cluster # 5477

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Schistosoma mansoni
cluster # 5477 cluster # 5477 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5477#0 length = 513 sequences # 3

consensusID : consensus_5477#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 513
fasta sequence

                              [GGGAATTAAATAAGCCAAATACGAGAATGGATTTTGAATATGTATATTTCATGCACTCACCATTGATTTGAACAGGCAATCAAGGGGACGAAACAAGGAGGGATGAGAGAAGCGGATTTGAGAAGGCAAGTGAGCAAACTCAGTTTAATCAGGCGTTAATCGACATTTATAGTCACGCAAAAATAAGTTACTGACATATGATGAATGGGATAAGAAGTGCACGAACATACACTCATATAAAAACAGTCAAGGTTGATAAGCGAATAATTGACAAGGTCAAAATGTGACTCAATTAGAACGAATAAATTGACTTGTCCAGAAGCTAGAATACGTTGCGTGGTTTTAACATAGTAACCGACATTACGGTATGCATTCACTAGACTCAAATCAGAACGTATAGACACATGAAAGATCAAAACTTAATGGTAAAATTCTTTGAAGAACTCTTTAATCGATCGAACTGTTACGATCATAATGTGTGATCGATCTAGTGTCAGTAAAAAAATCAATTTT]

[+] EMBL CD088980             [GGGAATTAAATAAGCCAAATACGAGAATGGATTTTGAATATGTATATTTCATGCACTCACCATTGATTTGAACAGGCAATCAAGGGGACGAAACAAGGAGGGATGAGAGAAGCGGATTTGAGAAGGCAAGTGAGCAAACTCAGTTTAATCAGGCGTTAATCGACATTTATAGTCACGCAAAAATAAGTTACTGACATATGATGAATGGGATAAGAAGTGCACGAACATACACTCATATAAAAACAGTCAAGGTTGATAAGCGAATAATTGACAAGGTCAAAATGTGACTCAATTAGAACGAATAAATTGACTTGTCCAGAAGCTAGAATACGTTGCGTGGTTTTAACATAGTAACCGACATTACGGTATGCATTCACTAGACTCAAATCAGAACGTATAGACACATGAAAGATCAAAACTTAATGGTAAAATTCTTTGAAGAACTCTTTAATCGATCGAACTGTTACGATCATAATGTGTGATCGATCTAGTGTCAGTAAAAAAATCAATTTT]
[+] EMBL CD088940             [GGGAATTAAATAAGCCAAATACGAGAATGGATTTTGAATATGTATATTTCATGCACTCACCATTGATTTGAACAGGCAATCAAGGGGACGAAACAAGGAGGGATGAGAGAAGCGGATTTGAGAAGGCAAGTGAGCAAACTCAGTTTAATCAGGCGTTAATCGACATTTATAGTCACGCAAAAATAAGTTACTGACATATGATGAATGGGATAAGAAGTGCACGAACATACACTCATATAAAAACAGTCAAGGTTGATAAGCGAATAATTGACAAGGTCAAAATGTGACTCAATTAGAACGAATAAACTGACTTGTCCAGAAGCTAGAATACGTTACGTGGTTTTAACATAGTAACCGACATTACGGTATGCATTCACTAGACTCAAATCAGAACGTATAGACACATGAAAGATCAAAACTTAATGGTAAAATTCTTTGAAGAACTCTTTAATCGATCGAACTGTTACGATCATAATGTGTGATCGATCTAGTGTCAGTAAAAAAATCAATTTT]
[-] EMBL CD126738             [                                                                                            ACAAGGAGGGATGAGAGAAGCGGATTTGAGAAGGCAAGTGAGCAAACTCAGTTTAATCAGGCGTTAATCGACATTTATAGTCACGCAAAAATAAGTTACTGACATATGATG                                                                                                                                                                                                                                                                                                                      ]




>consensus_5477#0
GGGAATTAAATAAGCCAAATACGAGAATGGATTTTGAATATGTATATTTCATGCACTCAC
CATTGATTTGAACAGGCAATCAAGGGGACGAAACAAGGAGGGATGAGAGAAGCGGATTTG
AGAAGGCAAGTGAGCAAACTCAGTTTAATCAGGCGTTAATCGACATTTATAGTCACGCAA
AAATAAGTTACTGACATATGATGAATGGGATAAGAAGTGCACGAACATACACTCATATAA
AAACAGTCAAGGTTGATAAGCGAATAATTGACAAGGTCAAAATGTGACTCAATTAGAACG
AATAAATTGACTTGTCCAGAAGCTAGAATACGTTGCGTGGTTTTAACATAGTAACCGACA
TTACGGTATGCATTCACTAGACTCAAATCAGAACGTATAGACACATGAAAGATCAAAACT
TAATGGTAAAATTCTTTGAAGAACTCTTTAATCGATCGAACTGTTACGATCATAATGTGT
GATCGATCTAGTGTCAGTAAAAAAATCAATTTT

clustalw multiple alignements is not computed in this case