cluster # 548

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Schistosoma mansoni
cluster # 548 cluster # 548 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_548#0 length = 740 sequences # 2

consensusID : consensus_548#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 740
fasta sequence

                              [ACTCAAACGGGTTTGTCTTGCTTCATGGCTTTCTCGATAGACGCATTCAATATAAAAATGAGAAGATCAGTCTCGAATTTGACTCAAATCAGGGCTCTGTTATAGAACTATTTCTTTCCACTATCGAAAGTTTGTACACTGATTGCGGAGGTTTAGTTGTGGACACTCGTAACTGTCCTAATCCTAAGTGGAAAACATTTACCATCTGTGGTAGTTATGAGAGGCTGTATAGTTTGTTTAACAAGTTGCAGCACAGTAATTCCAATAAAAGTGTGCTTCTGACTACCCCATTGTTGAAGTCAATTCTGCATCGATTAACACGAGCTATAACGGATAGTGACAGTGTTTTGTTTTTTACGGCTATGCGAGAGCCGTTCACCATGCAAAGTGAAGCCCATAGACGCCTTACATTTACTCACTGGCCTCATATGGATTATCAATGGATAACGCCTTCCACCTTGTCTGAAGCTGGATTTTACTTCCCATTAAAATTCCCACTGGACATTGTATATTGTCTTGAATGCTCAGTTAGATTGTCATCTTGGGAACCAACCGACGAGCCATGGAGTGAACATATCAGACATTCACCGCAGTGCAGCTTTGTGTCATCTCCAAATTCGAAAAACATACCTAGTACATTTTCATGGTCAACGGAAACAGCACAAACTCATGCAATATCTGATGATCCTATCATGGTGCTTACAGCTTCTACGTCGACAGATTTTGTCACAACTTCAACA]

[-] EMBL CD157421             [ACTCAAACGGGTTTGTCTTGCTTCATGGCTTTCTCGATAGACGCATTCAATATAAAAATGAGAAGATCAGTCTCGAATTTGACTCAAATCAGGGCTCTGTTATAGAACTATTTCTTTCCACTATCGAAAGTTTGTACACTGATTGCGGAGGTTTAGTTGTGGACACTCGTAACTGTCCTAATCCTAAGTGGAAAACATTTACCATCTGTGGTAGTTATGAGAGGCTGTATAGTTTGTTTAACAAGTTGCAGCACAGTAATTCCAATAAAAGTGTGCTTCTGACTACCCCATTGTTGAAGTCAATTCTGCATCGATTAACACGAGCTATAACGGATAGTGACAGTGTTTTGTTTTTTACGGCTATGCGAGAGCCGTTCACCATGCAAAG                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD186694             [                                                                                                                                                                                                                                                                                                  TTGTTGAAGTCAATTCTGCATCGATTAACACGAGCTATAACGGATAGTGACAGTGTTTTGTTTTTTACGGCTATGCGAGAGCCGTTCACCATGCAAAGTGAAGCCCATAGACGCCTTACATTTACTCACTGGCCTCATATGGATTATCAATGGATAACGCCTTCCACCTTGTCTGAAGCTGGATTTTACTTCCCATTAAAATTCCCACTGGACATTGTATATTGTCTTGAATGCTCAGTTAGATTGTCATCTTGGGAACCAACCGACGAGCCATGGAGTGAACATATCAGACATTCACCGCAGTGCAGCTTTGTGTCATCTCCAAATTCGAAAAACATACCTAGTACATTTTCATGGTCAACGGAAACAGCACAAACTCATGCAATATCTGATGATCCTATCATGGTGCTTACAGCTTCTACGTCGACAGATTTTGTCACAACTTCAACA]




>consensus_548#0
ACTCAAACGGGTTTGTCTTGCTTCATGGCTTTCTCGATAGACGCATTCAATATAAAAATG
AGAAGATCAGTCTCGAATTTGACTCAAATCAGGGCTCTGTTATAGAACTATTTCTTTCCA
CTATCGAAAGTTTGTACACTGATTGCGGAGGTTTAGTTGTGGACACTCGTAACTGTCCTA
ATCCTAAGTGGAAAACATTTACCATCTGTGGTAGTTATGAGAGGCTGTATAGTTTGTTTA
ACAAGTTGCAGCACAGTAATTCCAATAAAAGTGTGCTTCTGACTACCCCATTGTTGAAGT
CAATTCTGCATCGATTAACACGAGCTATAACGGATAGTGACAGTGTTTTGTTTTTTACGG
CTATGCGAGAGCCGTTCACCATGCAAAGTGAAGCCCATAGACGCCTTACATTTACTCACT
GGCCTCATATGGATTATCAATGGATAACGCCTTCCACCTTGTCTGAAGCTGGATTTTACT
TCCCATTAAAATTCCCACTGGACATTGTATATTGTCTTGAATGCTCAGTTAGATTGTCAT
CTTGGGAACCAACCGACGAGCCATGGAGTGAACATATCAGACATTCACCGCAGTGCAGCT
TTGTGTCATCTCCAAATTCGAAAAACATACCTAGTACATTTTCATGGTCAACGGAAACAG
CACAAACTCATGCAATATCTGATGATCCTATCATGGTGCTTACAGCTTCTACGTCGACAG
ATTTTGTCACAACTTCAACA

clustalw multiple alignements is not computed in this case