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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5453 cluster # 5453       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5453#0 length = 1000 sequences # 3  

consensusID : consensus_5453#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1000
fasta sequence
                              [CCAACCAGACTCGTAGATCACGACGGCGAGATAAGACATTTGAGAGCATTTCAAAGACATTTGGTGAAAGTGTTCTTTGACAGTGCTTCGCTGTATCGTTTATGGTGATACTATTCAAACAGGATTTATTGCACGAAACAGGAGAGCTTTTCATTTGTTCACATGTACTTGATGCTGTATTGAAGCAAGTAGGTGGTGTCTGAGAAGCTGGAGAGGTTGTAAAACATTTCTTATTATTGTCGGAAGAGGATATTGCTGAAACACAATTAACTTTAGTGTTGGGATGCAGCGCCACATTGGAGTCATGGGAAGACTCATTCAGAAACCATTCTTGGATATCACCAGGGAACTGAGATGTATGCGCTCCATTTGGTTGATGCAATCCACAGCTATCATTACTTAGATTTAAGCTTAAGTTACTACTGCTTGTACTTCCATCTCCGATACGCAGAAGCCTGCTTGCGATATGACCATTGATATCAGTTTGTCTTAATCCGATTCCCCAAGGAGGTGCGAGATTCAACCCACTATCTCTAAATTCACTAGCCCCGCTAGACTGGATGGGGCTATGAAATGAAGGCTCGAGGGCACTATCAGAACATAAATCGACAACTAGGGGTGTTGAAAGTGATTGAAATATCGAATCAAGACCAGTTGAGGGTCGATTTGGACAAGAATCCTTGACATTGTTTGATAAAGTGGCAATCGAAAAGTGAGCAGTAACCATTTCACGATCGTCTACTACATCGCAGACCAAATCATCCCAATCAAGCATACCACCATCTCTAGCAACATTGATGCTGTGAACGACAATACGATCCTGTGGTCCGAGCTTCGGTAAAGTATGCCTAACTCTCCTCAAACCACTAAGAGTCAAGTCTCTAACCGTTAAGTTCCCTAAACCACAAGGAACCACGACCTTTGTGTCTCCAAAACAGACCGTCAACTTCATGTTCCATTTCTGGCAGTAATGACCTTCAAGAGACAGCTGTGGAAATTA]

[+] EMBL CD062532             [CCAACCAGACTCGTAGATCACGACGGCGAGATAAGACATTTGAGAGCATTTCAAAGACATTTGGTGAAAGTGTTCTTTGACAGTGCTTCGCTGTATCGTTTATGGTGATACTATTCAAACAGGATTTATTGCACGAAACAGGAGAGCTTTTCATTTGTTCACATGTACTTGATGCTGTATTGAAGCAAGTAGGTGGTGTCTGAGAAGCTGGAGAGGTTGTAAAACATTTCTTATTATTGTCGGAAGAGGATATTGCTGAAACACAATTAACTTTAGTGTTGGGATGCAGCGCCACATTGGAGTCATGGGAAGACTCATTCAGAAACCATTCTTGGATATCACCAGGGAACTGAGATGTATGCGCTCCATTTGGTTGATGCAATCCACAGCTATCATTACTTAGATTTAAGCTTAAGTTACTACTGCTTGTACTTCCATCTCCGATACGCAGAAGCCTGCTTGCGATATGACCATTGATATCAGTTTGTCTTAATCCGATTCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD194899             [                                                                                                                                                                                                                                                                                                             GTCATGGGAAGACTCATTCAGAAACCATTCTTGGATATCACCAGGGAACTGAGATGTATGCGCTCCATTTGGTTGATGCAATCCACAGCTATCATTACTTAGATTTAAGCTTAAGTTACTACTGCTTGTACTTCCATCTCCGATACGCAGAAGCCTGCTTGCGATATGACCATTGATATCGGTTTGTCTTAATCCGATTCCGCAAGGAGGTGCGAGATTCAACCCACTATCTCTAAATTCACTAGCCCCGCTAGACTGGATGGGGCTATGAAATGAAGGCTCGAGGGCACTATCAGAACATAAATCGACAACTAGGGGTGTTGAAAGTGATTGAAATATCGAATCAAGACCAGTTGAGGGTCGATTTGGACAAGAATCCTTGACATTGTTTGATAAAGTGGCAATCGAAAAGTGAGCAGTAACCATTTCACG                                                                                                                                                                                                                                                                           ]
[-] EMBL CD111050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTGATTGAAATATCGAATCAAGACCAGTTGAGGGTCGATTTGGACAAGAATCCTTGACATTGTTTGATAAAGTGGCAATCGAAAAGTGAGCAGTAACCATTTCACGATCGTCTACTACATCGCAGACCAAATCATCCCAATCAAGCATACCACCATCTCTAGCAACATTGATGCTGTGAACGACAATACGATCCTGTGGTCCGAGCTTCGGTAAAGTATGCCTAACTCTCCTCAAACCACTAAGAGTCAAGTCTCTAACCGTTAAGTTCCCTAAACCACAAGGAACCACGACCTTTGTGTCTCCAAAACAGACCGTCAACTTCATGTTCCATTTCTGGCAGTAATGACCTTCAAGAGACAGCTGTGGAAATTA]


>consensus_5453#0 CCAACCAGACTCGTAGATCACGACGGCGAGATAAGACATTTGAGAGCATTTCAAAGACAT TTGGTGAAAGTGTTCTTTGACAGTGCTTCGCTGTATCGTTTATGGTGATACTATTCAAAC AGGATTTATTGCACGAAACAGGAGAGCTTTTCATTTGTTCACATGTACTTGATGCTGTAT TGAAGCAAGTAGGTGGTGTCTGAGAAGCTGGAGAGGTTGTAAAACATTTCTTATTATTGT CGGAAGAGGATATTGCTGAAACACAATTAACTTTAGTGTTGGGATGCAGCGCCACATTGG AGTCATGGGAAGACTCATTCAGAAACCATTCTTGGATATCACCAGGGAACTGAGATGTAT GCGCTCCATTTGGTTGATGCAATCCACAGCTATCATTACTTAGATTTAAGCTTAAGTTAC TACTGCTTGTACTTCCATCTCCGATACGCAGAAGCCTGCTTGCGATATGACCATTGATAT CAGTTTGTCTTAATCCGATTCCCCAAGGAGGTGCGAGATTCAACCCACTATCTCTAAATT CACTAGCCCCGCTAGACTGGATGGGGCTATGAAATGAAGGCTCGAGGGCACTATCAGAAC ATAAATCGACAACTAGGGGTGTTGAAAGTGATTGAAATATCGAATCAAGACCAGTTGAGG GTCGATTTGGACAAGAATCCTTGACATTGTTTGATAAAGTGGCAATCGAAAAGTGAGCAG TAACCATTTCACGATCGTCTACTACATCGCAGACCAAATCATCCCAATCAAGCATACCAC CATCTCTAGCAACATTGATGCTGTGAACGACAATACGATCCTGTGGTCCGAGCTTCGGTA AAGTATGCCTAACTCTCCTCAAACCACTAAGAGTCAAGTCTCTAACCGTTAAGTTCCCTA AACCACAAGGAACCACGACCTTTGTGTCTCCAAAACAGACCGTCAACTTCATGTTCCATT TCTGGCAGTAATGACCTTCAAGAGACAGCTGTGGAAATTA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)