGGAAGCAGAATTATTATCTGGCGCACAGCCTACANATT]
[+] EMBL CD156686             [TCAAGGTCACTTTGCCCGCCAAAGCCCTGAGATGTCTGACGACTTGCGCGATTTCTTGGAGCAAATTATACTTCAAAATCCTCACACTGTTAATGTCGAGGTGAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BG930426             [                                                                                                                 TCGACCCAGATGGGACTGTTATGGAATGGGATGAGCAGCGCAAAGGGTGGTTTCCTAAAATAGATGACGATTTTATTGCTCGTTATCAAATGAGTTACGGTGTTTCTGCGAGTAATCAGCATGAG                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_5400#0 TCAAGGTCACTTTGCCCGCCAAAGCCCTGAGATGTCTGACGACTTGCGCGATTTCGAGGA GCAAATTAGACTTCAAAATTCTCAGACTGTTAATGTCGAGGTGAAAACGAGGGTCGATCC AGATGGGACTGTTATGGAATGGGATGAGCAGCGCAAAGGGTGGTTTCCTAAAATAGATGA CGATTTTATTGCTCGTTATCAAATGAGTTACGGTGTTTCTGCGAGTAATCAGCATGAGTC CCCTGTCGCTTCAGATAGTGTGTGCAGTACTGTAGACTGGACACGCTTCAACGCAGAGCT AGCCGAACTTAGAGCGACCAAAGGTGATAATTCTGTGGAGGTACAGGAGCTTATGAAGGC TGCTAATGAATCGTTAACAGCTTATTATAATTCTTCAGCCTACCGAGAATGGTACGAAAA ATACTGCAAACAAAACGAATCCCAAAATACCCAACCTATTGAACATAAGATTGAAATAAA GAAATCTAGCAACAAAGCANAGCATGAACTAAAACCTTCGGAACGTATGCTTAATAGTTT CCTAGATGAAGGAGATGATCCGGATACTGCTTTGGNCAGAGTGGAAGCAGAATTATTATC TGGCGCACAGCCTACANATT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)