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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5421 cluster # 5421       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5421#0 length = 589 sequences # 3  

consensusID : consensus_5421#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 589
fasta sequence
                              [AGAACACATTTATTTATACATACATAACATTGACAAAGGTATATAAAATATTACAAATGTAAAGAAAAATTATACAAGTCAAATAAATCATACATAGATGAAACAACCATTATTTTCATAAACATACAAAAAGAAAAAAAC--AAATTATCAAATAAATCTACATGAACTAGAAATCAAGCCCAAGCTCTAAGAATTGCTCGTCTTGTAGCTAAACGACATGATACAATGGAAGCAATTATCATTCCTAATGTGACAGTAGCTATTGCAGTATAATCGAAATCTTCTTTAAGTAAATCATATGTTTGTGAAGGTGATATTCGAGTGAAAAACAAATCTAATCCATATGCAAATACTAATCCAGTGGACTCTAAACCGGTAGGTGCTGTACGAATAGCTCGAATTCGCATAATTGATTGATTATATGTAATTATAGCTTGATCGGAAAACGGTAGCACAGGAGCATAAGGATGAACACCTTCTTCCATTAGTTCAGAAGTCATATCCAAACTACGACGGGGATCGAAAAATGTCTTCGGAAGTTCAATTAGACTATTCCTCTGTAAAGCCAAAATTATATTCTTGGCGGTTA]

[+] EMBL CD077331             [AGAACACATTTATTTATACATACATAACATTGACAAAGGTATATAAAATATTACAAATGTAAAGAAAAATTATACAAGTCAAATAAATCATACATAGATGAAACAACCATTATTTTCATAAACATACAAAAAGAAAAAAAC  AAATTATCAAATAAATCTACATGAACTAGAAATCAAGCCCAAGCTCTAAGAATTGCTCGTCTTGTAGCTAAACGACATGATACAATGGAAGCAATTATCATTCCTAATGTGACAGTAGCTATTGCAGTATAATCGAAATCTTCTTTAAGTAAATCATATGTTTGTGAAGGTGATATTCGAGTGAAAAACAAATCTAATCCATATGCAAATACTAATCCAGTGGACTCTAAACCGGTAGGTGCTGTACGAATAGCTCGAATTCGCATAATTGATTGATTATATGTAATTATAGCTTGATCGGAAAACGGTAGCACAGGAGCATAAGGATGAACACCTTCTTCCATTAGTTCAGAAGTCATATCCAAACTACGACGGGGATCGAAAAATGTCTTCGGAAGTTCAATTAGACTATTCCTCTGTAAAGCCAAAATTATATTCTTGGCGGTTA]
[-] EMBL SMAA25584            [   ACACATTTATTTATACATACATAACATTGACAAAGGTATATAAAATATTACAAATGTAAAGAAAAATTATACAAGTCAAATAAATCATACATAGATGAAACAACCATTATTTTCATAAACATACAAAAAGAAAAAAACCGTAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL SMAA25582            [   ACACATTTATTTATACATACATAACATTGACAAAGGTATATAAAATATTACAAATGTAAAGAAAAATTATACAAGTCAAATAAATCATACATAGATGAAACAACCATTA TTTCATAAACATACAAAAAGAAAAANAC  CAATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_5421#0 AGAACACATTTATTTATACATACATAACATTGACAAAGGTATATAAAATATTACAAATGT AAAGAAAAATTATACAAGTCAAATAAATCATACATAGATGAAACAACCATTATTTTCATA AACATACAAAAAGAAAAAAACAAATTATCAAATAAATCTACATGAACTAGAAATCAAGCC CAAGCTCTAAGAATTGCTCGTCTTGTAGCTAAACGACATGATACAATGGAAGCAATTATC ATTCCTAATGTGACAGTAGCTATTGCAGTATAATCGAAATCTTCTTTAAGTAAATCATAT GTTTGTGAAGGTGATATTCGAGTGAAAAACAAATCTAATCCATATGCAAATACTAATCCA GTGGACTCTAAACCGGTAGGTGCTGTACGAATAGCTCGAATTCGCATAATTGATTGATTA TATGTAATTATAGCTTGATCGGAAAACGGTAGCACAGGAGCATAAGGATGAACACCTTCT TCCATTAGTTCAGAAGTCATATCCAAACTACGACGGGGATCGAAAAATGTCTTCGGAAGT TCAATTAGACTATTCCTCTGTAAAGCCAAAATTATATTCTTGGCGGTTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)